CX301564
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301564 vs. ExPASy Swiss-Prot
Match: RL18_DICDI (60S ribosomal protein L18 OS=Dictyostelium discoideum GN=rpl18 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.639e-28 Identity = 65/147 (44.22%), Postives = 90/147 (61.22%), Query Frame = 1 Query: 16 HDAFFYYFSFIGRRADSKFADTIVKRVRMSRINNAPISLSRLVRYVKG-KEDKIAVIVGTVTDDPRLLEVPAVKVAALRFTETARARILKAGGEVLTLDQLALRAPKGSNTILLRGRKSVRESIKYFGHRTSVNNPHTHDGVKPRTI 453 H + F+ RR +SKF ++KR+ ++ N P+S+SR+ +K K KIAV VGTV DD RLL+ P + V ALRFTETAR+RI+KAGG+ L+ DQ AL P+G+NT L++G RE K+FG + H V+ I Sbjct: 25 HALLVKLYRFLARRTNSKFNKVVLKRLLQTKTNRPPVSISRIANLMKDRKSGKIAVCVGTVVDDERLLDCPKLTVCALRFTETARSRIVKAGGKALSFDQFALVRPRGNNTFLIKGVTKAREVYKHFGRAPGLPGSHARPYVRSEGI 171
BLAST of CX301564 vs. ExPASy Swiss-Prot
Match: RL18_TRYCR (60S ribosomal protein L18 OS=Trypanosoma cruzi GN=RPL18 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.003e-27 Identity = 68/128 (53.12%), Postives = 87/128 (67.97%), Query Frame = 1 Query: 37 FSFIGRRADSKFADTIVKRVRMSRINNAPISLSRL--------VRYVKGKEDKIAVIVGTVTDDPRLLEVPAVKVAALRFTETARARILKAGGEVLTLDQLALRAPKGSNTILLRGRKSVRESIKYFG 396 + F+ +R +S F + +R+ SR N APISLSR+ V KGK+ IAVIVG V DD R+ +PA++V ALRF+++AR RI AGGE LT DQLA+ AP G NT LLRGRKS RES+K+FG Sbjct: 33 YKFLAQRTNSAFNKLVHQRLLKSRSNRAPISLSRIAVCMKRKSVWLEKGKKAPIAVIVGDVLDDVRMARIPALRVCALRFSKSARERITGAGGECLTFDQLAMVAPTGKNTFLLRGRKSGRESVKHFG 160
BLAST of CX301564 vs. ExPASy Swiss-Prot
Match: RL18_ANOGA (60S ribosomal protein L18 OS=Anopheles gambiae GN=RpL18 PE=3 SV=3) HSP 1 Score: 121.709 bits (304), Expect = 2.918e-27 Identity = 61/140 (43.57%), Postives = 97/140 (69.29%), Query Frame = 1 Query: 37 FSFIGRRADSKFADTIVKRVRMSRINNAPISLSRLVRYVK--GKEDK-IAVIVGTVTDDPRLLEVPAVKVAALRFTETARARILKAGGEVLTLDQLALRAPKGSNTILLRGRKSVRESIKYFGHRTSVNNPHTHDGVKPR 447 + F+ RR KF +++R+ MSR N+ P+SL+R+ +K GK++K +AV++GTVT+D R+++VP + V ALR T+ AR RILK GG++ T DQLAL +P G NT+L++G+++ RE K+FG V + +T V+ + Sbjct: 32 YRFLYRRTKKKFNKIVMRRLFMSRTNHPPMSLNRVAHLMKLRGKDEKSVAVVIGTVTNDVRMMDVPKLNVCALRVTDKARQRILKNGGKIYTFDQLALLSPTGRNTVLMQGKRTAREVFKHFGRAPGVPHSNTRPYVQSK 171
BLAST of CX301564 vs. ExPASy Swiss-Prot
Match: RL18_AEDAE (60S ribosomal protein L18 OS=Aedes aegypti GN=RpL18 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.489e-27 Identity = 67/140 (47.86%), Postives = 92/140 (65.71%), Query Frame = 1 Query: 37 FSFIGRRADSKFADTIVKRVRMSRINNAPISLSRLVRYVK--GK-EDKIAVIVGTVTDDPRLLEVPAVKVAALRFTETARARILKAGGEVLTLDQLALRAPKGSNTILLRGRKSVRESIKYFGHRTSVNNPHTHDGVKPR 447 + F+ RR KF I++R+ MSR N PISLSR+ + +K GK E+ IAV+VGTVT+D R L P + V ALR TE AR RILK GG++ T DQLAL AP G NT+L++G ++ RE+ +FG V + +T V+ + Sbjct: 32 YRFLYRRTHKKFNKIILRRLFMSRTNQPPISLSRVAKLMKLRGKDENTIAVVVGTVTNDDRKLYCPKMNVCALRVTEKARERILKWGGKIYTFDQLALVAPTGKNTVLMQGERTAREAFTHFGRAPGVPHSNTRPYVQSK 171
BLAST of CX301564 vs. ExPASy Swiss-Prot
