CN189618
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A2_HUMAN (Eukaryotic translation initiation factor 5A-2 OS=Homo sapiens GN=EIF5A2 PE=1 SV=3) HSP 1 Score: 173.326 bits (438), Expect = 1.215e-42 Identity = 84/142 (59.15%), Postives = 108/142 (76.06%), Query Frame = 1 Query: 55 DAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 480 DAGAS T+P Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN D P++ R DYQLI I +DG++SLLTETG ++DL+LP E L +I+ + G+D+ V+VM +M EE A+K Sbjct: 11 DAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A2_CHICK (Eukaryotic translation initiation factor 5A-2 OS=Gallus gallus GN=EIF5A2 PE=1 SV=3) HSP 1 Score: 172.17 bits (435), Expect = 2.708e-42 Identity = 82/142 (57.75%), Postives = 110/142 (77.46%), Query Frame = 1 Query: 55 DAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 480 DAGAS T+P Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIFNGKK EDI PS+HN D P++ R DYQLI I +DG++SLLTE+G ++DL+LP + +L +I+ F +D+ ++V+S+M EE A+K Sbjct: 11 DAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPNIKRNDYQLIGI-QDGYLSLLTESGEVREDLKLP-EGDLGKEIEGKFNANEDVQISVISAMNEECAVAIK 150
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A1_RABIT (Eukaryotic translation initiation factor 5A-1 OS=Oryctolagus cuniculus GN=EIF5A PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 7.878e-42 Identity = 80/142 (56.34%), Postives = 110/142 (77.46%), Query Frame = 1 Query: 55 DAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 480 DAGAS TFP Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ + G+++++TV+S+M EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDSGEEILITVLSAMTEEAAVAIK 150
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A1_RAT (Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus GN=Eif5a PE=1 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 2.292e-41 Identity = 80/142 (56.34%), Postives = 110/142 (77.46%), Query Frame = 1 Query: 55 DAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 480 DAGAS TFP Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ + G+++++TV+S+M EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A1_MOUSE (Eukaryotic translation initiation factor 5A-1 OS=Mus musculus GN=Eif5a PE=1 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 2.292e-41 Identity = 80/142 (56.34%), Postives = 110/142 (77.46%), Query Frame = 1 Query: 55 DAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 480 DAGAS TFP Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ + G+++++TV+S+M EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A1_HUMAN (Eukaryotic translation initiation factor 5A-1 OS=Homo sapiens GN=EIF5A PE=1 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 2.292e-41 Identity = 80/142 (56.34%), Postives = 110/142 (77.46%), Query Frame = 1 Query: 55 DAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 480 DAGAS TFP Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ + G+++++TV+S+M EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A1_BOVIN (Eukaryotic translation initiation factor 5A-1 OS=Bos taurus GN=EIF5A PE=2 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 2.292e-41 Identity = 80/142 (56.34%), Postives = 110/142 (77.46%), Query Frame = 1 Query: 55 DAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 480 DAGAS TFP Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DG++SLL ++G ++DLRLP + +L +I+ + G+++++TV+S+M EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVREDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A_NEUCR (Eukaryotic translation initiation factor 5A OS=Neurospora crassa GN=tif-51 PE=2 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.258e-39 Identity = 84/159 (52.83%), Postives = 108/159 (67.92%), Query Frame = 1 Query: 22 SDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPKN 498 + EH F+S DAGAS T+P Q +RK G++VIKNRPCK+V++STSKTGKHGHAK H V IDIF GKKLED+ PS+HN D P+V RTDYQ I ED F+ L+ G K D+++P E L +I+ EGKD V V ++MGEE +K+ K+ Sbjct: 8 AQHEHTFDS-VDAGASATYPMQCSALRKGGHVVIKNRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLCPSTHNMDVPNVKRTDYQFSYIDED-FLVLIDSNGEEKRDVKMPEGE-LAKRIEKLEEEGKDFFVGVQTAMGEEAAIDVKEASNKD 163
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5AL_HUMAN (Eukaryotic translation initiation factor 5A-1-like OS=Homo sapiens GN=EIF5AL1 PE=1 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.643e-39 Identity = 78/142 (54.93%), Postives = 107/142 (75.35%), Query Frame = 1 Query: 55 DAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 480 DAGAS TFP Q +RKNG++V+K PCK+VE+S SKTGKHGHAK H VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DG++SLL ++G +DLRLP + +L +I+ + G+++++TV+S+M EE A+K Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGI-QDGYLSLLQDSGEVPEDLRLP-EGDLGKEIEQKYDCGEEILITVLSAMTEEAAVAIK 150
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A1_CHICK (Eukaryotic translation initiation factor 5A-1 OS=Gallus gallus GN=EIF5A1 PE=1 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 2.622e-37 Identity = 74/126 (58.73%), Postives = 97/126 (76.98%), Query Frame = 1 Query: 55 DAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLV 432 DAGAS TFP Q +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF GKK EDI PS+HN D P++ R D+QLI I +DGF+SLL ++G ++DLRLP E L +I+ + G++++ Sbjct: 11 DAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRCDFQLIGI-QDGFLSLLQDSGEVREDLRLPEGE-LGREIEQKYDCGEEII 134 The following BLAST results are available for this feature:
BLAST of CN189618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189618 ID=CN189618; Name=CN189618; organism=Citrus sinensis; type=EST; length=746bpback to top |