CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LACLA (60 kDa chaperonin OS=Lactococcus lactis subsp. lactis GN=groL PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 8.467e-26 Identity = 65/130 (50.00%), Postives = 87/130 (66.92%), Query Frame = -3 Query: 191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580 KL IEDA NAT AA+EEGIV GGG ALV+ + A+ E+ D + G +IV++AL P IA NA ++ E TG+NA T ++ NM++ G++DPAKVTR ALQNAASVAG++LTT+A+ Sbjct: 391 KLLIEDALNATRAAVEEGIVSGGGTALVNA---IAALDKLSEEGDIQTGINIVRRALEEPVRQIAANAGYEGSVIIDKLRSEEVGTGFNAATGQWVNMIEEGIVDPAKVTRSALQNAASVAGLILTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CHLPN (60 kDa chaperonin OS=Chlamydia pneumoniae GN=groL PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 8.467e-26 Identity = 60/131 (45.80%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R++DA++AT AA+EEGI+PGGG ALV + A L + DE +G I+ KAL AP IA NA A GY+A+ D Y +M+ AG++DP KVTR AL++AAS+AG++LTT+A+ Sbjct: 392 KKDRVDDAQHATIAAVEEGILPGGGTALVRCIPTLEAFLPMLANEDEAIGTRIILKALTAPLKQIASNAGKEGAIICQQVLARSANEGYDALRDAYTDMIDAGILDPTKVTRSALESAASIAGLLLTTEAL 522
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_MOOTA (60 kDa chaperonin 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.467e-26 Identity = 63/131 (48.09%), Postives = 89/131 (67.94%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA AT AA+EEGIVPGGGA LVH +PA++ + DE +G IV++AL P IA NA ++ + G++A+ ++Y +M++AG++DPAKVTR ALQNAAS+A M+LTT+AI Sbjct: 391 KKHRVEDALAATRAAVEEGIVPGGGATLVHA---IPAVEKIQAEGDEAVGVRIVRRALEEPLRQIAANAGLEGSVIVERVRSEQPGIGFDAVKEEYVDMIKAGIVDPAKVTRSALQNAASIASMLLTTEAI 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: RUBC_CHLRE (RuBisCO large subunit-binding protein subunit beta-2 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25 Identity = 61/133 (45.86%), Postives = 86/133 (64.66%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA--XXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIV GGG L+ LS V +IK+ L + ++++GADI+++AL P LIA+NA + GYNA TD +E++++AG+IDP KV RC+L+NA SVA L + Sbjct: 107 KKLRVEDALNATKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGTNGSVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTFLLADVV 239
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STRAG (60 kDa chaperonin OS=Streptococcus agalactiae GN=groL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25 Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = -3 Query: 191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580 KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K + DE G +IV +AL P IA+NA K SE TG+NA ++ +M+ G+IDP KVTR ALQNAASVA ++LTT+A+ Sbjct: 391 KLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYKGSVIIARLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STRA5 (60 kDa chaperonin OS=Streptococcus agalactiae serotype V GN=groL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25 Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = -3 Query: 191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580 KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K + DE G +IV +AL P IA+NA K SE TG+NA ++ +M+ G+IDP KVTR ALQNAASVA ++LTT+A+ Sbjct: 391 KLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STRA3 (60 kDa chaperonin OS=Streptococcus agalactiae serotype III GN=groL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25 Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = -3 Query: 191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580 KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K + DE G +IV +AL P IA+NA K SE TG+NA ++ +M+ G+IDP KVTR ALQNAASVA ++LTT+A+ Sbjct: 391 KLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STRA1 (60 kDa chaperonin OS=Streptococcus agalactiae serotype Ia GN=groL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25 Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = -3 Query: 191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580 KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K + DE G +IV +AL P IA+NA K SE TG+NA ++ +M+ G+IDP KVTR ALQNAASVA ++LTT+A+ Sbjct: 391 KLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CARHZ (60 kDa chaperonin OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=groL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25 Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLRIEDA NAT AA+EEGIV GGG +H+ + + +K DER G IV+KAL P IA NA K G+NA+T++Y +M+ AG++DPAKVTR ALQNAASVA M+LTT+A+ Sbjct: 391 KKLRIEDALNATRAAVEEGIVAGGGTTYIHIIKALEEL-EKTATGDERTGIAIVRKALEEPLKQIAINAGLEGSVIVEKVKTLPVGHGFNALTEEYVDMIAAGIVDPAKVTRSALQNAASVAAMLLTTEAL 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BACA2 (60 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25 Identity = 65/131 (49.62%), Postives = 87/131 (66.41%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA N+T AA+EEGIV GGG ALV++ + V A++ + D + G +IV +AL P IAHNA K + G+NA T ++ NM++ G++DP KVTR ALQNAASVA M+LTT+A+ Sbjct: 390 RKLRIEDALNSTRAAVEEGIVSGGGTALVNVYNKVAAVE---AEGDAQTGINIVLRALEEPIRQIAHNAGLEGSVIVERLKNEKIGVGFNAATGEWVNMIEKGIVDPTKVTRSALQNAASVAAMLLTTEAV 517 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |