DT214566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA1A_PANTR (Tubulin alpha-1A chain OS=Pan troglodytes GN=TUBA1A PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.340e-16 Identity = 39/124 (31.45%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++ Sbjct: 311 KYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA1A_MOUSE (Tubulin alpha-1A chain OS=Mus musculus GN=Tuba1a PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.340e-16 Identity = 39/124 (31.45%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++ Sbjct: 311 KYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA1A_HUMAN (Tubulin alpha-1A chain OS=Homo sapiens GN=TUBA1A PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.340e-16 Identity = 39/124 (31.45%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++ Sbjct: 311 KYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA1A_CRIGR (Tubulin alpha-1A chain OS=Cricetulus griseus GN=TUBA1A PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.340e-16 Identity = 39/124 (31.45%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++ Sbjct: 311 KYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA_OCTVU (Tubulin alpha chain (Fragment) OS=Octopus vulgaris PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15 Identity = 38/124 (30.65%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ ++RG + K+V+ + ++ K S FV+W P K + PPT ++ A + N+T++ E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 100 KYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVLGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 223
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA_ENTDO (Tubulin alpha chain OS=Enteroctopus dofleini PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15 Identity = 38/124 (30.65%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ ++RG + K+V+ + ++ K S FV+W P K + PPT ++ A + N+T++ E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 311 KYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA2_DROME (Tubulin alpha-2 chain OS=Drosophila melanogaster GN=alphaTub85E PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15 Identity = 39/124 (31.45%), Postives = 69/124 (55.65%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ ++RG + K+V+ + ++ K S FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF EA ++ L +Y++ Sbjct: 311 KYMACCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA1C_HUMAN (Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15 Identity = 38/124 (30.65%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT ++ A + N+T++ E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++ Sbjct: 311 KYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA1C_BOVIN (Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15 Identity = 38/124 (30.65%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT ++ A + N+T++ E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++ Sbjct: 311 KYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
BLAST of DT214566 vs. ExPASy Swiss-Prot
Match: TBA_LEPDS (Tubulin alpha chain OS=Lepidoglyphus destructor PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15 Identity = 39/124 (31.45%), Postives = 70/124 (56.45%), Query Frame = -2 Query: 273 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 620 +Y+ ++RG + K+V+ + ++ K S FV+W P K + PPT ++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++ Sbjct: 311 KYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434 The following BLAST results are available for this feature:
BLAST of DT214566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214566 ID=DT214566; Name=DT214566; organism=Citrus sinensis; type=EST; length=861bpback to top |