CN189514

Overview
NameCN189514
Unique NameCN189514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH603_ACAM1 (60 kDa chaperonin 3 OS=Acaryochloris marina (strain MBIC 11017) GN=groL3 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25
Identity = 63/131 (48.09%), Postives = 84/131 (64.12%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            RKL++EDA NAT AA+EEGIVPGGG  LVHL+  +     +    DE +GA I+ ++L AP   I  NA           K   + TGY+A+ ++Y +M  AG++DPAKVT   L+NAAS+AGMVLTT+ I
Sbjct:  391 RKLKLEDAINATQAAVEEGIVPGGGTTLVHLAPQLEDWSAEHLVGDELIGAMILVRSLSAPLRQIVENAGLNGGVVVEQVKTLPFNTGYDALNNQYVDMFTAGIVDPAKVTSAGLRNAASIAGMVLTTECI 521          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_PARUW (60 kDa chaperonin 2 OS=Protochlamydia amoebophila (strain UWE25) GN=groL2 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.886e-25
Identity = 61/131 (46.56%), Postives = 85/131 (64.89%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +K R++DA+ AT AA+EEGI+PGGG A +     V ++ D LE  DE+ GA I+ ++L AP   IA NA           +  +   GYNA+T +Y +M+ AG++DP KV RCAL+NA SVA M+LTT+AI
Sbjct:  392 KKDRVDDAQRATAAAVEEGILPGGGTAFIRCIPAVNSLADSLE-GDEKTGAKIMARSLSAPLRQIAENAGQEGAIILQAVEKMKEKEGYNALTGEYVDMITAGILDPTKVVRCALENAVSVAAMLLTTEAI 521          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STRE4 (60 kDa chaperonin OS=Streptococcus equi subsp. equi (strain 4047) GN=groL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25
Identity = 66/130 (50.77%), Postives = 85/130 (65.38%), Query Frame = -3
Query:  191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580
            KLRIEDA NAT AA+EEGIV GGG AL+++ D V A++    D D   G +IV +AL  P   IA+NA           K S    G+NA T ++ +M+  G+IDP KVTR ALQNAASVAG++LTT+A+
Sbjct:  391 KLRIEDALNATRAAVEEGIVAGGGTALINVMDKVAALE---LDGDAATGRNIVLRALEEPVRQIAYNAGYEGSVIIDKLKNSAAGIGFNAATGEWVDMIATGIIDPVKVTRSALQNAASVAGLILTTEAV 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STAAT (60 kDa chaperonin OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=groL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25
Identity = 67/131 (51.15%), Postives = 85/131 (64.89%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA           K +E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  390 RKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STAAE (60 kDa chaperonin OS=Staphylococcus aureus (strain Newman) GN=groL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25
Identity = 67/131 (51.15%), Postives = 85/131 (64.89%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA           K +E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  390 RKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STAAC (60 kDa chaperonin OS=Staphylococcus aureus (strain COL) GN=groL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25
Identity = 67/131 (51.15%), Postives = 85/131 (64.89%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA           K +E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  390 RKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STAA8 (60 kDa chaperonin OS=Staphylococcus aureus (strain NCTC 8325) GN=groL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25
Identity = 67/131 (51.15%), Postives = 85/131 (64.89%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA           K +E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  390 RKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STAA3 (60 kDa chaperonin OS=Staphylococcus aureus (strain USA300) GN=groL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25
Identity = 67/131 (51.15%), Postives = 85/131 (64.89%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            RKLRIEDA N+T AA+EEGIV GGG ALV++   V  I+    + D   G +IV KAL AP   IA NA           K +E   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  390 RKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LACLS (60 kDa chaperonin OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=groL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25
Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = -3
Query:  191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580
            KL IEDA NAT AA+EEGIV GGG ALV+    + A+    E+ D + G +IV++AL  P   IA NA           ++ +  TG+NA T ++ NM++ G++DPAKVTR ALQNAASVAG++LTT+A+
Sbjct:  391 KLLIEDALNATRAAVEEGIVSGGGTALVNA---IAALDKLSEEGDIQTGINIVRRALEEPVRQIAANAGYEGSVIIDKLRSEKVGTGFNAATGQWVNMIEEGIVDPAKVTRSALQNAASVAGLILTTEAV 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LACLM (60 kDa chaperonin OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=groL PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25
Identity = 64/130 (49.23%), Postives = 87/130 (66.92%), Query Frame = -3
Query:  191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580
            KL IEDA NAT AA+EEGIV GGG ALV+    + A+    E+ D + G +IV++AL  P   IA NA           ++ +  TG+NA T ++ NM++ G++DPAKVTR ALQNAASVAG++LTT+A+
Sbjct:  391 KLLIEDALNATRAAVEEGIVSGGGTALVNA---IAALDKLSEEGDIQTGINIVRRALEEPVRQIAANAGYEGSVIIDKLRSEKVGTGFNAATGQWVNMIEEGIVDPAKVTRSALQNAASVAGLILTTEAV 517          
The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH603_ACAM11.886e-2548.0960 kDa chaperonin 3 OS=Acaryochloris marina (strai... [more]
CH602_PARUW1.886e-2546.5660 kDa chaperonin 2 OS=Protochlamydia amoebophila ... [more]
CH60_STRE42.464e-2550.7760 kDa chaperonin OS=Streptococcus equi subsp. equ... [more]
CH60_STAAT2.464e-2551.1560 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_STAAE2.464e-2551.1560 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_STAAC2.464e-2551.1560 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_STAA82.464e-2551.1560 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_STAA32.464e-2551.1560 kDa chaperonin OS=Staphylococcus aureus (strain... [more]
CH60_LACLS2.464e-2549.2360 kDa chaperonin OS=Lactococcus lactis subsp. cre... [more]
CH60_LACLM2.464e-2549.2360 kDa chaperonin OS=Lactococcus lactis subsp. cre... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001P19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTAAAAGACACGATTTTATATCAATTAAGTAAAAC
TTGTCTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAAACCTC
CTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTGTGGCG
GAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAGCCTGA
GTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCACATCT
TGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTCATACT
TGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTAGCTTTCACCTTC
TCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGTGATGC
AGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTCATCTG
CATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGATGAACC
AGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCAAAAGT
TGCATTCTTGGCATCTTCAATACGGAGTTTACGGT
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