CV712490
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: Y4958_ARATH (Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana GN=At4g09580 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.088e-44 Identity = 86/101 (85.15%), Postives = 97/101 (96.04%), Query Frame = -2 Query: 424 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRKRIYE 726 +IAKRR++LLNYMLFLRITP+LPNLFINL+SPIVDIPFH+FFLATL+GL+PASYITVRAGLALGDL+SVKDLYDFKTL VLFLIGS+ I P LLKRKR+YE Sbjct: 187 EIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLMPASYITVRAGLALGDLRSVKDLYDFKTLSVLFLIGSISIFPALLKRKRVYE 287
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41_DICDI (Transmembrane protein 41 homolog OS=Dictyostelium discoideum GN=DDB_G0275543 PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 9.008e-23 Identity = 44/96 (45.83%), Postives = 76/96 (79.17%), Query Frame = -2 Query: 436 IAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 723 ++++R+ LLNY++FLRITP LPN FINLASP++D+P H F + T IG++PA+++ V+AG+ + ++Q+ D++D K++L + + + ILPTL+++K Sbjct: 235 LSQKRDNLLNYIVFLRITPFLPNWFINLASPLLDVPIHTFAIGTFIGIMPATFLAVKAGIQIQNIQNPSDIFDLKSILTMAALALLSILPTLIQKK 330
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41B_CHICK (Transmembrane protein 41B OS=Gallus gallus GN=TMEM41B PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.042e-19 Identity = 39/97 (40.21%), Postives = 66/97 (68.04%), Query Frame = -2 Query: 436 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 726 Q+ + RE L+NY++FLRITP LPN FIN+ SP++++P +FF+ T +G+ P S++ ++AG L L + + + +L VL ++ + ILP L ++K Sbjct: 167 QVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSLFVLMILAILSILPALFQKK 263
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41B_DANRE (Transmembrane protein 41B OS=Danio rerio GN=tmem41b PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.031e-18 Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = -2 Query: 436 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 726 Q+ K RE L+NY++FLRITP LPN FIN+ SP++++P +FFL T +G+ P S++ + AG L L + + + +LLVL ++ V ILP ++K Sbjct: 180 QVDKHREHLINYIIFLRITPFLPNWFINITSPVINVPLGVFFLGTFLGVAPPSFVAINAGTTLYKLTTAGEAVSWNSLLVLGVLAVVSILPVCFQKK 276
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41B_XENTR (Transmembrane protein 41B OS=Xenopus tropicalis GN=tmem41b PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.758e-18 Identity = 37/97 (38.14%), Postives = 67/97 (69.07%), Query Frame = -2 Query: 436 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 726 Q+ + R+ L+NY++FLRITP LPN FIN+ SP++++P +FFL T IG+ P S++ ++AG L L + + + ++++L ++ + ILP + ++K Sbjct: 176 QVERHRDHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFLGTFIGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSVIILMVLAVLSILPAIFQKK 272
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41B_XENLA (Transmembrane protein 41B OS=Xenopus laevis GN=tmem41b PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.758e-18 Identity = 37/97 (38.14%), Postives = 67/97 (69.07%), Query Frame = -2 Query: 436 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 726 Q+ + R+ L+NY++FLRITP LPN FIN+ SP++++P +FFL T IG+ P S++ ++AG L L + + + ++++L ++ + ILP + ++K Sbjct: 176 QVERHRDHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFLGTFIGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSVIILMVLAVLSILPAIFQKK 272
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41B_HUMAN (Transmembrane protein 41B OS=Homo sapiens GN=TMEM41B PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.296e-18 Identity = 36/97 (37.11%), Postives = 66/97 (68.04%), Query Frame = -2 Query: 436 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 726 Q+ + RE L+NY++FLRITP LPN FIN+ SP++++P +FF+ T +G+ P S++ ++AG L L + + + ++ +L ++ + ILP + ++K Sbjct: 189 QVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSIFILMILAVLSILPAIFQKK 285
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41B_RAT (Transmembrane protein 41B OS=Rattus norvegicus GN=Tmem41b PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.999e-18 Identity = 36/97 (37.11%), Postives = 66/97 (68.04%), Query Frame = -2 Query: 436 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 726 Q+ + RE L+NY++FLRITP LPN FIN+ SP++++P +FF+ T +G+ P S++ ++AG L L + + + ++ +L ++ + ILP + ++K Sbjct: 189 QVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLYQLTTAGEAVSWNSVFILMILALLSILPAIFQKK 285
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41B_MOUSE (Transmembrane protein 41B OS=Mus musculus GN=Tmem41b PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.725e-18 Identity = 35/97 (36.08%), Postives = 66/97 (68.04%), Query Frame = -2 Query: 436 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 726 Q+ + RE L+NY++FLRITP LPN FIN+ SP++++P +FF+ T +G+ P S++ ++AG L L + + + ++ +L ++ + ILP + +++ Sbjct: 189 QVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLHQLTTAGEAVSWSSVFILMVLALLSILPAIFQKQ 285
BLAST of CV712490 vs. ExPASy Swiss-Prot
Match: TM41B_PONAB (Transmembrane protein 41B OS=Pongo abelii GN=TMEM41B PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.139e-17 Identity = 35/97 (36.08%), Postives = 65/97 (67.01%), Query Frame = -2 Query: 436 QIAKRREKLLNYMLFLRITPSLPNLFINLASPIVDIPFHIFFLATLIGLIPASYITVRAGLALGDLQSVKDLYDFKTLLVLFLIGSVIILPTLLKRK 726 Q+ + RE L+NY++FLRITP LPN FIN+ SP++++P +FF+ T +G+ P S++ ++AG L + + + ++ +L ++ + ILP + ++K Sbjct: 189 QVERHREHLINYIIFLRITPFLPNWFINITSPVINVPLKVFFIGTFLGVAPPSFVAIKAGTTLHQPTTAGEAVSWNSIFILMILAVLSILPAIFQKK 285 The following BLAST results are available for this feature:
BLAST of CV712490 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712490 ID=CV712490; Name=CV712490; organism=Citrus sinensis; type=EST; length=790bpback to top |