CX301561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.657e-28 Identity = 63/160 (39.38%), Postives = 107/160 (66.88%), Query Frame = 3 Query: 42 DCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 521 D +D K+ T++LRG ++ +++E+ER ++D++ V R +++ K++PGGGA E +S L++ + S+ G E+ EA A A + IPRTLA+N G++ I ++ L+ +H GE A G+D TG + DM+E + + VK Q ++A EAA M+LRIDD+++ Sbjct: 363 DVEDAKSVTLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPGGGAPETELSLQLREFADSVGGREQLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLRSRHDGGEFA-AGLDAYTGEVIDMEEEGVVEPLRVKTQAIESATEAAVMILRIDDVIA 521
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28 Identity = 66/159 (41.51%), Postives = 101/159 (63.52%), Query Frame = 3 Query: 45 CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 521 CKDPKA T+L+RG ++ +++E ER ++DA+ V +++ K+V GGGA E+ V+ L+ + +EG E+ EA A A E IPRTLA+N G++ I + L+ KH +G+ GID G + DM E + + VK Q +A EAA M+LRIDD+++ Sbjct: 368 CKDPKAVTILIRGGTEHVVDEAERAIEDAIGVVAAALEDGKVVAGGGAPEVEVARQLRDFADGVEGREQLAVEAFADALEIIPRTLAENSGLDPIDVLVQLRAKHEDGQ-VTAGIDVYDGDVKDMLEEGVVEPLRVKTQALASATEAAEMILRIDDVIA 525
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28 Identity = 67/171 (39.18%), Postives = 105/171 (61.40%), Query Frame = 3 Query: 45 CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 557 CK+PKA ++L+RG + +++EVER L DA+ V ++ K + GGGA E ++ L + ++S+ G E+ EA A A E IPRTLA+N G++ I T+ L+ +H G + +G+D + + DMK + D VK ++A+E A M+LRIDD+++ KK P SGQ Sbjct: 363 CKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAEHEKGRIS-VGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIA--SKKSTPPSGQ 530
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.731e-28 Identity = 65/164 (39.63%), Postives = 98/164 (59.76%), Query Frame = 3 Query: 48 KDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 539 K+PK+ T+LLRG + L++E ER+L DA+SV + I + K+V GGGA E V+ L + +S + G + EA A A EA+P+ LA N G + I + L+ H EN W G+D +TG I DM + + VK K A E A ++LRIDD+++ K+++ Sbjct: 374 KNPKSVTILLRGGFERLVDEAERSLHDALSVVADAIMDGKIVAGGGAVEAEVAKVLYEYASKLPGKTQLAVEAFARAVEALPQALAHNAGHDPIEVLVKLRSAHEKPENKWYGVDLDTGEIVDMWSRGVLEPMRVKLNALKAATEVASLILRIDDVIAARKEEE 537
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: THSA_METTH (Thermosome subunit alpha OS=Methanobacterium thermoautotrophicum GN=thsA PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 5.011e-27 Identity = 62/160 (38.75%), Postives = 105/160 (65.62%), Query Frame = 3 Query: 42 DCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 521 +C+DPKA +++LRG++K + E+ER L+DA+ V + +++ ++V GGGA E+ ++ L++ + +I G E+ A A A E +P+TLA+N G++ I + L+ H E+ ++GID G I DMKE + + VK Q ++A EAA M+LRIDD+++ Sbjct: 358 ECRDPKAISIILRGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGGAPEVEIARKLREYADTISGREQLAVSAFADALEIVPKTLAENAGLDSIDVLVDLRAAHE--ESPYMGIDVFDGNIVDMKEAGVIEPQRVKKQAIQSAAEAAEMILRIDDMIA 515
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPG_ENCCU (T-complex protein 1 subunit gamma OS=Encephalitozoon cuniculi GN=CCT3 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.011e-27 Identity = 67/159 (42.14%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 45 CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGV-NVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 518 C PKAC+V++RG +KD+L+E+ERN DA+ VA++I +PKL PGGGA E+ ++ L Q + E +E + A A IP L +N GV N + +T L+ KH G ++ G++G TG I D ++ + + Y VK+Q K+A+EA LLRID I+ Sbjct: 361 CAHPKACSVVIRGPTKDILDELERNFMDAVKVAKSIFISPKLCPGGGAAEMAMAHELMQSAGDNE-VEAEVFSRMASALTIIPSILLENSGVFNPLEAITLLEQKHKEG--SFYGVNGTTGEIVDTRD-LVLEPYAVKSQCIKSAVEAVSQLLRIDGII 515
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 6.545e-27 Identity = 66/175 (37.71%), Postives = 107/175 (61.14%), Query Frame = 3 Query: 45 CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSK 569 CK+PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K+V GGA E+ +S L + + + G E+ EA A A + IPRTLA+N G++ I T+ + H + IG+D G +DM E + V Q K+A EAA M+LRIDD+++ K ++ G+ S+ Sbjct: 366 CKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEGGKGGSE 539
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 62/162 (38.27%), Postives = 102/162 (62.96%), Query Frame = 3 Query: 45 CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 530 CK+PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K++P GGA E+ ++ L + + + G E+ EA A A + IPRTLA+N G++ + T+ + H + IG+D G +DM E + V Q K+A EAA M+LRIDD+++ K Sbjct: 366 CKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIELAIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAHKE-KGPTIGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 65/175 (37.14%), Postives = 107/175 (61.14%), Query Frame = 3 Query: 45 CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSK 569 CK+PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K+V GGA E+ ++ L + + + G E+ EA A A + IPRTLA+N G++ I T+ + H + IG+D G +DM E + V Q K+A EAA M+LRIDD+++ K ++ G+ S+ Sbjct: 366 CKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEGGKGGSE 539
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26 Identity = 65/176 (36.93%), Postives = 105/176 (59.66%), Query Frame = 3 Query: 45 CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKP 572 CK+PKA T+L+RG ++ +++EVER L+DA+ V ++++++ ++P GGA E+ ++ L + + + G E E A A + IP+TLA+N G++ + + + +H N IGID G +DM E I + VK Q K+A EAA M+LRIDD+++ K P GQ P Sbjct: 366 CKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKN-RGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAA--KATKPEGGQGGGMP 538 The following BLAST results are available for this feature:
BLAST of CX301561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301561 ID=CX301561; Name=CX301561; organism=Citrus sinensis; type=EST; length=708bpback to top |