DT214566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB1_GLOMM (Tubulin beta-1 chain OS=Glossina morsitans morsitans PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 4.005e-59 Identity = 106/122 (86.89%), Postives = 118/122 (96.72%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA Sbjct: 309 RYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB1_DROME (Tubulin beta-1 chain OS=Drosophila melanogaster GN=betaTub56D PE=1 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 4.005e-59 Identity = 106/122 (86.89%), Postives = 118/122 (96.72%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA Sbjct: 309 RYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB4_MOUSE (Tubulin beta-4 chain OS=Mus musculus GN=Tubb4 PE=1 SV=3) HSP 1 Score: 227.639 bits (579), Expect = 6.831e-59 Identity = 107/122 (87.70%), Postives = 118/122 (96.72%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLT +A+FRG+MS KEVDEQML+VQ+KNSSYFVEWIPNNVK+ VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 309 RYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB4_MACFA (Tubulin beta-4 chain OS=Macaca fascicularis GN=TUBB4 PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 6.831e-59 Identity = 107/122 (87.70%), Postives = 118/122 (96.72%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLT +A+FRG+MS KEVDEQML+VQ+KNSSYFVEWIPNNVK+ VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 309 RYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB4_HUMAN (Tubulin beta-4 chain OS=Homo sapiens GN=TUBB4 PE=1 SV=2) HSP 1 Score: 227.639 bits (579), Expect = 6.831e-59 Identity = 107/122 (87.70%), Postives = 118/122 (96.72%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLT +A+FRG+MS KEVDEQML+VQ+KNSSYFVEWIPNNVK+ VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 309 RYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB4_BOVIN (Tubulin beta-4 chain OS=Bos taurus GN=TUBB4 PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 6.831e-59 Identity = 107/122 (87.70%), Postives = 118/122 (96.72%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLT +A+FRG+MS KEVDEQML+VQ+KNSSYFVEWIPNNVK+ VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 309 RYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB1_CAEEL (Tubulin beta-1 chain OS=Caenorhabditis elegans GN=mec-7 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.165e-58 Identity = 105/122 (86.07%), Postives = 118/122 (96.72%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLTA+A+FRG+MS KEVDEQMLN+QNKNSSYFV+WIPNNVK+ VCDIPP GLKM++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A A Sbjct: 309 RYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB1_CAEBR (Tubulin beta-1 chain OS=Caenorhabditis briggsae GN=mec-7 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.165e-58 Identity = 105/122 (86.07%), Postives = 118/122 (96.72%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLTA+A+FRG+MS KEVDEQMLN+QNKNSSYFV+WIPNNVK+ VCDIPP GLKM++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A A Sbjct: 309 RYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAA 430
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB3_GOSHI (Tubulin beta-3 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.522e-58 Identity = 109/116 (93.97%), Postives = 112/116 (96.55%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 RYLTASAMFRGKMSTKE DEQM+NVQNKNSSYFVEWIPNNVKS+VCDIPP GL MASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS YQQ Sbjct: 309 RYLTASAMFRGKMSTKEADEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSGYQQ 424
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBB1_BRUPA (Tubulin beta-1 chain OS=Brugia pahangi PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.522e-58 Identity = 105/122 (86.07%), Postives = 117/122 (95.90%), Query Frame = -2 Query: 255 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 620 RYLT +AMFRG+MS +EVDEQM+ VQNKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA Sbjct: 309 RYLTVAAMFRGRMSMREVDEQMMQVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430 The following BLAST results are available for this feature:
BLAST of DT214566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214566 ID=DT214566; Name=DT214566; organism=Citrus sinensis; type=EST; length=861bpback to top |