CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_SALRD (60 kDa chaperonin 1 OS=Salinibacter ruber (strain DSM 13855) GN=groL1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.762e-23 Identity = 56/131 (42.75%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K +EDA +AT AA++EG++PGGG A + + + ++ +E+ D+ +G IV++AL AP IA N K E G+NA T++Y ++L GV+DP KVTR AL+NAASV GM+LTT+A+ Sbjct: 404 QKALVEDALSATRAAVDEGVLPGGGVAYLRALESIEEVE--VENEDQEIGVSIVREALEAPLRQIAENTGHEGSIVVQKVKDGEGDFGFNARTEEYGDLLDQGVLDPTKVTRSALENAASVGGMLLTTEAV 532
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_RHOPS (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB5) GN=groL1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.762e-23 Identity = 58/132 (43.94%), Postives = 88/132 (66.67%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASE-WTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK R++DA +AT AA+EEGIVPGGG AL+ S+ + IK ++ D++ G +IV+KAL APA IA NA + + G+++ T +Y ++++ G+IDP KV R A+QNAASVA +++TT+A+ Sbjct: 392 RKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRIKT--QNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKVLEKDQYNYGFDSQTGEYGDLVKKGIIDPTKVVRTAIQNAASVAALLITTEAM 521
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_KINRD (60 kDa chaperonin 1 OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=groL1 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.762e-23 Identity = 65/132 (49.24%), Postives = 82/132 (62.12%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKL-EDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K RIEDA +AT AAIEEGIV GGG+ALVH V ++D L DE G +V+KA P IA NA ++ E +G NA T +Y ++L AGV+DP KVTR AL+NAAS+A MVLTT + Sbjct: 390 KKHRIEDAVSATRAAIEEGIVAGGGSALVHA---VSVLEDNLGRTGDEATGVALVRKAASEPLRWIAENAGLEGYVVVEKVRSLEVGSGLNAATGEYVDLLAAGVLDPVKVTRSALRNAASIASMVLTTDTL 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_POLNS (60 kDa chaperonin OS=Polynucleobacter necessarius (strain STIR1) GN=groL PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.144e-22 Identity = 57/128 (44.53%), Postives = 80/128 (62.50%), Query Frame = -3 Query: 200 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTT 583 +K R++DA +AT AA+EEGI+PGGG AL+ + +K ++AD+ G IV +A+ P I NA +AS+ GYNA T +Y +++ GVIDP KVT+ AL NAASVAG++LTT Sbjct: 392 KKARVDDALHATRAAVEEGIIPGGGVALIRAMQGIKGLKG--DNADQDAGISIVLRAMQEPLRTIVSNAGEDAGVVVNAVQASKGNNGYNAATGEYGDLVAQGVIDPTKVTKAALVNAASVAGLLLTT 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_METBF (60 kDa chaperonin OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=groL PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.144e-22 Identity = 63/133 (47.37%), Postives = 83/133 (62.41%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K+RI+DA NAT AA+EEG+V GGG +L + AI D L+ + D +G IVQ+A+ P IA NA +A GYNA D +E++ +AGVIDP KV R LQNAAS+AGMVLTT+A+ Sbjct: 391 KKMRIDDALNATKAAVEEGVVIGGGISLFRAA----AILDSLKLEGDREIGVKIVQRAIEEPVRQIAENAGKEGAEVVATIRAEPRELFGYNAKKDVFEDLFEAGVIDPTKVVRSGLQNAASIAGMVLTTEAL 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LEGMI (60 kDa chaperonin OS=Legionella micdadei GN=groL PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.144e-22 Identity = 57/131 (43.51%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK R+EDA +AT AA+EEGIV GGG AL+ + +K E+AD+ +G +I+++A+ +P I NA S+ G+NA T +Y +M++ G++DP KVTR ALQNAASVA ++LTT+ + Sbjct: 389 RKARVEDALHATRAAVEEGIVAGGGVALIRAQKALDGLKG--ENADQDMGINILRRAIESPLRQIVANAGYEPSVIVNKVAESKDNFGFNAATGEYGDMVEMGILDPTKVTRTALQNAASVASLMLTTECM 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CHLPB (60 kDa chaperonin OS=Chlorobium phaeobacteroides (strain BS1) GN=groL PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.144e-22 Identity = 58/131 (44.27%), Postives = 86/131 (65.65%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPA-SLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R+EDA +AT AA++EGIV GGG AL+ + + ++ E+ D++ G +IV++AL P ++A+ K E G+NA T++YE M +AGV+DP KVTR AL+NAASVAG++LTT+A Sbjct: 392 KKARVEDALHATRAAVQEGIVAGGGVALIRAAKGLDNVQP--ENEDQKTGVEIVRRALEEPLRQIVANTGTTDGAVVVERVKQGEGDFGFNARTEEYEKMTEAGVVDPTKVTRTALENAASVAGILLTTEA 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH603_RHIL3 (60 kDa chaperonin 3 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=groL3 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.144e-22 Identity = 64/134 (47.76%), Postives = 92/134 (68.66%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA--DERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R++DA +AT AA+EEGI+PGGG AL+ V A+ D +E A D+R+G DIV++A+ APA IA NA + SE++ G+NA T +Y ++ GVIDPAKV R ALQ+AAS+AG+++TT+A+ Sbjct: 392 KKDRVDDALHATRAAVEEGILPGGGVALLRA---VKAL-DNVETANGDQRVGVDIVRRAVEAPARQIAENAGAEGSVIVGKLREKSEFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASIAGLLVTTEAM 521
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_BURTA (60 kDa chaperonin 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=groL2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.144e-22 Identity = 57/130 (43.85%), Postives = 81/130 (62.31%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R++DA +AT AA+EEGIVPGGG AL+ + + + + D++ G +IV +AL P I NA A GYNA T +Y +++++GV+DP KVTR ALQNAAS+AG++LTT A Sbjct: 392 KKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAELTGA--NVDQKAGINIVLRALEEPLRQIVANAGEEASVVVATVAAGSGNYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDA 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_BURS3 (60 kDa chaperonin 2 OS=Burkholderia sp. (strain 383) GN=groL2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.144e-22 Identity = 60/130 (46.15%), Postives = 78/130 (60.00%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R+EDA +AT AA+EEGIV GGG AL+ + A+ +AD+ G IV +A+ P I N A GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A Sbjct: 392 KKARVEDALHATRAAVEEGIVAGGGVALIRARTAIAALTGA--NADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGTGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDA 519 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |