DT214526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS263_ARATH (40S ribosomal protein S26-3 OS=Arabidopsis thaliana GN=RPS26C PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.638e-50 Identity = 92/128 (71.88%), Postives = 99/128 (77.34%), Query Frame = -2 Query: 146 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRPAIGVPVRP 529 MTFKRRNGG NKH RGHV IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQ+A +Y+ Y LPKLYAK QYCVSCAIHSH R PP RF RR++D PKP QPGQAPRPA G P P Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPAQPGQAPRPAGGAPAAP 128
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS262_ARATH (40S ribosomal protein S26-2 OS=Arabidopsis thaliana GN=RPS26B PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 8.105e-50 Identity = 91/121 (75.21%), Postives = 98/121 (80.99%), Query Frame = -2 Query: 167 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRPA 529 MTFKRRNGG NKH RGHVN IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQ+A +Y+ Y LPKLYAK QYCVSCAIHSH R PP RF RR++D PKPGQPGQAPRPA Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQPGQAPRPA 121
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS261_ARATH (40S ribosomal protein S26-1 OS=Arabidopsis thaliana GN=RPS26A PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 8.105e-50 Identity = 91/121 (75.21%), Postives = 98/121 (80.99%), Query Frame = -2 Query: 167 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRPA 529 MTFKRRNGG NKH RGHVN IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQ+A +Y+ Y LPKLYAK QYCVSCAIHSH R PP RF RR++D PKPGQPGQAPRPA Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFTRRKEDTPKPGQPGQAPRPA 121
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_ORYSJ (40S ribosomal protein S26 OS=Oryza sativa subsp. japonica GN=RPS26 PE=2 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 5.626e-43 Identity = 84/125 (67.20%), Postives = 94/125 (75.20%), Query Frame = -2 Query: 155 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRPAIGVP 529 MTFKRRNGG NKHGRGHV +IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQ+AC++D YVLPKLYAK+ +CVSCAIH+H R PP+RF RRR+D P Q PRP G P Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRDRRPPERF-RRREDRP------QGPRPGGGAP 118
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_CAEEL (40S ribosomal protein S26 OS=Caenorhabditis elegans GN=rps-26 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.655e-34 Identity = 72/120 (60.00%), Postives = 82/120 (68.33%), Query Frame = -2 Query: 170 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRP 529 MTFKRRN G NK RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ DA Y Y LPKLY K+ YC++CAIHS R PP RF +R +PG PG PRP Sbjct: 1 MTFKRRNHGRNKKNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYTQYALPKLYHKLHYCIACAIHSKVVRNRSREARRDRNPPPRF-GQRAAAARPGAPG--PRP 117
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_OCTVU (40S ribosomal protein S26 OS=Octopus vulgaris GN=RPS26 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.536e-32 Identity = 67/117 (57.26%), Postives = 80/117 (68.38%), Query Frame = -2 Query: 179 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQA 529 MT KRRN G K GRGHV +IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ DA +Y+ Y LPKLYAK+ YCVSCAIHS R PP RF R + + +PGQA Sbjct: 1 MTSKRRNNGRGKKGRGHVKYIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYEVYALPKLYAKLLYCVSCAIHSKIVRNRSREARKDRTPPIRFRPMRGEGGQNARPGQA 117
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_DROME (40S ribosomal protein S26 OS=Drosophila melanogaster GN=RpS26 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.782e-31 Identity = 63/100 (63.00%), Postives = 74/100 (74.00%), Query Frame = -2 Query: 230 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKR 529 MT KRRNGG NKH RGHV +RC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A I+D+YVLPKLYAK+ YCVSCAIHS R PP R Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLR 100
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_SCHCO (40S ribosomal protein S26 OS=Schizophyllum commune GN=RPS26 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.940e-31 Identity = 62/100 (62.00%), Postives = 70/100 (70.00%), Query Frame = -2 Query: 230 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKR 529 MT KRRNGG NK GRGHV F+RCSNC +C KDKAIKRF VRN+VE AA+RD+ DA +Y Y +PKLY K+ YCVSCAIHSH R PP R Sbjct: 1 MTKKRRNGGRNKSGRGHVTFVRCSNCSRCVAKDKAIKRFTVRNMVESAAIRDISDASVYPEYAIPKLYIKIAYCVSCAIHSHVVRVRSREGRRNRAPPPR 100
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_ANOGA (40S ribosomal protein S26 OS=Anopheles gambiae GN=RpS26 PE=3 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 4.940e-31 Identity = 62/100 (62.00%), Postives = 73/100 (73.00%), Query Frame = -2 Query: 230 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKR 529 MT KRRNGG KH RGHV +RC+NC +C PKDKAIK+F++RNIVE AAVRD+ DA +Y +YVLPKLYAK+ YCVSCAIHS R PP+R Sbjct: 1 MTKKRRNGGRCKHNRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYCVSCAIHSKVVRNRSKETRRIRTPPQR 100
BLAST of DT214526 vs. ExPASy Swiss-Prot
Match: RS26_RAT (40S ribosomal protein S26 OS=Rattus norvegicus GN=Rps26 PE=3 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 5.462e-30 Identity = 67/120 (55.83%), Postives = 78/120 (65.00%), Query Frame = -2 Query: 170 MTFKRRNGGLNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQDACIYDNYVLPKLYAKMQYCVSCAIHSHXXXXXXXXXXXXREPPKRFMRRRDDLPKPGQPGQAPRP 529 MT KRRN G K GRGHV IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A ++D YVLPKLY K+ YCVSCAIHS R PP RF +P G APRP Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRF--------RPA--GAAPRP 110 The following BLAST results are available for this feature:
BLAST of DT214526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214526 ID=DT214526; Name=DT214526; organism=Citrus sinensis; type=EST; length=575bpback to top |