CN189514

Overview
NameCN189514
Unique NameCN189514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_THEEB (60 kDa chaperonin 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=groL2 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.797e-29
Identity = 68/131 (51.91%), Postives = 88/131 (67.18%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            RKLR+EDA NAT AA+ EGIVPGGG  L+HL+  + A+   L   +E+ GA IV  AL AP + IA NA           +A ++  G+NA T  YE+++ AG+IDPAKV R ALQNA S+AGMVLTT+A+
Sbjct:  390 RKLRLEDALNATKAAVAEGIVPGGGVTLLHLASRIDALLPSLSP-EEQTGARIVASALAAPVAQIADNAGAEGAVVVENVRAGDFNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSIAGMVLTTEAL 519          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_ANASL (60 kDa chaperonin 2 OS=Anabaena sp. (strain L31) GN=groL2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.797e-29
Identity = 70/131 (53.44%), Postives = 92/131 (70.23%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            RKLRIE+A NAT AA+ E I PGGG  L++L+  V  IK   E+ +E++GADIV++AL AP   IA NA           K S++  GYNA T ++E+++ AG+IDPAKV R ALQNAAS+AG+VLTT+AI
Sbjct:  390 RKLRIENALNATKAAVAESIGPGGGKTLIYLASKVDPIKAYFEE-EEKIGADIVKRALEAPLRQIADNAGEEGSVIVSRVKDSDFNVGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAI 519          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_PROM9 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=groL2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.182e-29
Identity = 68/131 (51.91%), Postives = 87/131 (66.41%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +KLR+EDA NAT AA+EEGIVPGGG  L HLS  +    DK  + +E +GA+IV+ +L AP   IA NA           K+  +  G+NA T +Y +M  AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLSPILKEWADKNLEGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKSKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_GEMAT (60 kDa chaperonin OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=groL PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28
Identity = 70/133 (52.63%), Postives = 96/133 (72.18%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXK-ASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +K R+EDA +AT AA+EEGIVPGGG AL+  + HV  +KD K+ + DE++G DIV++A+  P  +I  NA           + A E + GYNA+TD YE+++QAGVIDP KVTR ALQNAAS+AG++LTT+A+
Sbjct:  392 KKARVEDALHATRAAVEEGIVPGGGVALIR-AQHV--LKDVKVAERDEQIGVDIVRRAIEEPLRMIVQNAGGEGSIVVEKIRTAKETSFGYNALTDVYEDLVQAGVIDPTKVTRTALQNAASIAGLLLTTEAL 521          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_PROMS (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain AS9601) GN=groL2 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28
Identity = 68/131 (51.91%), Postives = 86/131 (65.65%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +KLR+EDA NAT AA+EEGIVPGGG  L HLS  +    DK  + +E +GA+IV+ +L AP   IA NA           K   +  G+NA T +Y +M  AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLSPILKEWADKNLEGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKTKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_PROM0 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9301) GN=groL2 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28
Identity = 68/131 (51.91%), Postives = 86/131 (65.65%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +KLR+EDA NAT AA+EEGIVPGGG  L HLS  +    DK  + +E +GA+IV+ +L AP   IA NA           K   +  G+NA T +Y +M  AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLSPILKEWADKNLEGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKTKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_SYNJB (60 kDa chaperonin 1 OS=Synechococcus sp. GN=groL1 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.396e-28
Identity = 70/131 (53.44%), Postives = 85/131 (64.89%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            RKLR+EDA NAT AA+EEGIVPGGG  L HL   V          DE +GA++V +AL AP   IA NA           K   + TGY+A  D + +M +AG++DPAKVTR ALQNAAS+AGMVLTT+AI
Sbjct:  390 RKLRLEDAINATKAAVEEGIVPGGGTTLAHLIPVVTEWAQANLSGDELVGANLVARALGAPLRRIAENAGQNGSIVLERVKDKPFNTGYDAQNDAFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTEAI 520          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_TRIEI (60 kDa chaperonin 2 OS=Trichodesmium erythraeum (strain IMS101) GN=groL2 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.823e-28
Identity = 66/131 (50.38%), Postives = 89/131 (67.94%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            RKLR+EDA NAT AA+EEGIVPGGG  L HL+  +    ++   ++E  G+ IV +AL+AP   IA NA           K  ++ TG+NA  +++ +M +AG++DPAKVTR ALQNAAS+AGMVLTT+ I
Sbjct:  390 RKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPELETWANENLQSEELTGSLIVSRALLAPLKRIAENAGQNGAVIGERVKEKDFNTGFNAANNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECI 520          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_PROM2 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9215) GN=groL2 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.381e-28
Identity = 68/131 (51.91%), Postives = 85/131 (64.89%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +KLR+EDA NAT AA+EEGIVPGGG  L HLS  +    DK    +E +GA+IV+ +L AP   IA NA           K   +  G+NA T +Y +M  AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLSPILKEWADKNLKGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKTKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_ALKOO (60 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groL PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.109e-28
Identity = 68/131 (51.91%), Postives = 91/131 (69.47%), Query Frame = -3
Query:  197 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 583
            RKLRIEDA NAT A +EEG+V GGGA+LVH+   +PA++  LE  + DER G  I+++AL  P   IA NA            +SE   G++A+T+KY NM++AG++DP KVTR ALQNAASV+ M+LTT+
Sbjct:  390 RKLRIEDALNATRAGVEEGMVAGGGASLVHV---IPAVEALLETTEGDERTGVKIIRRALEEPLRQIAANAGLEGSVIVEKVMSSEKGIGFDALTEKYVNMIEAGIVDPTKVTRSALQNAASVSAMLLTTE 517          
The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_THEEB4.797e-2951.9160 kDa chaperonin 2 OS=Thermosynechococcus elongat... [more]
CH602_ANASL4.797e-2953.4460 kDa chaperonin 2 OS=Anabaena sp. (strain L31) G... [more]
CH602_PROM98.182e-2951.9160 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH60_GEMAT1.069e-2852.6360 kDa chaperonin OS=Gemmatimonas aurantiaca (stra... [more]
CH602_PROMS1.069e-2851.9160 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROM01.069e-2851.9160 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH601_SYNJB1.396e-2853.4460 kDa chaperonin 1 OS=Synechococcus sp. GN=groL1 ... [more]
CH602_TRIEI1.823e-2850.3860 kDa chaperonin 2 OS=Trichodesmium erythraeum (s... [more]
CH602_PROM22.381e-2851.9160 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH60_ALKOO3.109e-2851.9160 kDa chaperonin OS=Alkaliphilus oremlandii (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001P19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTAAAAGACACGATTTTATATCAATTAAGTAAAAC
TTGTCTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAAACCTC
CTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTGTGGCG
GAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAGCCTGA
GTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCACATCT
TGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTCATACT
TGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTAGCTTTCACCTTC
TCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGTGATGC
AGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTCATCTG
CATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGATGAACC
AGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCAAAAGT
TGCATTCTTGGCATCTTCAATACGGAGTTTACGGT
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