DT214573

Overview
NameDT214573
Unique NameDT214573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14
Identity = 52/177 (29.38%), Postives = 79/177 (44.63%), Query Frame = -1
Query:   81 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPI----MGGGVTVPSAGYGEAFALEFIISFNLMF-XXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 596
            GL++  +  S GHISGAHLNPAVT+              +YI AQ + ++ A+  L GI   +    +G          G+   +E I +  L+             +G  A +A+G +V L  L+A   TG  +NP R+ G AV   N+   WI+   P +G+      Y  +  P
Sbjct:   57 GLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSLGRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRNFSNHWIFWVGPFIGSALAVLIYDFILAP 233          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 3.664e-14
Identity = 52/177 (29.38%), Postives = 77/177 (43.50%), Query Frame = -1
Query:   81 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGV----TVPSAGYGEAFALEFIISFNLMFXXXXXXXXXXXV-GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 596
            GL++  +  S GHISGAHLNPAVT+              +YI AQ + ++ A   L GI   + G  +           G+   +E I +  L+              G  A +A+G +V L  L+A   TG  +NP R+ G AV  +N+   WI+   P +G       Y  +  P
Sbjct:   57 GLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFILAP 233          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14
Identity = 57/188 (30.32%), Postives = 88/188 (46.81%), Query Frame = -1
Query:   99 IGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTV---PSAGYGE----------AFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNY--KAIWIYLTAPILGALCGAGTY 617
            +G++ + GL V+ +I + GHISG H NPAVTI   A   F    V  YI +Q++  + AA  L  I    +G   T     S G+GE          A   E +++   +             G  A +A+G  ++L  LI+ P T  S+NP R+   A+  N +  + +W +   PI+G + G G Y
Sbjct:   37 VGVSLAFGLTVLTMIYAVGHISGGHFNPAVTIGLWAGGRFRAVEVIPYIISQVIGGILAAAVLYVIASGQVGFDATTSGFASNGFGEHSPGGFSLQSAIVAEIVLTAIFLIVIIGATDRRAPPG-FAPLAIGLALVLINLISIPITNTSVNPARSTAVAIFQNTWALEQLWFFWVMPIIGGIVGGGIY 223          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 55/191 (28.80%), Postives = 86/191 (45.03%), Query Frame = -1
Query:   75 TQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSA-GYGEAFALEFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEE 638
            T G   L+ LA +   A+   + +  ++SG H+NPAVT                Y  AQ++ ++ A   L+   + +   G  + S  G      LE I++F L++              G +A +A+G  V  NIL+ GP +G SMNP R  GPA+    +   WIY   P +G+   A  Y  + +P E
Sbjct:   62 TPGGLILVALAHA--FALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWRWHDHWIYWVGPFIGSALAALIYEYMVIPTE 250          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 60/209 (28.71%), Postives = 89/209 (42.58%), Query Frame = -1
Query:   90 TATAIVNQKTQ----GSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIF---HPIMGGGVTVPSAGY--GEAFALEFIISFNLMFXXXXXXXXXXXVGE-----LAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKA---IWIYLTAPILGALCGAGTYSAV 665
            T   ++  K +     S  L+G+A S G  + V++  T  ISG H+NPAVT      +        VY+ AQ   ++C    +K      +   GGG    + GY  G AF  E I +F L++             +     LA + +G  V +  L   P TG  +NP R+ G AV  N  +     WI+   P +GAL  A  +  V
Sbjct:   56 TVATVIGYKKETDPCASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYV 264          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 52/177 (29.38%), Postives = 77/177 (43.50%), Query Frame = -1
Query:   81 GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPI----MGGGVTVPSAGYGEAFALEFIISFNLMF-XXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 596
            GL++  +  S GHISGAHLNPAVT+              +YI AQ + ++ A   L GI   +    +G          G+   +E I +  L+             +G  A +A+G +V L  L+A   TG  +NP R+ G AV   N+   WI+   P +G       Y  +  P
Sbjct:   57 GLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVLTRNFSNHWIFWVGPFIGGALAVLIYDFILAP 233          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.162e-14
Identity = 56/193 (29.02%), Postives = 86/193 (44.56%), Query Frame = -1
Query:  117 FAGTATAIVNQKTQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGI-----FHPIMGGGVTV--PSAGYGEAFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGAL 674
            F G  + I N    G   L+  A + GLA+ ++I + G+ISG H NPAV++A   +       +  Y  +Q+   L  A   K +     F    G    +        EA  +E I++  L+            +G LA  ++G +V+++IL  G  +G  MNP R  GPAV    +   WIY   P+L  L
