GE213307
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213307 vs. ExPASy Swiss-Prot
Match: RS263_ARATH (40S ribosomal protein S26-3 OS=Arabidopsis thaliana GN=RPS26C PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.824e-24 Identity = 53/73 (72.60%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 79 MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQY 297 MTF VK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+GYTLPKLYAK QY Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQY 73
BLAST of GE213307 vs. ExPASy Swiss-Prot
Match: RS262_ARATH (40S ribosomal protein S26-2 OS=Arabidopsis thaliana GN=RPS26B PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 2.213e-23 Identity = 52/73 (71.23%), Postives = 55/73 (75.34%), Query Frame = 1 Query: 79 MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQY 297 MTF V IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+GYTLPKLYAK QY Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQY 73
BLAST of GE213307 vs. ExPASy Swiss-Prot
Match: RS261_ARATH (40S ribosomal protein S26-1 OS=Arabidopsis thaliana GN=RPS26A PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 2.213e-23 Identity = 52/73 (71.23%), Postives = 55/73 (75.34%), Query Frame = 1 Query: 79 MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQY 297 MTF V IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+GYTLPKLYAK QY Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQY 73
BLAST of GE213307 vs. ExPASy Swiss-Prot
Match: RS26_ORYSJ (40S ribosomal protein S26 OS=Oryza sativa subsp. japonica GN=RPS26 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.775e-23 Identity = 50/73 (68.49%), Postives = 55/73 (75.34%), Query Frame = 1 Query: 79 MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQY 297 MTF VK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+DGY LPKLYAK+ + Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHH 73
BLAST of GE213307 vs. ExPASy Swiss-Prot
Match: RS26_CAEEL (40S ribosomal protein S26 OS=Caenorhabditis elegans GN=rps-26 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.657e-18 Identity = 42/73 (57.53%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 79 MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQY 297 MTF V FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A Y Y LPKLY K+ Y Sbjct: 1 MTFKRRNHGRNKKNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYTQYALPKLYHKLHY 73
BLAST of GE213307 vs. ExPASy Swiss-Prot
Match: RS26_OCTVU (40S ribosomal protein S26 OS=Octopus vulgaris GN=RPS26 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.064e-17 Identity = 38/56 (67.86%), Postives = 48/56 (85.71%), Query Frame = 1 Query: 130 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQY 297 VK+IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A VY+ Y LPKLYAK+ Y Sbjct: 18 VKYIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYEVYALPKLYAKLLY 73
BLAST of GE213307 vs. ExPASy Swiss-Prot
Match: RS26_DROME (40S ribosomal protein S26 OS=Drosophila melanogaster GN=RpS26 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.370e-17 Identity = 37/56 (66.07%), Postives = 47/56 (83.93%), Query Frame = 1 Query: 130 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQY 297 VK +RC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA ++D Y LPKLYAK+ Y Sbjct: 18 VKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHY 73
BLAST of GE213307 vs. ExPASy Swiss-Prot
Match: RS26_ANOGA (40S ribosomal protein S26 OS=Anopheles gambiae GN=RpS26 PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 2.370e-17 Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 130 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQY 297 VK +RC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A VY Y LPKLYAK+ Y Sbjct: 18 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHY 73
BLAST of GE213307 vs. ExPASy Swiss-Prot
Match: RS26_RAT (40S ribosomal protein S26 OS=Rattus norvegicus GN=Rps26 PE=3 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 6.896e-17 Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 130 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQY 297 V+ IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA V+D Y LPKLY K+ Y Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHY 73
BLAST of GE213307 vs. ExPASy Swiss-Prot
Match: RS26_PIG (40S ribosomal protein S26 OS=Sus scrofa GN=RPS26 PE=3 SV=4) HSP 1 Score: 85.8853 bits (211), Expect = 6.896e-17 Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 130 VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQY 297 V+ IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA V+D Y LPKLY K+ Y Sbjct: 18 VQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHY 73 The following BLAST results are available for this feature:
BLAST of GE213307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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