CV712801
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_PSEA8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=dxs PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.876e-34 Identity = 85/194 (43.81%), Postives = 118/194 (60.82%), Query Frame = -2 Query: 189 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 767 GSFD++++ C+P M+VM PSDE EL ++ T D P+ RYPRG+G + P + P+E+GKG + G RVALL +G + A A+ + L TV D RF KPLD AL+R LA SHE+L+T+EE ++ GG GS V +FLA +GL V L LPD Y++H P++ LA+ GL + I V Sbjct: 438 GSFDISYLRCIPGMLVMTPSDEDELRKLLTTGYLFDG-PAAVRYPRGSGPNHPIDPDLQ--PVEIGKGVVRRRGGRVALLVFGVQL-----AEAMKVAESLDATVVDMRFVKPLDEALVRELAGSHELLVTIEENAVMGGAGSAVGEFLASEGL---EVPLLQLGLPDYYVEHAKPSEMLAECGLDAAGIEKAV 620
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_CYAP4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dxs PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.876e-34 Identity = 85/194 (43.81%), Postives = 114/194 (58.76%), Query Frame = -2 Query: 189 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGS-IGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 767 G +D+ ++ CLPNMV+MAP DEAEL M+ T D P RYPRGNG GV L PL +GK +L +G+ + +L YG+ V L A+ +L HG+ TV +ARF KPLD LI LA+ ++TVEEG IGGFGS V++ L +L V + +PD ++H +P AQ GLT + IA V Sbjct: 431 GMYDIAYLRCLPNMVLMAPKDEAELQQMLVTGINYMDGPIGLRYPRGNGYGVALMEEGWE-PLPIGKAEVLRQGDDLLMLAYGSMVYPTLQAAEILREHGIAATVVNARFAKPLDTELILPLAEKLGRVVTVEEGCLIGGFGSAVLEALQDQEIL---VPVTRIGIPDILVEHATPDQSKAQLGLTSAQIAERV 620
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_VIBPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio parahaemolyticus GN=dxs PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.407e-34 Identity = 83/200 (41.50%), Postives = 123/200 (61.50%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 G+FD++FM C+PNMV+MAPSDE E M+ T PS RYPRG+G+G E+ + LE+GKGR++ +GE+VA+L +GT + + L A+ L TVAD RF KPLD ALIR LA H+VL+T+EE +I GG G+ V++F+ + ++ + L LPD++I G+ + + GL I ++ L + Sbjct: 433 GAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHK-HTGPSAVRYPRGSGMGTEIE--KEFTALEIGKGRVVRKGEKVAILSFGTFLPNALEAAK-----NLNATVADMRFVKPLDEALIRQLADEHDVLVTLEENAIAGGAGAGVIEFMMKEKIIKPVLN---LGLPDKFIHQGTQEELHEELGLDAKGIEKSIAEYLAK 621
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_VIBHB (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=dxs PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.367e-34 Identity = 84/200 (42.00%), Postives = 122/200 (61.00%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 G+FD++FM C+PNMV+MAPSDE E M+ T PS RYPRG+G+G ++ LE+GKGRI+ +GE+VA+L +GT + + L A+ L TVAD RF KPLD ALIR LA H+VL+T+EE +I GG G+ V++F+ D ++ + L LPDR++ G+ + GL I ++ + L + Sbjct: 433 GAFDLSFMRCIPNMVIMAPSDENECRQMLYTGHK-HTGPSAVRYPRGSGMGTDIEKDFTA--LEIGKGRIVRKGEKVAILSFGTFLGNALEAA-----ENLNATVADMRFVKPLDEALIRQLAAEHDVLVTLEENAIAGGAGAGVIEFMMQDKIIKPVLN---LGLPDRFVPQGTQDELHEDLGLDAKGIEKSINDYLAK 621
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_THISH (1-deoxy-D-xylulose-5-phosphate synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dxs PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.093e-33 Identity = 83/194 (42.78%), Postives = 122/194 (62.89%), Query Frame = -2 Query: 189 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 767 GSFD++++ C+PN+ VMAP+DE E M++T +D P+ RYPRG G G L PG +P VGK ++ +G VALL +G + + LAA+ L++ TV + RF KPLD AL+R +A+ H++L+T+E+ + GG GS V + LA+ G+ TV L LPDR+ +HGS + L++AGL I A V Sbjct: 432 GSFDLSYLRCVPNLTVMAPADEDECRRMLSTGFHLDG-PAAVRYPRGKGPGAALDPGLDTLP--VGKAQLRRKGRGVALLAFGAVLPAALAAAEPLDA-----TVVNMRFVKPLDEALVREMAEGHDLLVTLEDNVVAGGAGSAVAESLAVQGI---TVPLLHLGLPDRFQEHGSREELLSEAGLDAEGILAAV 614
