GO241473
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_ORYSJ (40S ribosomal protein S3a OS=Oryza sativa subsp. japonica GN=RPS3A PE=2 SV=2) HSP 1 Score: 185.652 bits (470), Expect = 1.556e-46 Identity = 94/125 (75.20%), Postives = 105/125 (84.00%), Query Frame = 1 Query: 217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQDH**LHIXGCSALGFTKRLPNQVK 591 DWYDIKAPS F VRN+GKTLV+RTQGTKIASEGLKH VFEVSL DL N+E+ AYRKIRLRAEDVQGKNVLTNFWGM+FTTDKLRSLV+KW TLIEA+V + ++ +GFTKR PNQVK Sbjct: 28 DWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTT-DGYMLRLFCIGFTKRRPNQVK 151
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A2_VITVI (40S ribosomal protein S3a-2 OS=Vitis vinifera GN=GSVIVT00031140001 PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 3.832e-45 Identity = 94/127 (74.02%), Postives = 105/127 (82.68%), Query Frame = 1 Query: 217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591 DWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKH VFE+SL DL N+E+HAYRKIRLRAEDVQGKNVLTNFWGM+FTTDKLRSLVRKW TLIEA+V + D+ L + + FTK+ NQ K Sbjct: 28 DWYDIKAPSIFSVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQNDEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMF---CIAFTKKRQNQNK 151
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_HELAN (40S ribosomal protein S3a OS=Helianthus annuus GN=RPS3A PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.456e-44 Identity = 93/127 (73.23%), Postives = 105/127 (82.68%), Query Frame = 1 Query: 217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591 DWYDIKAPS F RNVGKTLVTRTQGTKIASEGLKH VFEVSL DL N+E+H+YRKIRLRAEDVQGKNVLTNFWGM+ TTDKLRSLV+KW +LIEA+V + D+ L + +GFTK+ NQVK Sbjct: 28 DWYDIKAPSLFITRNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDHSYRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMF---CIGFTKKRANQVK 151
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_CICAR (40S ribosomal protein S3a OS=Cicer arietinum PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 7.227e-44 Identity = 92/127 (72.44%), Postives = 107/127 (84.25%), Query Frame = 1 Query: 217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591 DWYDIKAPS F+V+NVGKTLV+RTQGTKIASEGLKH VFE+SL DL +E++A+RKIRLRAEDVQGKNVLTNF+GM+FTTDKLRSLVRKW TLIEA+V + D+ L + +GFTKR NQVK Sbjct: 28 DWYDIKAPSVFQVKNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQGDEDNAFRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMF---CIGFTKRRSNQVK 151
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_CATRO (40S ribosomal protein S3a OS=Catharanthus roseus GN=RPS3A PE=2 SV=4) HSP 1 Score: 176.022 bits (445), Expect = 1.233e-43 Identity = 88/125 (70.40%), Postives = 102/125 (81.60%), Query Frame = 1 Query: 217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQDH**LHIXGCSALGFTKRLPNQVK 591 DWYDIKAPS F VRNVGKTLVTRTQGTKIASEGL+H VFE+SL DL +E+H++RKIRLRAED+QGKNVLTNFWGM+FTTDKLRSLVRKW +LIEA+V + + +GFTK+ NQ K Sbjct: 28 DWYDIKAPSVFSVRNVGKTLVTRTQGTKIASEGLEHRVFEISLADLQGDEDHSFRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTT-DSYTLRMFCIGFTKKRANQQK 151
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_TOBAC (40S ribosomal protein S3a OS=Nicotiana tabacum GN=cyc07 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 3.587e-43 Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQDH**LHIXGCSALGFTKRLPNQVK 591 DWYDIKAPS F ++NVGKTLVTRTQGTKIASEGLKH VFEVSL DL +E+ ++RKIRLRAEDVQGKNVLTNFWGM+FTTDKLRSLV+KW TLIEA+V + + + FTK+ PNQ K Sbjct: 28 DWYDIKAPSVFDIKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQKDEDQSFRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTT-DSYTLRMFCIAFTKKRPNQQK 151
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A1_VITVI (40S ribosomal protein S3a-1 OS=Vitis vinifera GN=GSVIVT00020038001 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 4.684e-43 Identity = 91/127 (71.65%), Postives = 103/127 (81.10%), Query Frame = 1 Query: 217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591 DWYDIKAPS F VRNVGKTLV+RTQGTKIASEGLKH VFE+SL DL +E+ AYRKIRLRAEDVQG+NVLTNFWGM+FTTDKLRSLVRKW TLIEA+V + D+ L + + FTK+ NQ K Sbjct: 28 DWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADEDQAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLF---CIAFTKKRVNQNK 151
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A2_ARATH (40S ribosomal protein S3a-2 OS=Arabidopsis thaliana GN=RPS3AB PE=2 SV=3) HSP 1 Score: 172.17 bits (435), Expect = 1.780e-42 Identity = 90/127 (70.87%), Postives = 102/127 (80.31%), Query Frame = 1 Query: 217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591 DWYD+KAP F RNVGKTLV+RTQGTKIASEGLKH VFEVSL DL N+E++AYRKIRLRAEDVQG+NVLT FWGM+FTTDKLRSLV+KW TLIEA+V + D L + + FTKR NQVK Sbjct: 28 DWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMF---CIAFTKRRANQVK 151
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_BRARA (40S ribosomal protein S3a OS=Brassica rapa GN=RPS3A PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 3.036e-42 Identity = 90/127 (70.87%), Postives = 102/127 (80.31%), Query Frame = 1 Query: 217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591 DWYDIKAPS F RNVGKTLV+RTQGTKIASEGLKH VFEVSL DL +E+ AYRKIRLRAEDVQG+NVLT FWGM+FTTDKLRSLV+KW TLIE++V + D+ L + + FTKR NQVK Sbjct: 28 DWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLNKDEDQAYRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLF---CIAFTKRRANQVK 151
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A1_ARATH (40S ribosomal protein S3a-1 OS=Arabidopsis thaliana GN=RPS3AA PE=1 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 8.834e-42 Identity = 89/127 (70.08%), Postives = 101/127 (79.53%), Query Frame = 1 Query: 217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591 DWYD+KAPS F RNVGKTLV+RTQGTKIASEGLKH VFEVSL DL +E++AYRKIRLRAEDVQG+NVL FWGM+FTTDKLRSLV+KW TLIEA+V + D L + + FTKR NQVK Sbjct: 28 DWYDVKAPSIFTHRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDNAYRKIRLRAEDVQGRNVLCQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDSYTLRLF---CIAFTKRRANQVK 151 The following BLAST results are available for this feature:
BLAST of GO241473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 157
Pagesback to topProperties
|