DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BACC4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus cereus (strain B4264) GN=dxs PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12 Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = -2 Query: 227 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLT 589 IG + EG A+L +G + ++A L K G+ V V +ARF KP+D + +L + ++T+EE L GGFG+ V F + +G + V+ + +PD +IEH S T+ L GLT Sbjct: 492 IGTWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSALVE--RMGIPDRFIEHGSVTKLLEEIGLT 611
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BACC2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus cereus (strain G9842) GN=dxs PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12 Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = -2 Query: 227 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLT 589 IG + EG A+L +G + ++A L K G+ V V +ARF KP+D + +L + ++T+EE L GGFG+ V F + +G + V+ + +PD +IEH S T+ L GLT Sbjct: 492 IGTWETLKEGTQAAILTFGTTIPMAMEAAERLEKAGVSVKVVNARFIKPMDEAYLHDLLGKNIPILTIEEACLIGGFGTGVVEFASENGYHSALVE--RMGIPDRFIEHGSVTKLLEEIGLT 611
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BACA2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bacillus amyloliquefaciens (strain FZB42) GN=dxs PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12 Identity = 46/125 (36.80%), Postives = 68/125 (54.40%), Query Frame = -2 Query: 227 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPI---VLPDNYIEHASPTQQLALAGLT 589 IG +V GKD +L +G ++ L+A L K G+ V V +ARF KP+D ++++ + ++T+EE L GGFGS + L+ D G+ PI +PD +IEH S T L GLT Sbjct: 492 IGTWEVLRPGKDAVILTFGTTIEMALEAAEELQKEGLSVRVVNARFIKPIDKQMMKAILNEGLPILTIEEAVLEGGFGSTI-----LEYAHDLGMYHTPIDRMGIPDRFIEHGSVTALLEEIGLT 611
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_THETN (1-deoxy-D-xylulose-5-phosphate synthase OS=Thermoanaerobacter tengcongensis GN=dxs PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 46/134 (34.33%), Postives = 69/134 (51.49%), Query Frame = -2 Query: 200 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIV---LPDNYIEHASPTQQLALAGLTGHHIAATAL 589 +GKG+V +EG+ +A+ G MV + A +L GI+ V + RF KPLD +L+ E+ ++TVE+ + GG GS A+ LL+ +RP++ PD +IEH GL IA T L Sbjct: 486 LGKGEVLLEGEKIAVFALGRMVSKSIDAAEILKGHGINPFVVNLRFVKPLDEELILEISNKVDLVVTVEDNVIAGGVGS------AILELLNDKKVYRPVLRLGFPDKFIEHGDVESLFKKYGLDSQSIADTIL 613
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_NITOC (1-deoxy-D-xylulose-5-phosphate synthase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dxs PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = -2 Query: 260 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHAS 589 +GK ++ +G+ +A+L +GA V L+A L D TV + RF KPLD LV E+ NH L+TVE+ + GG GS VS +A G+ V LPDN++EH S Sbjct: 496 LGKAELKRKGRGIAILAFGATVAPALEAAEKL-----DATVVNMRFVKPLDEDLVLEMAMNHELLVTVEDNVIAGGAGSAVSECLAYHGV---SVPLLLHGLPDNFLEHGS 598
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_HAEIG (1-deoxy-D-xylulose-5-phosphate synthase OS=Haemophilus influenzae (strain PittGG) GN=dxs PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 45/136 (33.09%), Postives = 74/136 (54.41%), Query Frame = -2 Query: 185 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 589 IGK ++ EG+ +A+L +G ++ + L+ L KL + TV D RF KP+DI+++ L Q H +L+T+EE ++ GG GS V+ + G + LPD +I A+ + LA GL I L+ + + Sbjct: 494 IGKSRLIREGQKIAILNFGTLLPSALE---LSEKL--NATVVDMRFVKPIDIEMINMLAQTHDYLVTLEENAIQGGAGSAVAEVLNSSG---KSTALLQLGLPDYFIPQATQQEALADLGLDTKGIEEKILNFIAK 621
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_FRAP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=dxs PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 46/139 (33.09%), Postives = 73/139 (52.52%), Query Frame = -2 Query: 179 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTR 592 ++GK K+ +G VA+L +G ++ A L K I TV D RF KPLD +++ ++CQNH + T+EE S+ GG GS V+ +I + L + R L D ++ H + L + L+ + IA LL + Sbjct: 486 KLGKAKLVKKGSRVAILNFGTLLP---LANQLADKYHI--TVVDMRFVKPLDEQMINQICQNHNIVFTLEESSIAGGAGSAVNEYIFAND-LSKNITVRNFGLKDEFLTHGTKDLLLDYSNLSFNKIAEVLEKLLSHKK 618
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_AZOPC (1-deoxy-D-xylulose-5-phosphate synthase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=dxs PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 39/121 (32.23%), Postives = 69/121 (57.02%), Query Frame = -2 Query: 230 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGL 589 +GKG+ EGK++A++ G + KA L+ KLGI V D + KP+D +L+ E+ +N+ ++ +E+G++ GG G+ V F+ +G K + I +PD +I H + + L G+ Sbjct: 502 VGKGRKLKEGKEIAVVSIGTIGNLARKAIRLVEKLGISVAHYDMIYLKPIDEELLHEIGKNYRCVVVIEDGTIKGGLGTAVIEFMVQNGY---DPKIKQIGVPDEFIPHGTIAELYKLCGM 619
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RHOBA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopirellula baltica GN=dxs PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 45/128 (35.16%), Postives = 73/128 (57.03%), Query Frame = -2 Query: 212 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGS-LGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIA 592 EIGK + EG D ++ YGAM++ + A L +++ V +ARF KP+D ++V + + F++T+EEG+ +GGFGS A+D LD+ R + LPD ++ H +Q L + L+ IA Sbjct: 495 EIGKAEWIREGTDGTIVAYGAMLEQAIAAAEQLEG-ELEIGVVNARFVKPIDAEMVHKTLSDGRFVVTLEEGTRVGGFGSAFLE-SAVDQRLDTRAVHR-LALPDEFVLHGDRSQLLDQSTLSAQKIA 619
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_METCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Methylococcus capsulatus GN=dxs PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 50/140 (35.71%), Postives = 73/140 (52.14%), Query Frame = -2 Query: 173 IGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSL-GGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 589 +GKG+V + GK A+L +G + A AL I TVA+ RF KPLD L+ EL H ++TVEE ++ GG GS V F+A G+ I L D +++ + + LA+AGL IA + + + T A Sbjct: 494 VGKGEVRLRGKGTAILAFGTPL-----AAALAVGERIGATVANMRFVKPLDEALILELAATHDRIVTVEENAIAGGAGSAVGEFLAAQ---HCGIPVCHIGLKDEFLDQGTREELLAIAGLDQAGIARSIDAFIQATAAA 625 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |