CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_SYNJA (60 kDa chaperonin 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL2 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.109e-28 Identity = 70/131 (53.44%), Postives = 83/131 (63.36%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLR+EDA NAT AA+EEGIVPGGG L HL V DE +GA +V +AL AP IA NA K +T GY+A D Y +M +AG++DPAKVTR ALQNAAS+A MVLTT+AI Sbjct: 390 RKLRLEDAINATKAAVEEGIVPGGGTTLAHLMPAVTEWAQANLSGDELVGAMLVARALGAPLRRIAENAGQNGSIVLERVKEKPFTVGYDAQNDAYVDMFEAGIVDPAKVTRSALQNAASIASMVLTTEAI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_PROMA (60 kDa chaperonin 2 OS=Prochlorococcus marinus GN=groL2 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.061e-28 Identity = 67/131 (51.15%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIVPGGG L HL+ V + +E +GA+IV+ AL AP IA NA K+ GYNA + +Y +ML AG++DPAKVTR LQNA+S+AGMVLTT+ I Sbjct: 390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLASEVHSWAASSLSGEELIGANIVEAALTAPLMRIAENAGANGAVIAEHVKSKPLNDGYNAASGEYVDMLSAGIVDPAKVTRSGLQNASSIAGMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_PROM1 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain NATL1A) GN=groL2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.927e-28 Identity = 70/134 (52.24%), Postives = 88/134 (65.67%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE---DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIVPGGG L HL+ PA++D +E +GA+IV+ AL +P IA NA K+ GYNA T +Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLA---PALEDWSSTNLSGEELIGANIVEAALTSPLMRIAENAGANGAVVAENVKSKPVNDGYNAATGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 123.635 bits (309), Expect = 6.927e-28 Identity = 74/135 (54.81%), Postives = 90/135 (66.67%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD----KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLR+EDA NAT AA+EEGIVPGGG L HL+ P ++D L+D +E GA IV +AL AP IA NA K E+ GYNA + +Y +ML AG++DPAKVTR ALQNAAS+AGMVLTT+ I Sbjct: 390 RKLRLEDAINATKAAVEEGIVPGGGTTLAHLA---PQLEDWATGNLKD-EELTGALIVARALPAPLKRIAENAGQNGAVISERVKEKEFNVGYNAASLEYVDMLAAGIVDPAKVTRSALQNAASIAGMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LACAC (60 kDa chaperonin OS=Lactobacillus acidophilus GN=groL PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28 Identity = 71/132 (53.79%), Postives = 90/132 (68.18%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 R+ RIEDA N+T AA++EG V GGG ALV D AIKD K E +DE+ G +IV +AL AP IA NA ++ E GYNA TDK+ENM++AG+IDP KVTR ALQNAAS+A ++LTT+A+ Sbjct: 390 RRYRIEDALNSTRAAVDEGYVAGGGTALV---DVEKAIKDLKGETSDEQTGINIVLRALSAPVRQIAENAGKDGAVVLNKLESQENEIGYNAATDKWENMVEAGIIDPTKVTRTALQNAASIAALLLTTEAV 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_SYNPW (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH7803) GN=groL2 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28 Identity = 68/131 (51.91%), Postives = 82/131 (62.60%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIVPGGG L HL+ + +E +GA+IV AL AP IA NA KA + GYNA Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEQWAASTLSGEELIGANIVAAALTAPLMRIAENAGVNGAVVAENVKAKSFNEGYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_PROMP (60 kDa chaperonin 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL2 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28 Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIVPGGG L HL+ + DK +E +GA+IV+ +L +P IA NA K+ + G+NA T Y +M AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPILKEWADKALSGEELIGANIVEASLTSPLMRIAENAGSNGAVIAENVKSKPFNDGFNAATGDYVDMSAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_PROM5 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9515) GN=groL2 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.046e-28 Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIVPGGG L HL+ + D +E +GA+IV+ +L AP IA NA K+ + G+NA T +Y +M AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPILKEWADATLSGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKSKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_GALSU (60 kDa chaperonin, chloroplastic OS=Galdieria sulphuraria GN=groL PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.182e-27 Identity = 66/131 (50.38%), Postives = 89/131 (67.94%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AAIEEGIVPGGGA LVHL++ + + DE +GA IV+K++ AP I N K +++ GY+A T K+ NM ++G+IDPAKVTR ALQNA+S+AGM+LTT+ + Sbjct: 391 KKLRLEDAINATKAAIEEGIVPGGGATLVHLANDLFNWAKGVLKEDELIGALIVEKSITAPLKRIVQNEGKNGAIVVDEIKNLDFSIGYDASTSKFVNMYESGIIDPAKVTRSALQNASSIAGMILTTECL 521
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_EMIHU (60 kDa chaperonin, chloroplastic OS=Emiliania huxleyi GN=groL PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.182e-27 Identity = 68/131 (51.91%), Postives = 86/131 (65.65%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLR+EDA NAT AA+EEGIVPGGG L+H++ + + DE LG IV+KAL AP IA NA K S++ GYNA T++ +M +AG+IDPAKVTR LQNAAS+A M+LTT+ I Sbjct: 392 RKLRLEDAVNATKAAVEEGIVPGGGTTLIHIAAELLEWVKETLTGDELLGGLIVEKALQAPLKKIALNAGENGSIIVERIKESDFEIGYNAATNEIVDMYEAGIIDPAKVTRSTLQNAASIASMILTTECI 522 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |