CN189514

Overview
NameCN189514
Unique NameCN189514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LACLA (60 kDa chaperonin OS=Lactococcus lactis subsp. lactis GN=groL PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 8.467e-26
Identity = 65/130 (50.00%), Postives = 87/130 (66.92%), Query Frame = -3
Query:  191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580
            KL IEDA NAT AA+EEGIV GGG ALV+    + A+    E+ D + G +IV++AL  P   IA NA           ++ E  TG+NA T ++ NM++ G++DPAKVTR ALQNAASVAG++LTT+A+
Sbjct:  391 KLLIEDALNATRAAVEEGIVSGGGTALVNA---IAALDKLSEEGDIQTGINIVRRALEEPVRQIAANAGYEGSVIIDKLRSEEVGTGFNAATGQWVNMIEEGIVDPAKVTRSALQNAASVAGLILTTEAV 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CHLPN (60 kDa chaperonin OS=Chlamydia pneumoniae GN=groL PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 8.467e-26
Identity = 60/131 (45.80%), Postives = 84/131 (64.12%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +K R++DA++AT AA+EEGI+PGGG ALV     + A    L + DE +G  I+ KAL AP   IA NA            A     GY+A+ D Y +M+ AG++DP KVTR AL++AAS+AG++LTT+A+
Sbjct:  392 KKDRVDDAQHATIAAVEEGILPGGGTALVRCIPTLEAFLPMLANEDEAIGTRIILKALTAPLKQIASNAGKEGAIICQQVLARSANEGYDALRDAYTDMIDAGILDPTKVTRSALESAASIAGLLLTTEAL 522          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_MOOTA (60 kDa chaperonin 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 8.467e-26
Identity = 63/131 (48.09%), Postives = 89/131 (67.94%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +K R+EDA  AT AA+EEGIVPGGGA LVH    +PA++    + DE +G  IV++AL  P   IA NA           ++ +   G++A+ ++Y +M++AG++DPAKVTR ALQNAAS+A M+LTT+AI
Sbjct:  391 KKHRVEDALAATRAAVEEGIVPGGGATLVHA---IPAVEKIQAEGDEAVGVRIVRRALEEPLRQIAANAGLEGSVIVERVRSEQPGIGFDAVKEEYVDMIKAGIVDPAKVTRSALQNAASIASMLLTTEAI 518          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: RUBC_CHLRE (RuBisCO large subunit-binding protein subunit beta-2 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25
Identity = 61/133 (45.86%), Postives = 86/133 (64.66%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA--XXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +KLR+EDA NAT AA+EEGIV GGG  L+ LS  V +IK+ L + ++++GADI+++AL  P  LIA+NA                +   GYNA TD +E++++AG+IDP KV RC+L+NA SVA   L    +
Sbjct:  107 KKLRVEDALNATKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGTNGSVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTFLLADVV 239          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STRAG (60 kDa chaperonin OS=Streptococcus agalactiae GN=groL PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25
Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = -3
Query:  191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580
            KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K    + DE  G +IV +AL  P   IA+NA           K SE  TG+NA   ++ +M+  G+IDP KVTR ALQNAASVA ++LTT+A+
Sbjct:  391 KLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYKGSVIIARLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAV 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STRA5 (60 kDa chaperonin OS=Streptococcus agalactiae serotype V GN=groL PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25
Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = -3
Query:  191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580
            KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K    + DE  G +IV +AL  P   IA+NA           K SE  TG+NA   ++ +M+  G+IDP KVTR ALQNAASVA ++LTT+A+
Sbjct:  391 KLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAV 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STRA3 (60 kDa chaperonin OS=Streptococcus agalactiae serotype III GN=groL PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25
Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = -3
Query:  191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580
            KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K    + DE  G +IV +AL  P   IA+NA           K SE  TG+NA   ++ +M+  G+IDP KVTR ALQNAASVA ++LTT+A+
Sbjct:  391 KLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAV 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STRA1 (60 kDa chaperonin OS=Streptococcus agalactiae serotype Ia GN=groL PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25
Identity = 67/130 (51.54%), Postives = 86/130 (66.15%), Query Frame = -3
Query:  191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580
            KLRIEDA NAT AA+EEGIV GGG ALV++ + V A+K    + DE  G +IV +AL  P   IA+NA           K SE  TG+NA   ++ +M+  G+IDP KVTR ALQNAASVA ++LTT+A+
Sbjct:  391 KLRIEDALNATRAAVEEGIVSGGGTALVNVIEKVAALK---LNGDEETGRNIVLRALEEPVRQIAYNAGYEGSVIIERLKQSEIGTGFNAANGEWVDMVTTGIIDPVKVTRSALQNAASVASLILTTEAV 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CARHZ (60 kDa chaperonin OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=groL PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25
Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +KLRIEDA NAT AA+EEGIV GGG   +H+   +  + +K    DER G  IV+KAL  P   IA NA           K      G+NA+T++Y +M+ AG++DPAKVTR ALQNAASVA M+LTT+A+
Sbjct:  391 KKLRIEDALNATRAAVEEGIVAGGGTTYIHIIKALEEL-EKTATGDERTGIAIVRKALEEPLKQIAINAGLEGSVIVEKVKTLPVGHGFNALTEEYVDMIAAGIVDPAKVTRSALQNAASVAAMLLTTEAL 520          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BACA2 (60 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groL PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.106e-25
Identity = 65/131 (49.62%), Postives = 87/131 (66.41%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            RKLRIEDA N+T AA+EEGIV GGG ALV++ + V A++    + D + G +IV +AL  P   IAHNA           K  +   G+NA T ++ NM++ G++DP KVTR ALQNAASVA M+LTT+A+
Sbjct:  390 RKLRIEDALNSTRAAVEEGIVSGGGTALVNVYNKVAAVE---AEGDAQTGINIVLRALEEPIRQIAHNAGLEGSVIVERLKNEKIGVGFNAATGEWVNMIEKGIVDPTKVTRSALQNAASVAAMLLTTEAV 517          
The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_LACLA8.467e-2650.0060 kDa chaperonin OS=Lactococcus lactis subsp. lac... [more]
CH60_CHLPN8.467e-2645.8060 kDa chaperonin OS=Chlamydia pneumoniae GN=groL ... [more]
CH601_MOOTA8.467e-2648.0960 kDa chaperonin 1 OS=Moorella thermoacetica (str... [more]
RUBC_CHLRE1.106e-2545.86RuBisCO large subunit-binding protein subunit beta... [more]
CH60_STRAG1.106e-2551.5460 kDa chaperonin OS=Streptococcus agalactiae GN=g... [more]
CH60_STRA51.106e-2551.5460 kDa chaperonin OS=Streptococcus agalactiae sero... [more]
CH60_STRA31.106e-2551.5460 kDa chaperonin OS=Streptococcus agalactiae sero... [more]
CH60_STRA11.106e-2551.5460 kDa chaperonin OS=Streptococcus agalactiae sero... [more]
CH60_CARHZ1.106e-2550.3860 kDa chaperonin OS=Carboxydothermus hydrogenofor... [more]
CH60_BACA21.106e-2549.6260 kDa chaperonin OS=Bacillus amyloliquefaciens (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001P19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTAAAAGACACGATTTTATATCAATTAAGTAAAAC
TTGTCTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAAACCTC
CTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTGTGGCG
GAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAGCCTGA
GTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCACATCT
TGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTCATACT
TGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTAGCTTTCACCTTC
TCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGTGATGC
AGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTCATCTG
CATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGATGAACC
AGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCAAAAGT
TGCATTCTTGGCATCTTCAATACGGAGTTTACGGT
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