GO241473

Overview
NameGO241473
Unique NameGO241473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_DROPS (40S ribosomal protein S3a OS=Drosophila pseudoobscura pseudoobscura GN=RpS3A PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.259e-28
Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYV 510
            DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK  VFEVSL DL  +   E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V
Sbjct:   29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIV 128          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_DROPE (40S ribosomal protein S3a OS=Drosophila persimilis GN=RpS3A PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.259e-28
Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYV 510
            DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK  VFEVSL DL  +   E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V
Sbjct:   29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIV 128          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_DROMO (40S ribosomal protein S3a OS=Drosophila mojavensis GN=RpS3A PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.259e-28
Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYV 510
            DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK  VFEVSL DL  +   E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V
Sbjct:   29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIV 128          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_DROME (40S ribosomal protein S3a OS=Drosophila melanogaster GN=RpS3A PE=1 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 3.259e-28
Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYV 510
            DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK  VFEVSL DL  +   E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V
Sbjct:   29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIV 128          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_DROGR (40S ribosomal protein S3a OS=Drosophila grimshawi GN=RpS3A PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.259e-28
Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYV 510
            DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK  VFEVSL DL  +   E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V
Sbjct:   29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIV 128          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_DROER (40S ribosomal protein S3a OS=Drosophila erecta GN=RpS3A PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.259e-28
Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYV 510
            DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK  VFEVSL DL  +   E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V
Sbjct:   29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIV 128          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_DROAN (40S ribosomal protein S3a OS=Drosophila ananassae GN=RpS3A PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.259e-28
Identity = 63/100 (63.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYV 510
            DWYD+KAP+ F+ R +GKTLV RTQG +IAS+ LK  VFEVSL DL  +   E ++RK RL AEDVQ +NVL NF GM+ TTDK RS+V+KW TLIEA V
Sbjct:   29 DWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIV 128          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_THEAN (40S ribosomal protein S3a OS=Theileria annulata GN=TA17795 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.256e-28
Identity = 65/125 (52.00%), Postives = 90/125 (72.00%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQDH**LHIXGCSALGFTKRLPNQVK 591
            +WY++KAP  F VRN G+TLVT+T GTK+A++GLK  VFE+SL DL  +E+ AYRKI+L  EDVQG+N LT+F G + T DKL SL+RK ++LIEA+   +     ++     +G+TKR P Q+K
Sbjct:   28 EWYNLKAPVTFNVRNFGQTLVTKTIGTKLATDGLKGRVFEMSLADLNADEDQAYRKIKLSCEDVQGRNCLTDFHGTSVTRDKLCSLIRKNYSLIEAFADVKTLDGYNLR-MFCVGYTKRRPGQLK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_CRYHO (40S ribosomal protein S3a OS=Cryptosporidium hominis GN=Chro.40360 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.256e-28
Identity = 62/127 (48.82%), Postives = 91/127 (71.65%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAY--VGCQDH**LHIXGCSALGFTKRLPNQVK 591
            ++YD++APS F+VRN G T+ ++ QGTK+A + L+H V+EVSL DL N+E+ A+RKI+L+ ED+QG+  LT F GM+ T DKL SL+RK+ TLIEA+  V   D    ++     + FT+R+ +QVK
Sbjct:   28 EFYDLRAPSTFKVRNFGTTIASKNQGTKLAVDALRHRVYEVSLADLNNDEDQAFRKIKLQCEDIQGRTCLTEFHGMDMTRDKLCSLIRKYQTLIEAHCNVKTSDG---YVLRLFCIAFTRRMADQVK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_BABBO (40S ribosomal protein S3a OS=Babesia bovis GN=BBOV_III001480 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.260e-28
Identity = 65/127 (51.18%), Postives = 91/127 (71.65%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAY--VGCQDH**LHIXGCSALGFTKRLPNQVK 591
            +WY +KAP  F VRN G+TLV++TQGTK+A++GL+  ++EVSL DL  +E+ +YRKI+L  ED+QG+N LTNF G + T DKL SL+RK ++LIEA+  V   D   L +     +G+TKR P Q+K
Sbjct:   28 EWYTLKAPVMFHVRNFGQTLVSKTQGTKLATDGLRGRIYEVSLADLNADEDQSYRKIKLCCEDIQGRNCLTNFHGTSVTRDKLCSLIRKNYSLIEAFTDVKTTDGYTLRMF---CIGYTKRRPGQLK 151          
The following BLAST results are available for this feature:
BLAST of GO241473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
RS3A_DROPS3.259e-2863.0040S ribosomal protein S3a OS=Drosophila pseudoobsc... [more]
RS3A_DROPE3.259e-2863.0040S ribosomal protein S3a OS=Drosophila persimilis... [more]
RS3A_DROMO3.259e-2863.0040S ribosomal protein S3a OS=Drosophila mojavensis... [more]
RS3A_DROME3.259e-2863.0040S ribosomal protein S3a OS=Drosophila melanogast... [more]
RS3A_DROGR3.259e-2863.0040S ribosomal protein S3a OS=Drosophila grimshawi ... [more]
RS3A_DROER3.259e-2863.0040S ribosomal protein S3a OS=Drosophila erecta GN=... [more]
RS3A_DROAN3.259e-2863.0040S ribosomal protein S3a OS=Drosophila ananassae ... [more]
RS3A_THEAN4.256e-2852.0040S ribosomal protein S3a OS=Theileria annulata GN... [more]
RS3A_CRYHO4.256e-2848.8240S ribosomal protein S3a OS=Cryptosporidium homin... [more]
RS3A_BABBO7.260e-2851.1840S ribosomal protein S3a OS=Babesia bovis GN=BBOV... [more]

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Properties
Property NameValue
Genbank description121 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 212 5, mRNA sequence.