CN189618
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A_MANES (Eukaryotic translation initiation factor 5A OS=Manihot esculenta PE=2 SV=2) HSP 1 Score: 318.546 bits (815), Expect = 2.339e-86 Identity = 153/160 (95.62%), Postives = 158/160 (98.75%), Query Frame = 1 Query: 19 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPKN 498 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKV+EVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVV+VMS+MGEE+IC+LKDIGPKN Sbjct: 1 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVMEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVSVMSAMGEERICSLKDIGPKN 160
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A2_SOLLC (Eukaryotic translation initiation factor 5A-2 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.017e-81 Identity = 146/160 (91.25%), Postives = 152/160 (95.00%), Query Frame = 1 Query: 19 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPKN 498 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDENLL Q+KDGF EGKDLVV+VMS+MGEEQI A+KD+G KN Sbjct: 1 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDENLLKQVKDGFQEGKDLVVSVMSAMGEEQINAVKDVGTKN 160
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A2_NICPL (Eukaryotic translation initiation factor 5A-2 OS=Nicotiana plumbaginifolia GN=EIF-5A2 PE=2 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 1.328e-81 Identity = 146/159 (91.82%), Postives = 152/159 (95.60%), Query Frame = 1 Query: 19 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 495 MSDEEH FESKADAGASKT+PQQAGTIRKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLTE GNTKDDLRLPTD+NLL+QIKDGFAEGKDLVV+VMS+MGEEQICALKDIGPK Sbjct: 1 MSDEEHQFESKADAGASKTYPQQAGTIRKNGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A1_TOBAC (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana tabacum GN=EIF-5A1 PE=3 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 2.959e-81 Identity = 143/159 (89.94%), Postives = 152/159 (95.60%), Query Frame = 1 Query: 19 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 495 MSDEEHHFESKADAGASKT+PQQAGTIRKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLTE GNTKDDLRLPTD+NLL+ IKDGFAEGKDLV++VMS+MGEEQIC +KD+GPK Sbjct: 1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A1_NICPL (Eukaryotic translation initiation factor 5A-1 OS=Nicotiana plumbaginifolia GN=EIF-5A1 PE=2 SV=1) HSP 1 Score: 301.597 bits (771), Expect = 2.959e-81 Identity = 143/159 (89.94%), Postives = 152/159 (95.60%), Query Frame = 1 Query: 19 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 495 MSDEEHHFESKADAGASKT+PQQAGTIRKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLTE GNTKDDLRLPTD+NLL+ IKDGFAEGKDLV++VMS+MGEEQIC +KD+GPK Sbjct: 1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDNLLALIKDGFAEGKDLVLSVMSAMGEEQICGIKDVGPK 159
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLTU (Eukaryotic translation initiation factor 5A-3 OS=Solanum tuberosum GN=EIF5A3 PE=2 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 5.047e-81 Identity = 145/160 (90.62%), Postives = 152/160 (95.00%), Query Frame = 1 Query: 19 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPKN 498 MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDE+LL Q+KDGF EGKDLVV+VMS+MGEEQI A+KDIG KN Sbjct: 1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDESLLKQVKDGFQEGKDLVVSVMSAMGEEQINAIKDIGTKN 160
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A5_SOLTU (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum GN=EIF5A5 PE=2 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 8.609e-81 Identity = 142/159 (89.31%), Postives = 152/159 (95.60%), Query Frame = 1 Query: 19 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 495 MSDEEHHFESKADAGASKT+PQQAGTIRK+G+IVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLTE GNTKDDLRLPTD+ LL+Q+KDGFAEGKDLV++VMS+MGEEQIC +KDIGPK Sbjct: 1 MSDEEHHFESKADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLLC (Eukaryotic translation initiation factor 5A-1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 1.124e-80 Identity = 142/159 (89.31%), Postives = 151/159 (94.97%), Query Frame = 1 Query: 19 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 495 MSDEEHHFESKADAGASKT+PQQAGTIRK G+IVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLTE GNTKDDLRLPTD+ LL+Q+KDGFAEGKDLV++VMS+MGEEQIC +KDIGPK Sbjct: 1 MSDEEHHFESKADAGASKTYPQQAGTIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLAQVKDGFAEGKDLVLSVMSAMGEEQICGIKDIGPK 159
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A2_MEDSA (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 1.918e-80 Identity = 142/159 (89.31%), Postives = 153/159 (96.23%), Query Frame = 1 Query: 19 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 495 MSDEEHHFE ADAGASKT+PQQAGTIRKNGYIVIK+RPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLT+ G+TKDDL+LPTD++LL+QIKDGFA+GKDLVV+VMS+MGEEQICALKDIGPK Sbjct: 1 MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDDSLLTQIKDGFADGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of CN189618 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLLC (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 2.505e-80 Identity = 146/159 (91.82%), Postives = 150/159 (94.34%), Query Frame = 1 Query: 19 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 495 MSDEEH FESKADAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLT+ GNTKDDLRLPTDENLLS IKDGFAEGKDLVV+VMS+MGEEQI ALKDIGPK Sbjct: 1 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159 The following BLAST results are available for this feature:
BLAST of CN189618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189618 ID=CN189618; Name=CN189618; organism=Citrus sinensis; type=EST; length=746bpback to top |