CX301561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23 Identity = 59/160 (36.88%), Postives = 93/160 (58.13%), Query Frame = 3 Query: 45 CKDP-KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 521 C P K T+++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + A A A E IP TLA+N G+N I T+T L+ +HA GE GI+ G IS++ E + V A E +L+IDD+V+ Sbjct: 379 CTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-TGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 7.488e-23 Identity = 59/160 (36.88%), Postives = 93/160 (58.13%), Query Frame = 3 Query: 45 CKDP-KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 521 C P K T+++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + A A A E IP TLA+N G+N I T+T L+ +HA GE GI+ G IS++ E + V A E +L+IDD+V+ Sbjct: 379 CTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-TGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 53/157 (33.76%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 45 CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 515 C + KA T+ +RG +K +++E +R L DA+ V RN++++ ++V GGG+ EL + + +++ I+GIE++ + A A A E+IP LA+N G+ I ++ L+ K + +GID +DMKE K+ + K + A + M+L+IDD+ Sbjct: 376 CPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 59/160 (36.88%), Postives = 93/160 (58.13%), Query Frame = 3 Query: 45 CKDP-KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 521 C P K T+++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + A A A E IP TLA+N G+N I T+T L+ +HA GE GI+ G IS++ E + V A E +L+IDD+V+ Sbjct: 379 CASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-AGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 107.071 bits (266), Expect = 9.780e-23 Identity = 59/160 (36.88%), Postives = 93/160 (58.13%), Query Frame = 3 Query: 45 CKDP-KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 521 C P K T+++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + A A A E IP TLA+N G+N I T+T L+ +HA GE GI+ G IS++ E + V A E +L+IDD+V+ Sbjct: 379 CASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKT-AGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.277e-22 Identity = 61/184 (33.15%), Postives = 103/184 (55.98%), Query Frame = 3 Query: 48 KDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEADAD 599 K+PK+ ++L+RG + +++E ER L+DA+ ++I++ + V GGGA E+ ++ L++ + + G E+ EA A A E + LA+N G++ I + L+ H N N W G++ TG DM + + + VK K A EA ++LRIDDIV+ KK G + K + E ++ D Sbjct: 373 KNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAIKAATEAVTLVLRIDDIVAAGKK----GGSEPGGKKEKEEKSSED 552
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22 Identity = 58/175 (33.14%), Postives = 97/175 (55.43%), Query Frame = 3 Query: 45 CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG--IKKKQAPGSGQAP 563 C K CT++LRG + + EVER+L DA+ + ++ +KN +V GGGA E+ +S L+ S +I G ++ A A + E IPR L N G + + L+ +HA GE W G+D ++ +++ E +W+ VK+ +A EAA ++L +D+ + ++ QAP P Sbjct: 369 CPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEMELSKYLRDYSLTISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILNKLRMQHAKGE-MWAGVDMDSEGVANNFEKFVWEPSTVKSNAILSATEAATLILSVDETIKNEPSQQPQAPQGALPP 542
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22 Identity = 58/170 (34.12%), Postives = 96/170 (56.47%), Query Frame = 3 Query: 27 FGTRVD-------CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 515 FGT D CK+ +A T+ +RG +K ++ E +R+L DA+ V RN+I++ ++V GGGA E + + + Q++ +E++ A A A E IP L++N G+N I+TMT ++ + N +GID +DMK+ + + K Q A + M+L+IDDI Sbjct: 364 FGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAETSCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDI 533
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22 Identity = 55/172 (31.98%), Postives = 98/172 (56.98%), Query Frame = 3 Query: 42 DCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 557 DC + A T+ +RG +K ++ E +R++ DA+ V RN+I++ +++ GGG++E++ + + I IE++ A A A +AIP LA+N G+ I +++ ++ +N +GID N +DMK ++D K Q F A + M+L+IDDI+ K PG+ + Sbjct: 372 DCPNTNAVTIFVRGGNKMIVEEAKRSIHDALCVTRNLIRDNRVIYGGGSSEISCGLKISAMADDIASIEQYAVRAFADALDAIPLALAENSGLPSIESLSTVKAMQIKEKNPRLGIDCNHRDTNDMKAQHVFDTLPGKTQQFLLANQVVKMILKIDDII-----KMGPGADE 538
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPE_YEAST (T-complex protein 1 subunit epsilon OS=Saccharomyces cerevisiae GN=CCT5 PE=1 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 2.845e-22 Identity = 58/172 (33.72%), Postives = 101/172 (58.72%), Query Frame = 3 Query: 24 EFGTRVD-------CKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 518 EFGT D K+ K T +RG++K +++E ER L D++ V RN++K+ ++V GGGA E+T+S + +++ GI+++ + A A + IP TLA+N G++ I T++ L+ K + + IG+D +DMKE + D + K Q A + M+L+ID+++ Sbjct: 384 EFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVI 555 The following BLAST results are available for this feature:
BLAST of CX301561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301561 ID=CX301561; Name=CX301561; organism=Citrus sinensis; type=EST; length=708bpback to top |