Match: RL18_THEPA (60S ribosomal protein L18 OS=Theileria parva GN=RPL18 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.109e-26 Identity = 61/126 (48.41%), Postives = 83/126 (65.87%), Query Frame = 1 Query: 37 FSFIGRRADSKFADTIVKRVRMSRINNAPISLSRLVRYVKGKEDKIAVIVGTVTDDPRLLEVPAVKVAALRFTETARARILKAGGEVLTLDQLALRAPKGSNTILLRGRKSVRESIKYFGHRTSVN 414 + F+ RR D F ++KR+ M R AP+SLS+L ++++ + D AV+VGTVT+D R+ VP + V ALR TETAR RIL +GGEVLT DQL R+P GS LLRG RE++K+F + N Sbjct: 33 YKFLSRRTDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEKRPDNTAVVVGTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHFRNEVKGN 158
BLAST of CX301564 vs. ExPASy Swiss-Prot
Match: RL18_LEIMA (60S ribosomal protein L18 OS=Leishmania major GN=RPL18-A PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.213e-26 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 1 Query: 37 FSFIGRRADSKFADTIVKRVRMSRINNAPISLSRL--------VRYVKGKEDKIAVIVGTVTDDPRLLEVPAVKVAALRFTETARARILKAGGEVLTLDQLALRAPKGSNTILLRGRKSVRESIKYFG 396 + F+ +R S F + +R+ SR N APISLSR+ V K K IAV+VG V DD R+ +PA++V ALRF+++AR I+ AGGE LT DQLA+ AP G NT LLRGRKS RES+++FG Sbjct: 33 YKFLAKRTSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHFG 160
BLAST of CX301564 vs. ExPASy Swiss-Prot
Match: RL18_THEAN (60S ribosomal protein L18 OS=Theileria annulata GN=RPL18 PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.226e-25 Identity = 59/126 (46.83%), Postives = 81/126 (64.29%), Query Frame = 1 Query: 37 FSFIGRRADSKFADTIVKRVRMSRINNAPISLSRLVRYVKGKEDKIAVIVGTVTDDPRLLEVPAVKVAALRFTETARARILKAGGEVLTLDQLALRAPKGSNTILLRGRKSVRESIKYFGHRTSVN 414 F F+ RR D F ++KR+ M R AP+SLS+L ++++ + + AV++GTVT D R+ VP + V ALR TETAR RIL +GGEVLT DQL R+P G LLRG RE++K+F + N Sbjct: 33 FKFLARRTDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHMESRPNNTAVVIGTVTSDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKAREAVKHFRNEVKGN 158
BLAST of CX301564 vs. ExPASy Swiss-Prot
Match: RL18_SALSA (60S ribosomal protein L18 OS=Salmo salar GN=rpl18 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.964e-17 Identity = 51/131 (38.93%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 70 FADTIVKRVRMSRINNAPISLSRLVRYVK--GKEDKIAVIVGTVTDDPRLLEVPAVKVAALRFTETARARILKAGGEVLTLDQLALRAPKGSNTILLRGRKSVRESIKYFGHRTSVNNPHTHDGVKPRTIS 456 F +++R+ MSR + P+S+SR++R +K G+E++ AV+VGTVTDD R+ E+P +KV+AL+ T R RILK +++ LAL AP ++LL ++ R+ ++F + S+ PHT KP +S Sbjct: 42 FNKVVLRRLFMSRTHRPPMSVSRMIRKMKLPGRENRTAVVVGTVTDDVRIHEIPNLKVSALKITRRNRTRILKF-VQIMRFVGLALAAPNRQKSVLLSAPRNARDVSRHFANAPSI--PHT----KPYVLS 165
BLAST of CX301564 vs. ExPASy Swiss-Prot
Match: RL18_PIG (60S ribosomal protein L18 (Fragment) OS=Sus scrofa GN=RPL18 PE=3 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 6.976e-13 Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 1 Query: 43 FIGRRADSKFADTIVKRVRMSRINNAPISLSRLVRYVK--GKEDKIAVIVGTVTDDPRLLEVPAVKVAALR 249 F+ RR +S F ++KR+ MSR N P+SLSR+ R +K G+E K AV+VGT+TDD R EVP +KV ALR Sbjct: 34 FLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMXRKMKLPGREGKTAVVVGTITDDVRFQEVPKLKVCALR 104 The following BLAST results are available for this feature:
BLAST of CX301564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301564 ID=CX301564; Name=CX301564; organism=Citrus sinensis; type=EST; length=609bpback to top |