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_VIBCM (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=dxs PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.427e-33 Identity = 86/205 (41.95%), Postives = 128/205 (62.44%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL-----IEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 G+FD+++M C+PNM++MAP+DE E M+ T PS RYPRGNG+GVEL + LE+GKGR++ EGE+VA+L +GT + + L A+ L + TVAD RF KPLD ALI+ LA++H+VL+T+EE +I GG G+ V++FL + L + L LPD++I G+ + A+ GL + I + + L + Sbjct: 433 GAFDLSYMRCIPNMLIMAPADENECRQMLYTGHQ-HQGPSAVRYPRGNGMGVELE--SSFTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLNA-----TVADMRFVKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQLKPVLN---LGLPDQFIVQGTQEEMHAELGLDGAGIERAIRDYLAK 626
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_VIBCH (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio cholerae GN=dxs PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.427e-33 Identity = 86/205 (41.95%), Postives = 128/205 (62.44%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL-----IEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 G+FD+++M C+PNM++MAP+DE E M+ T PS RYPRGNG+GVEL + LE+GKGR++ EGE+VA+L +GT + + L A+ L + TVAD RF KPLD ALI+ LA++H+VL+T+EE +I GG G+ V++FL + L + L LPD++I G+ + A+ GL + I + + L + Sbjct: 433 GAFDLSYMRCIPNMLIMAPADENECRQMLYTGHQ-HQGPSAVRYPRGNGMGVELE--SSFTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLNA-----TVADMRFVKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQLKPVLN---LGLPDQFIVQGTQEEMHAELGLDGAGIERAIRDYLAK 626
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_VIBC3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=dxs PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.427e-33 Identity = 86/205 (41.95%), Postives = 128/205 (62.44%), Query Frame = -2 Query: 171 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRIL-----IEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 767 G+FD+++M C+PNM++MAP+DE E M+ T PS RYPRGNG+GVEL + LE+GKGR++ EGE+VA+L +GT + + L A+ L + TVAD RF KPLD ALI+ LA++H+VL+T+EE +I GG G+ V++FL + L + L LPD++I G+ + A+ GL + I + + L + Sbjct: 433 GAFDLSYMRCIPNMLIMAPADENECRQMLYTGHQ-HQGPSAVRYPRGNGMGVELE--SSFTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLNA-----TVADMRFVKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQLKPVLN---LGLPDQFIVQGTQEEMHAELGLDGAGIERAIRDYLAK 626
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_PSEPF (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=dxs PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.427e-33 Identity = 84/209 (40.19%), Postives = 122/209 (58.37%), Query Frame = -2 Query: 144 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGIPLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 767 GSFD++F+ C+P MV+M PSDE EL M+ T + P+ RYPRG G + + P+E+GKG + +G +VALL +G + L + L++ TV D RF KP+D AL+R +A SH++L+T+EE +I GG G V +FLA + +L + L LPD Y++H PA LA+ GL I A V RE LE+++ Sbjct: 441 GSFDLSFLRCIPGMVIMTPSDENELRKMLTTGHLYNG-PAAVRYPRGTGPNATIEKDLE--PIEIGKGVVRRQGSKVALLVFGVQMAEALKVAETLDA-----TVVDMRFVKPMDEALVREIANSHDLLVTIEENAIMGGAGGAVSEFLARENILKSVLH---LGLPDVYVEHAKPAQMLAECGLDEVGIEAAV-------RERLELLN 631
BLAST of CV712801 vs. ExPASy Swiss-Prot
Match: DXS_SYNJA (1-deoxy-D-xylulose-5-phosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dxs PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.864e-33 Identity = 83/195 (42.56%), Postives = 115/195 (58.97%), Query Frame = -2 Query: 189 GSFDVTFMACLPNMVVMAPSDEAELFHMVATAAAIDDRPSCFRYPRGNGIGVELPPGNKGI-PLEVGKGRILIEGERVALLGYGTAVQSCLAASALLESHGLRLTVADARFCKPLDHALIRSLAKSHEVLITVEEGSI-GGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATV 767 G +D+ ++ C+P MV+MAP DEAEL MV T P RYPRG G+GV P +G P+ +GK +L G V +L YG+ V L A+ +L+ HG+ TV +ARF KPLD LI LA+ +++TVEEG + GGFGS V + L LD D V L +PD +++H +P + LA+ GL IA + Sbjct: 438 GMYDIAYLRCIPEMVLMAPKDEAELQRMVVTGIQYTKGPIAMRYPRGAGVGV--PLAEEGWEPIPIGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISTTVVNARFAKPLDTELILPLAQQSRLVVTVEEGCLMGGFGSAVGEAL-LDA--DIRVPLLRLGVPDVWVEHATPEESLAELGLNSVGIAERI 627 The following BLAST results are available for this feature:
BLAST of CV712801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712801 ID=CV712801; Name=CV712801; organism=Citrus sinensis; type=EST; length=771bpback to top |