CX301561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 8.468e-59 Identity = 109/178 (61.24%), Postives = 137/178 (76.97%), Query Frame = 3 Query: 27 FGTRVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 557 F C++PKAC++LLRGASKD+LNE+ERNL DA+ VARN++ NPKLVPGGGA E+ ++ L + S IEG+++WP++A A A E IPRTLAQNCG +V+R MT L+ KHAN E + GIDGNTG I DM+E +WD +VK QT KT+IEA CMLLRIDDIVSGIKK + G+GQ Sbjct: 362 FSFMTKCENPKACSILLRGASKDVLNEIERNLHDALGVARNVMVNPKLVPGGGAIEMELACRLMEFSQKIEGMQQWPFKALAGALEVIPRTLAQNCGADVVRVMTELRAKHANDKEGLYWGIDGNTGKIRDMRESNVWDPISVKQQTLKTSIEATCMLLRIDDIVSGIKKDKRGGAGQ 539
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.349e-55 Identity = 101/176 (57.39%), Postives = 137/176 (77.84%), Query Frame = 3 Query: 27 FGTRVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSG 554 F +C++P+AC+++LRGASKD+LNE+ERNL D ++VA+NI NPKLVPGGGA E+ VS+ L++ SSSIEG+ + P+ A A A EAIP+TLAQNCGV+V+R +T L+ KH N +IGI+GN+G I+DM E +W+ VK Q +KTAIE+ACMLLRIDD+VSG+KK++ G Sbjct: 363 FTFMTECENPEACSIILRGASKDVLNEMERNLHDCLAVAKNIFVNPKLVPGGGAIEMEVSSHLEKISSSIEGLHQLPFRAVAYALEAIPKTLAQNCGVDVVRNITELRAKHNQEGNKFIGIEGNSGKITDMGEANVWEPIAVKLQVYKTAIESACMLLRIDDVVSGLKKQKVAKGG 538
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.680e-55 Identity = 101/163 (61.96%), Postives = 129/163 (79.14%), Query Frame = 3 Query: 45 CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKK 533 CK+PKACT+LLRG SKD++NEVERNLQDAM+VARN+ +PKL PGGGATE+ VS L +K+ SIEG+ +WPY A A A E IPRTL QNCG N I+ +T L+ KHA G++++ GIDG TG + DM E +W+ VK Q+ KTAIE+AC+LLR+DDIVSG++K Sbjct: 364 CKNPKACTILLRGPSKDIINEVERNLQDAMAVARNVFFHPKLSPGGGATEMAVSVRLAEKARSIEGVAQWPYRAVADAIEIIPRTLVQNCGANPIKALTELRAKHAEGQHSF-GIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIVSGVRK 525
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPG_XENLA (T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.399e-53 Identity = 103/185 (55.68%), Postives = 134/185 (72.43%), Query Frame = 3 Query: 42 DCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHA-NGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEAD 593 DCKDPKACT++LRGASK++L EVERNLQDAM V RN++ +P LVPGGGA+E++V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G W G+DG G ++DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK Q + P+ +A+ Sbjct: 364 DCKDPKACTIVLRGASKEILAEVERNLQDAMQVCRNVVIDPYLVPGGGASEMSVAHILTEKSKTMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRILTSLRAKHTQEGCQTW-GVDGEAGVLADMKELGIWEPLAVKLQTYKTAVETAILLLRIDDIVSGHKKKGEDHGRQPAAAPEAPQQAE 547
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPG_RAT (T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.387e-53 Identity = 103/180 (57.22%), Postives = 131/180 (72.78%), Query Frame = 3 Query: 42 DCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 557 DCKDPKACT+LLRGASK++L+EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G++G TG + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 365 DCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQNRQTGAPDAGQ 544
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPG_PONAB (T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.387e-53 Identity = 103/180 (57.22%), Postives = 131/180 (72.78%), Query Frame = 3 Query: 42 DCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 557 DCKDPKACT+LLRGASK++L+EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G++G TG + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 365 DCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.387e-53 Identity = 103/180 (57.22%), Postives = 131/180 (72.78%), Query Frame = 3 Query: 42 DCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 557 DCKDPKACT+LLRGASK++L+EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G++G TG + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 365 DCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQESCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQNRQTGAPDAGQ 544
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPG_HUMAN (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4) HSP 1 Score: 208.764 bits (530), Expect = 2.387e-53 Identity = 103/180 (57.22%), Postives = 131/180 (72.78%), Query Frame = 3 Query: 42 DCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 557 DCKDPKACT+LLRGASK++L+EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G++G TG + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 365 DCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.944e-53 Identity = 102/180 (56.67%), Postives = 131/180 (72.78%), Query Frame = 3 Query: 42 DCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 557 +CKDPKACT+LLRGASK++L+EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G++G TG + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 365 ECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPG_MACFA (T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.020e-52 Identity = 101/180 (56.11%), Postives = 131/180 (72.78%), Query Frame = 3 Query: 42 DCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 557 +CKDPKACT+LLRGASK++L+EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR +T+L+ KH G++G TG + D+KE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 365 ECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDVKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544 The following BLAST results are available for this feature:
BLAST of CX301561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX301561 ID=CX301561; Name=CX301561; organism=Citrus sinensis; type=EST; length=708bpback to top |