Sbjct:   50 FIGCLSVIENSPNTG---LLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMGAVNEKTMGPLAPFSIGFSVIVDILAGGSISGACMNPARAFGPAVMAGYWDFHWIYWLGPLLAGL 239          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: AQPZ2_AGRT5 (Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.066e-13
Identity = 59/184 (32.07%), Postives = 87/184 (47.28%), Query Frame = -1
Query:  108 GLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMG---GGVTVPSAGYGE----------AFALEFIISFNLMFXXXXXXXXXXXVGELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNY--KAIWIYLTAPILGALCGA 614
            G+A + GL V+ +  + G ISG H NPAV++       FP   +  Y+ AQ+  ++ AA AL  I     G   GG    S GYGE          A  +E I++   +             G  A IA+G  + L  LI+ P T  S+NP R+ G A+ V  +  + +W++  API+G   GA
Sbjct:   38 GVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFA--SNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGRVPAG-FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGA 218          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 58/190 (30.53%), Postives = 86/190 (45.26%), Query Frame = -1
Query:   81 TQGSETLIGLAGSTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVPSAGYGEAFAL--EFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLP 638
            T G   L+ LA +  LA+   + +  ++SG H+NPAVT A              Y  AQ++ ++ A   L+   + +   G  V S G  E   L  E I++F L++              G +A +A+G  V  NIL+ GP  G SMNP R  GPA+    +   WIY   P +G    A  Y  + +P
Sbjct:   62 TPGGLVLVALAHA--LALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVAS-GVSELHGLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWRWSNHWIYWVGPFIGGALAALIYEYMIIP 248          
BLAST of DT214573 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 65/218 (29.82%), Postives = 93/218 (42.66%), Query Frame = -1
Query:   60 FAGTATAIVNQKT--QGSETLIGLAGST---GLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQIMASLCAAFALKGIFHPIMGGGVTVP----SAGYGEAFAL--EFIISFNLMFXXXXXXXXXXXV--GELAGIAVGATVMLNILIAGPSTGGSMNPVRTLGPAVAVNNYKAIWIYLTAPILGALCGAGTYSAVKLPEEDTDAL 674
            FAG+ + I   K    G+ T  GL  +       + V +    +ISG H+NPAVT       +       +Y  AQ++ S+ A F L         GG  +P    SAG G   AL  E +++F L++              G +A IA+G  V  NIL  G  +G SMNP    GPAV    +   W+Y   P++G       Y  V + E   + L
Sbjct:   36 FAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLS-----FATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTNHWVYWAGPLIGGGLAGIIYDFVFIDENAHEQL 248          
The following BLAST results are available for this feature:
BLAST of DT214573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
AQP1_RAT3.664e-1429.38Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_PONAB3.664e-1429.38Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQPZ_PHOLL4.785e-1430.32Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
TIP31_ARATH6.249e-1428.80Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
PIP1_ATRCA6.249e-1428.71Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
AQP1_MOUSE6.249e-1429.38Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP8_MOUSE8.162e-1429.02Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
AQPZ2_AGRT51.066e-1332.07Aquaporin Z 2 OS=Agrobacterium tumefaciens (strain... [more]
TIP32_ARATH1.392e-1330.53Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP12_ARATH1.392e-1329.82Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_3G01_b2 Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10-2 Citrus sinensis cDNA clone UCRCS10-3G01-N1-5.d-polyt, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214573 ID=DT214573; Name=DT214573; organism=Citrus sinensis; type=EST; length=701bp
ACTTCCGTGACAGTGTTGATCAATCACCTTCTGAAGCTGCCCTTTGTGGC
AGGCTTTGCGAGGGCATCGGTGTCTTCCTCCGGTAGCTTGACAGCAGAAT
AAGTTCCTGCACCGCATAATGCCCCAAGAATGGGGGCGGTCAGGTAGATC
CATATGGCCTTGTAATTGTTTACTGCTACGGCTGGCCCCAGTGTTCTTAC
TGGATTCATCGAGCCACCCGTTGATGGCCCGGCTATGAGTATGTTGAGCA
TGACAGTTGCTCCCACCGCGATTCCCGCCAACTCGCCCACAGCTCTCGTG
TCGGTGGCTACAGCAGTGACAACAAACATGAGATTGAAGCTAATTATGAA
TTCCAAAGCAAAAGCTTCACCATATCCTGCTGAAGGAACTGTGACTCCCC
CTCCCATAATTGGATGAAAAATTCCCTTTAAGGCAAATGCAGCACATAGT
GATGCCATTATTTGTGCTCCAATATAAACGGGTACATGTTTCCATGGAAA
GTGCTTTAGGGCAGCAAAGGCAATGGTGACAGCAGGGTTGAGATGGGCGC
CGGAGATGTGACCGGTCGATAAGATGACGACCATGACAGCGAGACCGGTG
GAGCCGGCGAGGCCAATTAGGGTTTCTGAGCCTTGTGTTTTCTGGTTCAC
AATAGCTGTGGCTGTCCCAGCAAAATATTAGCATAAGTGTGCCCACAAAT
T
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