CV712490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41_DROME (Transmembrane protein 41 homolog OS=Drosophila melanogaster GN=CG8408 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.330e-17 Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = -2 Query: 436 IAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 723 + + R+ L NYMLFLR+TP LPN FINLASP++ +P HIF L T G+ P S I ++AG L + S + + + ++ +L +LP LLK K Sbjct: 218 VEEYRDSLFNYMLFLRMTPILPNWFINLASPVIGVPLHIFALGTFCGVAPPSVIAIQAGKTLQKMTSSSEAFSWTSMGILMACACASLLPGLLKNK 313
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: T41AB_DANRE (Transmembrane protein 41A-B OS=Danio rerio GN=tmem41ab PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.646e-17 Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = -2 Query: 436 ELVACIQ--IAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 744 E VA +Q + + R L ++LFLR P PN F+N+ SPI++IP IFF + LIGLIP ++I V G L ++ S+ D++ + TLL L LI V +LP L R+ Sbjct: 148 EKVAMLQRMVEENRSSLFFFLLFLRFFPMTPNWFLNVTSPILNIPIPIFFFSILIGLIPYNFICVHTGAVLSEINSLDDIFSWFTLLQLLLIACVALLPGALIRR 252
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: T41AA_DANRE (Transmembrane protein 41A-A OS=Danio rerio GN=tmem41aa PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.293e-15 Identity = 39/97 (40.21%), Postives = 60/97 (61.86%), Query Frame = -2 Query: 436 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 726 ++ + R L ++LFLR P PN F+N+ SPI++IP +FF+A IGL+P ++I V+ G L + S+ DL+ + +L L L V +LP L RK Sbjct: 162 KVEENRSSLFFFLLFLRFFPMSPNWFLNMTSPILNIPVTLFFMAVFIGLMPYNFICVQTGSMLSQISSLDDLFSWSVVLKLLLTACVALLPGALIRK 258
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41_CAEEL (Transmembrane protein 41 homolog OS=Caenorhabditis elegans GN=tag-175 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14 Identity = 36/96 (37.50%), Postives = 61/96 (63.54%), Query Frame = -2 Query: 436 IAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 723 ++K R+ LNYM+FLR+TP +PN IN+ASP++D+P FF T +G+ P S++ ++AG L L + + ++++L + + P LLK+K Sbjct: 147 LSKHRDDFLNYMIFLRVTPIVPNWLINIASPVLDVPLAPFFWGTFLGVAPPSFLYIQAGSTLEQLSHTSVAWSWSSIVLLTGSAILSLAPILLKKK 242
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41A_MOUSE (Transmembrane protein 41A OS=Mus musculus GN=Tmem41a PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.481e-14 Identity = 40/97 (41.24%), Postives = 64/97 (65.98%), Query Frame = -2 Query: 439 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILP-TLLKR 726 ++ + R L ++LFLR+ P PN F+NL++PI++IP FF + LIGLIP ++I V+ G L L S+ L+ ++T+L L I V ++P TL+K+ Sbjct: 145 KVEENRNSLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTGSILSTLTSLDALFSWETVLKLLAIALVALVPGTLIKK 241
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41A_HUMAN (Transmembrane protein 41A OS=Homo sapiens GN=TMEM41A PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13 Identity = 39/97 (40.21%), Postives = 62/97 (63.92%), Query Frame = -2 Query: 439 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILP-TLLKR 726 ++ + R L ++LFLR+ P PN F+NL++PI++IP FF + LIGLIP ++I V+ G L L S+ L+ + T+ L I V ++P TL+K+ Sbjct: 145 KVEENRNSLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTGSILSTLTSLDALFSWDTVFKLLAIAMVALIPGTLIKK 241
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41A_BOVIN (Transmembrane protein 41A OS=Bos taurus GN=TMEM41A PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.224e-13 Identity = 44/117 (37.61%), Postives = 70/117 (59.83%), Query Frame = -2 Query: 439 IFRFEFASFC*NELVACIQ--IAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILP-TLLKR 780 +F + F + VA +Q + + R L ++LFLR+ P PN F+NL++PI++IP FF + LIGLIP ++I V+ G L L S+ L+ ++T L I V ++P TL+K+ Sbjct: 125 VFGKQLVVFYFPDKVALLQKKVEENRNGLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQTGSILSTLTSLDALFSWETAFKLLAIALVALVPGTLIKK 241 The following BLAST results are available for this feature:
BLAST of CV712490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712490 ID=CV712490; Name=CV712490; organism=Citrus sinensis; type=EST; length=790bpback to top |