DT214510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.261e-49 Identity = 94/144 (65.28%), Postives = 115/144 (79.86%), Query Frame = -2 Query: 161 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 592 E+GKG++ VEG+ VALLGYG+ VQNCL A ++L G+ VTVADARFCKPLD L+R L ++H L+TVE+GS+GGFGSHV F+ALDGLLD +KWRPIVLPD YI+H SP QLA AGLT HIAAT ++LG+TREAL +M Sbjct: 575 EVGKGRILVEGERVALLGYGSAVQNCLAAASVLESRGLQVTVADARFCKPLDRALIRSLAKSHEVLVTVEKGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREALEVM 718
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.820e-48 Identity = 92/144 (63.89%), Postives = 114/144 (79.17%), Query Frame = -2 Query: 161 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLM 592 E+GKG+V +EG+ VALLGYG+ VQ CL A +L+ + G+ VTVADARFCKPLD L+R L +H L+TVEEGS+GGFGSHV+ F+ALDGLLD +KWRP+VLPD YI+H SP QLA AGLT HIAAT ++LG+ REAL +M Sbjct: 572 EVGKGRVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAIM 715
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.541e-47 Identity = 92/141 (65.25%), Postives = 112/141 (79.43%), Query Frame = -2 Query: 170 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREAL 592 EIGKG++ EG+ VALLGYG+ VQ+CL A +L + G++VTVADARFCKPLD L+R L ++H LITVEEGS+GGFGSHV F+ALDGLLD +KWRP+VLPD YI+H +P QLA AGL HIAATAL+L+G REAL Sbjct: 576 EIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 716
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RHIL3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dxs PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.072e-32 Identity = 70/136 (51.47%), Postives = 92/136 (67.65%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 +IGKG++ EG VALL +G + +CL A L G+ TVADARF KPLD L+R+L ++H +ITVEEGS+GGFGSHV HF+A +GLLD+G+K R +V+PD ++E A P A AGL I +T LGR Sbjct: 495 QIGKGRIVKEGTKVALLSFGTRLADCLLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEMVITVEEGSIGGFGSHVMHFLATEGLLDNGLKLRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RHILO (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium loti GN=dxs PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.400e-32 Identity = 71/140 (50.71%), Postives = 92/140 (65.71%), Query Frame = -2 Query: 173 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 592 E+GKG+V EG VALL +G +Q+CL A L G+ TVADARF KPLD L+R L ++H L+TVEEG++GGF SHV F+A +GLL+SG+K RP+VLPD + +HA P + A AGL I T + L T A Sbjct: 495 ELGKGRVVREGSKVALLSFGTRLQDCLIAAEELGAAGLSTTVADARFAKPLDEDLIRRLARSHEVLVTVEEGAIGGFASHVLQFLAHEGLLESGLKVRPLVLPDVFTDHAKPEKMYADAGLDAAGIVRTVFTALDHTARA 634
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_RHOCS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dxs PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.388e-32 Identity = 71/135 (52.59%), Postives = 90/135 (66.67%), Query Frame = -2 Query: 188 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLG 592 EIGKG++ EG VA+L G ++ L A L+ G+ TVADARF KP+D L+R L Q+H LITVEEGS+GGFGS+V HF+A GLLD G+K RP+VLPD + + +P +Q AGL HI TAL LG Sbjct: 496 EIGKGRIVKEGTKVAILSLGTRLKEALLAAEDLNARGLSTTVADARFAKPIDEALIRRLAQDHEVLITVEEGSIGGFGSYVLHFLAQSGLLDQGLKVRPMVLPDIFQDQDAPAKQYDEAGLNARHIVETALKALG 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_MESSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp. (strain BNC1) GN=dxs PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.074e-32 Identity = 66/140 (47.14%), Postives = 93/140 (66.43%), Query Frame = -2 Query: 173 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 592 +IGKG++ EG +ALL G + +C+ A L G+ TVADARF KPLD L+R L + H L+TVEEGS+GGFG+HV HF+A +GLL++G+K RP+V+PD +++ A P + A AGL I T + LG+ +A Sbjct: 508 KIGKGRIVREGSKIALLSLGTRLADCMIAAEELEAAGLSTTVADARFAKPLDADLIRRLAREHEVLVTVEEGSIGGFGAHVLHFLAHEGLLENGLKVRPLVMPDIFMDQAKPEKMYAKAGLDAAGIVKTVFAALGQAEQA 647
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_AGRT5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dxs PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.022e-31 Identity = 67/136 (49.26%), Postives = 88/136 (64.71%), Query Frame = -2 Query: 185 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGR 592 +IGKG++ EG VALL +G + CL A L G+ TVADARF KPLD+ L+R+L +H L+T+EEGS+GGFG+HV HF+A GLLD G K R + LPD ++E A P A AGL I +T + LG+ Sbjct: 495 QIGKGRIIKEGTKVALLSFGTRLAECLAAAEDLDAAGLSTTVADARFAKPLDLDLIRQLAAHHEVLVTIEEGSVGGFGAHVLHFMASAGLLDHGPKVRTLTLPDQWVEQAKPETMYANAGLDRAGIVSTVFNALGQ 630
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS_BEII9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dxs PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.449e-31 Identity = 72/141 (51.06%), Postives = 93/141 (65.96%), Query Frame = -2 Query: 173 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLD-SGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREA 592 +IG+G++ EG VALL G + KA L+ GI VTVADARF KPLD+ LVR L +NH LIT+EEGS+GGFGS V +A +GLLD +G+K+R +VLPD +++H P + A AGL I A L+ LGR EA Sbjct: 496 DIGRGRIVREGTTVALLSLGTRLAEASKAAEQLASYGISVTVADARFAKPLDLDLVRRLAKNHEVLITIEEGSVGGFGSFVMQALAEEGLLDGTGLKFRSMVLPDTFLDHDKPEKLYAQAGLDAKGIVAKVLATLGRENEA 636
BLAST of DT214510 vs. ExPASy Swiss-Prot
Match: DXS1_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.683e-31 Identity = 71/148 (47.97%), Postives = 93/148 (62.84%), Query Frame = -2 Query: 149 EIGKGKVFVEGKDVALLGYGAMVQNCLKARALLSKLGIDVTVADARFCKPLDIKLVRELCQNHTFLITVEEGSLGGFGSHVSHFIALDGLLDSGVKWRPIVLPDNYIEHASPTQQLALAGLTGHHIAATALSLLGRTREALLLMC*KP 592 E G+G+V EG DVA+L +GA + L+A LL G+ VTVADARF +PLD L+ +L ++H L+TVE+G++GGFG+HV H++A G D G+ R + LPD +IE ASP A AGL IAATA L R R L KP Sbjct: 498 EPGRGRVVREGTDVAILSFGAHLHEALQAAKLLEAEGVSVTVADARFSRPLDTGLIDQLVRHHAALVTVEQGAMGGFGAHVMHYLANSGGFDGGLALRVMTLPDRFIEQASPEDMYADAGLRAEDIAATARGALARGRVMPLRQTAKP 645 The following BLAST results are available for this feature:
BLAST of DT214510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 283
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Sequences
The
following sequences are available for this feature:
EST sequence >DT214510 ID=DT214510; Name=DT214510; organism=Citrus sinensis; type=EST; length=722bpback to top |