CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_EUBR3 (60 kDa chaperonin OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=groL PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.444e-25 Identity = 65/129 (50.39%), Postives = 84/129 (65.12%), Query Frame = -3 Query: 194 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 580 KLR+EDA NAT AA+EEGI+ GGG+A +H S V + D LE DE+ GA ++ KAL AP IA NA K S TG+NA T++Y +M+ G++DP KVTR ALQNA SVA +LTT++ Sbjct: 391 KLRMEDALNATRAAVEEGIIAGGGSAYIHASKKVAELVDTLE-GDEKTGAKVILKALEAPLYYIAANAGLEGAVIINKVKESAPGTGFNAATEEYVDMVDNGILDPVKVTRSALQNATSVASTLLTTES 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_THENE (60 kDa chaperonin OS=Thermotoga neapolitana GN=groL PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 66/132 (50.00%), Postives = 87/132 (65.91%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K RIEDA +AT AA+EEGIVPGGG L+ V + ++L D DE++GA IV KAL AP IA NA AS+ G++A+ ++ NM + G+IDPAKVTR ALQNAAS+AGM+LTT+ + Sbjct: 390 KKHRIEDALSATRAAVEEGIVPGGGVTLLRSRKAVEKLLEEL-DGDEKIGAQIVYKALSAPIRQIAENAGYDGAVIIEKILASDDPAYGFDALRGEFGNMFEKGIIDPAKVTRSALQNAASIAGMLLTTEVL 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STRS7 (60 kDa chaperonin OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=groL PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = -3 Query: 191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580 KLRIEDA NAT AA+EEGIV GGG AL+++ D V A++ D D G +IV +AL P IA+NA K S G+NA T ++ +M+ G+IDP KVTR ALQNAASVAG++LTT+A+ Sbjct: 391 KLRIEDALNATRAAVEEGIVAGGGTALINVMDKVAALE---LDGDAATGRNIVLRALEEPVRQIAYNAGYEGSVIIDKLKNSAAGVGFNAATGEWVDMIATGIIDPVKVTRSALQNAASVAGLILTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STRGN (60 kDa chaperonin OS=Streptococcus gordonii GN=groL PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 68/130 (52.31%), Postives = 84/130 (64.62%), Query Frame = -3 Query: 191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580 KLRIEDA NAT AA+EEGIV GGG A V + D V ++ DE G +IV +AL P IA NA K SE TG+NA T ++ NM++AG+IDP KVTR ALQNAASVA ++LTT+A+ Sbjct: 391 KLRIEDALNATRAAVEEGIVSGGGTAFVSVLDAVAGLE---LTGDEATGRNIVLRALEEPVRQIALNAGFEGSIVIDRLKNSEAGTGFNAATGEWVNMIEAGIIDPVKVTRSALQNAASVASLILTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STREM (60 kDa chaperonin OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=groL PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = -3 Query: 191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580 KLRIEDA NAT AA+EEGIV GGG AL+++ D V A++ D D G +IV +AL P IA+NA K S G+NA T ++ +M+ G+IDP KVTR ALQNAASVAG++LTT+A+ Sbjct: 391 KLRIEDALNATRAAVEEGIVAGGGTALINVMDKVAALE---LDGDAATGRNIVLRALEEPVRQIAYNAGYEGSVIIDKLKNSAAGVGFNAATGEWVDMIATGIIDPVKVTRSALQNAASVAGLILTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STAAR (60 kDa chaperonin OS=Staphylococcus aureus (strain MRSA252) GN=groL PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 67/131 (51.15%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA N+T AA+EEGIV GGG ALV++ V I+ + D G +IV KAL AP IA NA K +E G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+ Sbjct: 390 RKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEVGIVDPTKVTRSALQHAASVAAMFLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_METVS (60 kDa chaperonin OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=groL PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 65/131 (49.62%), Postives = 88/131 (67.18%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLRIEDA NAT AAIEEGIV GGG L+ + + + + +ER+G +IV+KAL AP IA NA K +E G++A ++Y +M+++G+IDPAKVTR ALQN+ASVA +VLTT+AI Sbjct: 390 KKLRIEDALNATKAAIEEGIVSGGGTVLIEILKEMESFE---LSGEERIGVNIVKKALTAPLKQIAENAGLEGSIVVEKVKNAESGIGFDAAKEEYVDMIKSGIIDPAKVTRSALQNSASVAALVLTTEAI 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LACRJ (60 kDa chaperonin OS=Lactobacillus reuteri (strain JCM 1112) GN=groL PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 66/132 (50.00%), Postives = 89/132 (67.42%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K RIEDA NAT AA++EG VPGGG AL+++ +PA+ DK+E D DE G +IV+ AL AP IA NA K + GYNA K+E+M++AG++DP VTR ALQNAASV+ ++LTT+A+ Sbjct: 390 KKYRIEDALNATRAAVQEGFVPGGGTALINV---IPAL-DKIEADGDELTGINIVKAALEAPVRQIAENAGVEGSVIVNELKNEKEGIGYNAADGKFEDMIKAGIVDPTMVTRSALQNAASVSALLLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LACRD (60 kDa chaperonin OS=Lactobacillus reuteri (strain DSM 20016) GN=groL PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 66/132 (50.00%), Postives = 89/132 (67.42%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K RIEDA NAT AA++EG VPGGG AL+++ +PA+ DK+E D DE G +IV+ AL AP IA NA K + GYNA K+E+M++AG++DP VTR ALQNAASV+ ++LTT+A+ Sbjct: 390 KKYRIEDALNATRAAVQEGFVPGGGTALINV---IPAL-DKIEADGDELTGINIVKAALEAPVRQIAENAGVEGSVIVNELKNEKEGIGYNAADGKFEDMIKAGIVDPTMVTRSALQNAASVSALLLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_EXISA (60 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groL PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25 Identity = 67/133 (50.38%), Postives = 86/133 (64.66%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED--ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA NAT AA+EEGIV GGG +L+++ +PA++ L + ADE G +V +AL AP IA NA K GYNA T +Y +M+ G++DPAKVTR ALQNAASV+ M LTT+A+ Sbjct: 390 RKLRIEDALNATRAAVEEGIVAGGGTSLINV---IPAVRALLSEVTADEATGVKLVLRALEAPVRQIAENAGEEGSVIVEKLKNESVGVGYNAATGEYVDMIAHGIVDPAKVTRSALQNAASVSAMFLTTEAV 519 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |