CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 7.907e-32 Identity = 74/131 (56.49%), Postives = 94/131 (71.76%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA NAT AA+ EGIVPGGG L++L+ V IK D +E++GADIV++AL AP IA NA K S++ TGYNA T ++E+++ AG+IDPAKV R ALQNAAS+AG+VLTT+AI Sbjct: 390 RKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIKKNF-DEEEKIGADIVKRALEAPLRQIADNAGVEGSVIVSRVKDSDFNTGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAI 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_SYNJA (60 kDa chaperonin 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL1 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.005e-31 Identity = 74/131 (56.49%), Postives = 90/131 (68.70%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA NAT AA+EEGIVPGGGA L+HLS +PA K L +A+E++GADIV +AL AP IAHNA E G++A+T Y +M G++DPAKV R ALQNAAS+A M LTT+AI Sbjct: 391 RKLRIEDALNATRAAVEEGIVPGGGATLLHLSKGIPAFKANL-NAEEQVGADIVCRALQAPLYQIAHNAGLEGSVVVEKVLEKEMPFGFDALTGTYVDMFAQGIVDPAKVVRSALQNAASIAAMYLTTEAI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 3.924e-31 Identity = 73/131 (55.73%), Postives = 93/131 (70.99%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA NAT AA+ EGIVPGGG L++L+ V IK D +E++GADIV++AL AP IA NA K S++ GYNA T ++E+++ AG+IDPAKV R ALQNAAS+AG+VLTT+AI Sbjct: 390 RKLRIEDALNATKAAVAEGIVPGGGKTLIYLASKVDEIKKNF-DEEEKIGADIVKRALEAPLRQIADNAGAEGSVIVSRVKDSDFNIGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAI 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_SYNY3 (60 kDa chaperonin 2 OS=Synechocystis sp. (strain PCC 6803) GN=groL2 PE=1 SV=4) HSP 1 Score: 132.88 bits (333), Expect = 1.142e-30 Identity = 70/131 (53.44%), Postives = 90/131 (68.70%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA NAT AA+EEGIVPGGG L+ L+ + + K +L + +ER+ ADI+ KAL AP +A NA K + GYN +T K E+++ AG+IDPAKV R ALQNAAS+AGMVLTT+A+ Sbjct: 392 RKLRIEDALNATKAAVEEGIVPGGGTTLIRLAGKIESFKAQLSNDEERVAADIIAKALEAPLHQLASNAGVEGSVIVEKVKEATGNQGYNVITGKIEDLIAAGIIDPAKVVRSALQNAASIAGMVLTTEAL 522
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 5.666e-30 Identity = 72/131 (54.96%), Postives = 90/131 (68.70%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA NAT AAI EGIVPGGG AL+HL+ + D L +E++GA I+QKAL P IA NA + E+ G+NAMT++YE+++ AG+IDP KVTR ALQNAAS+A MVLTT+ I Sbjct: 390 RKLRIEDAVNATKAAIAEGIVPGGGTALLHLAAGMGGFIDSLS-GEEKIGARIIQKALEGPLRQIAENAGLEGSVIAEKVRNLEFNFGFNAMTNEYEDLVAAGIIDPVKVTRSALQNAASIAAMVLTTECI 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_SYNP6 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groL2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 9.665e-30 Identity = 66/131 (50.38%), Postives = 92/131 (70.23%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA NAT AAIEEG+VPGGG L+HL+ + +++ L ADE+LG +IV +AL AP IA NA + ++ GYNA+T +YE+++ +G++DPAKV R ALQ+AASVA ++LTT+ + Sbjct: 391 RKLRIEDALNATRAAIEEGVVPGGGTTLLHLASALTSLQASLTVADEKLGVEIVARALEAPLRQIADNAGAEGSVVVEKLRDKDFNFGYNALTGQYEDLVASGILDPAKVVRSALQDAASVASLILTTEVL 521
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.649e-29 Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA NAT AA+EEGIVPGGG L+HL+ + AIK L D DE+ GAD++ +AL AP IA NA + ++ GY+AM ++ +ML AGV DPAKV R ALQNAAS+A MVLTT+ + Sbjct: 391 RKLRIEDALNATKAAVEEGIVPGGGTTLLHLTKKIDAIKAGLAD-DEKTGADLIARALEAPLRQIADNAGVEGSVIAQKVRELDFNIGYDAMKGEFVDMLAAGVADPAKVVRSALQNAASIAAMVLTTEVL 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_THEEB (60 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groL PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.812e-29 Identity = 70/131 (53.44%), Postives = 87/131 (66.41%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLR+EDA NAT AA+EEGIVPGGG LVHL+ + + +E +GA+IV++AL AP IA NA K + GY+A D+Y NM AG++DPAKVTR ALQNAAS+AGMVLTT+ I Sbjct: 390 RKLRLEDAINATKAAVEEGIVPGGGTTLVHLAPELSNWAAEHLTGEELIGANIVERALSAPLRRIAENAGQNGAIIVERVKEKPFDVGYDAAKDEYVNMFDAGIVDPAKVTRSALQNAASIAGMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_THEVL (60 kDa chaperonin 1 OS=Thermosynechococcus vulcanus GN=groL1 PE=3 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 2.812e-29 Identity = 70/131 (53.44%), Postives = 87/131 (66.41%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLR+EDA NAT AA+EEGIVPGGG LVHL+ + + +E +GA+IV++AL AP IA NA K + GY+A D+Y NM AG++DPAKVTR ALQNAAS+AGMVLTT+ I Sbjct: 390 RKLRLEDAINATKAAVEEGIVPGGGTTLVHLAPELSNWAAEHLTGEELIGANIVERALSAPLRRIAENAGQNGAIIVERVKEKPFDVGYDAAKDEYVNMFDAGIVDPAKVTRSALQNAASIAGMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_THEVL (60 kDa chaperonin 2 OS=Thermosynechococcus vulcanus GN=groL2 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.797e-29 Identity = 68/131 (51.91%), Postives = 88/131 (67.18%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLR+EDA NAT AA+ EGIVPGGG L+HL+ + A+ L +E+ GA IV AL AP + IA NA +A ++ G+NA T YE+++ AG+IDPAKV R ALQNA S+AGMVLTT+A+ Sbjct: 390 RKLRLEDALNATKAAVAEGIVPGGGVTLLHLASRIDALLPSLSP-EEQTGARIVASALAAPVAQIADNAGAEGAVVVENVRAGDFNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSIAGMVLTTEAL 519 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |