CX301561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 2.409e-21 Identity = 55/163 (33.74%), Postives = 93/163 (57.06%), Query Frame = 3 Query: 57 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 545 +ACT++LRGA++ +L+E ER+L DA+ V +K+ + V GGG +E+ ++ + Q ++ G E E+ A A +P +A N G + + L+ H+ G N G+D G I DM I +++ VK Q +A EAA ++LR+D+I+ +K+ P Sbjct: 369 EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEG-NTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 102.449 bits (254), Expect = 2.409e-21 Identity = 55/163 (33.74%), Postives = 93/163 (57.06%), Query Frame = 3 Query: 57 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 545 +ACT++LRGA++ +L+E ER+L DA+ V +K+ + V GGG +E+ ++ + Q ++ G E E+ A A +P +A N G + + L+ H+ G N G+D G I DM I +++ VK Q +A EAA ++LR+D+I+ +K+ P Sbjct: 369 EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEG-NTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 56/160 (35.00%), Postives = 93/160 (58.13%), Query Frame = 3 Query: 45 CKDP-KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 521 C P K ++++RG++K ++ E ER++ DA+ V R ++K L+ GGGA E+ ++ L + S ++ G+E + A + A E IP TLA+N G+N I T+T L+ +HA G+ GI+ G IS++ E + V A E +L+IDD+V+ Sbjct: 376 CASPGKTVSIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELAVRLAEYSRTLGGMEAYCVRAYSDALEVIPSTLAENAGLNPISTVTELRNRHAQGDK-MAGINVRKGGISNIMEELVVQPLLVSISALTLATETVRSILKIDDVVN 534
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.146e-21 Identity = 57/150 (38.00%), Postives = 88/150 (58.67%), Query Frame = 3 Query: 66 TVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 515 +V++RGA+ +L+E ER+L DA+ V R ++K L+ GGGA E+ +S L+++S S+EG+E + ++ A A E IP TLA+N G+N I+ +T L+ +H NG+ GI ++ E I V A E +LRIDDI Sbjct: 377 SVIIRGANSMILDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLERESRSMEGVEAYIWQEFAQALEVIPTTLAENAGLNSIKVITELRSRHENGD-VNEGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 525
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.109e-21 Identity = 53/157 (33.76%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 51 DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 521 D T+LLRG++ +++E+ER +QDA+ V + + + +++ GGGA E+ +++ L+ + S+ G E+ EA A A E +PR LA+N G++ I T+ L+ H +G+ G++ TG + D + + + + K Q +A EAA ++L+IDDI++ Sbjct: 369 DVHGVTLLLRGSTDHVVDELERGVQDALDVVASTVADGRVLAGGGAIEVELASRLRNYADSVSGREQLAVEAYADALELVPRVLAENAGLDSIDTLVDLRAAHEDGQ-VRAGLNVFTGEVEDAFDAGVVETAHAKEQAVASASEAANLVLKIDDIIA 524
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.008e-21 Identity = 60/165 (36.36%), Postives = 96/165 (58.18%), Query Frame = 3 Query: 57 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAISD-MKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 545 KA TV+++G++ + +E ER+L DA + RN++ P +V GGGA E ++ L+ + + G E+ + A A A E L++ G++ I +T ++ KHA G +NA GID I D M E ++ D+ VK Q K+A EAA +L+IDD+++ KQ P Sbjct: 363 KAVTVIIKGSNNMITDEAERSLNDAFNSIRNLLLEPYIVAGGGAVEEELAKRLRDDARKVIGKEQLAFNAFADALEEYVSILSETAGMDPISALTEIRHKHATGLKNA--GIDVTKARIYDNMLELRVIDSLKVKEQVLKSATEAATAILKIDDMIAAAPAKQQP 525
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.195e-20 Identity = 56/150 (37.33%), Postives = 87/150 (58.00%), Query Frame = 3 Query: 66 TVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 515 +V++RGA+ +++E ER+L DA+ V R ++K L+ GGGA E+ +S L +++ S+EG++ + ++ A A E IP TLA+N G+N I+ +T L+ KH NGE GI ++ E I V A E +LRIDDI Sbjct: 376 SVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGE-LNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 524
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPD_ASHGO (T-complex protein 1 subunit delta OS=Ashbya gossypii GN=CCT4 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20 Identity = 54/148 (36.49%), Postives = 86/148 (58.11%), Query Frame = 3 Query: 72 LLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 515 ++RGA+ +L+E ER+L DA+ V R ++K L+ GGGA E+ VS T+ ++S +++G+E + ++ A A E IP TLA+N G+N I+ +T L+ +H +GE GI ++ + I V A E +LRIDDI Sbjct: 379 IVRGANNVVLDETERSLHDALCVIRCLVKERALIAGGGAPEIEVSRTIMRESRAMQGVEAFVWQEFAEALEVIPTTLAENAGLNSIKVVTELRSRHESGETN-AGISVRRSGTTNTYDEHILQPVLVSTSAITLAAECVKSILRIDDI 525
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.543e-20 Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 57 KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 515 K ++L RGA+ L E ER+L DA+ V R ++K L+ GGG+ E+ + L + + +EG E A + A E IP TLA+N G+N I+ +T L+ +HANGE GI+ G ++++ E + V + A E M+++IDDI Sbjct: 372 KTVSILCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQRLLEHARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHANGEKT-AGINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDDI 523
BLAST of CX301561 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 56/175 (32.00%), Postives = 95/175 (54.29%), Query Frame = 3 Query: 42 DCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHA-NGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAP 563 +C K+ T++LRG +K + EVER++ DA+ + I N ++VPG G+ E+ +S L+ S SI E+ + A A E+IPR L+ N G + + L+ KH+ + W G+D G I + + I++ +K +A EAAC++L ID+ + A G+ ++P Sbjct: 365 ECLKTKSVTIILRGGAKQFIEEVERSINDAIMIVLRCITNSEIVPGAGSIEMQLSKYLRIYSRSICNKEQIVLFSFAKALESIPRHLSHNAGYDSTDILNKLRKKHSEQTSDIWYGVDCMEGDIINAYDNCIFEVTKIKRNVIYSATEAACLILSIDETIK--NPSSAAGTQRSP 537 The following BLAST results are available for this feature:
BLAST of CX301561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CX301561 ID=CX301561; Name=CX301561; organism=Citrus sinensis; type=EST; length=708bpback to top |