CN189514

Overview
NameCN189514
Unique NameCN189514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_AMOA5 (60 kDa chaperonin OS=Amoebophilus asiaticus (strain 5a2) GN=groL PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22
Identity = 56/132 (42.42%), Postives = 87/132 (65.91%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +K R++DA +AT AA++EG+V GGG AL+     +PA+++ ++E+ D+  G +IV+ +L AP   I  NA           + ++   GYNA T  +EN+ +AGVIDP KVTR AL+NAAS+A ++LTT+ +
Sbjct:  391 KKDRVDDALHATRAAVQEGVVAGGGVALIRT---IPALENIEVENEDQATGINIVRTSLEAPLRTIVSNAGGEGAVIVQKIREAQGDFGYNARTGNFENLYEAGVIDPTKVTRLALENAASIASLLLTTECV 519          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH603_RHILO (60 kDa chaperonin 3 OS=Rhizobium loti GN=groL3 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22
Identity = 60/132 (45.45%), Postives = 86/132 (65.15%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +K R++DA NAT AA+EEGIVPGGG AL+  S  + A+     ++D+  G  IV++AL APA  IA NA             ++  T G+NA T +Y +M+  G++DP KV R ALQ+AASVAG+++TT+A+
Sbjct:  392 KKDRVDDALNATRAAVEEGIVPGGGVALLRASLSINAVG---ANSDQTAGISIVRRALQAPARQIAANAGAEASIVAGKILENKGATFGFNAQTGEYGDMIAMGIVDPVKVVRTALQDAASVAGLLVTTEAM 520          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH603_BURCH (60 kDa chaperonin 3 OS=Burkholderia cenocepacia (strain HI2424) GN=groL3 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22
Identity = 61/130 (46.92%), Postives = 81/130 (62.31%), Query Frame = -3
Query:  194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583
            +K R++DA +AT AA+EEGIVPGGG AL+     +  I+    +AD+  G  IV +AL AP  +IA NA              +   GYNA T +Y +++ AGV+DP KVTR ALQNAAS+A +VLTT A
Sbjct:  392 KKDRVDDALHATRAAVEEGIVPGGGVALLRARAALSDIRGA--NADQDAGIRIVLRALEAPLRVIAANAGDEPSVVISKVLEGKGNFGYNAATGEYGDLVDAGVVDPTKVTRTALQNAASIASLVLTTDA 519          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_RHOSH (60 kDa chaperonin 2 OS=Rhodobacter sphaeroides GN=groL2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22
Identity = 56/132 (42.42%), Postives = 85/132 (64.39%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            R+ R+ED  NAT AA++EG+VPGGGAAL+H    +  +K   ++ D+  G  I+++A+ AP   IA NA             ++  T G++A  + Y +MLQAG+IDP KV R AL++AAS+AG+++TT+ I
Sbjct:  391 RRDRVEDTLNATRAAVQEGVVPGGGAALIHAGKALAGLKG--DNPDQDAGIKIIRRAIQAPLRQIADNAGIDGSVVAGKVIENDSATFGFDAQLETYGDMLQAGIIDPTKVVRIALEDAASIAGLLITTEVI 520          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_RHOS4 (60 kDa chaperonin 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=groL2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22
Identity = 56/132 (42.42%), Postives = 85/132 (64.39%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            R+ R+ED  NAT AA++EG+VPGGGAAL+H    +  +K   ++ D+  G  I+++A+ AP   IA NA             ++  T G++A  + Y +MLQAG+IDP KV R AL++AAS+AG+++TT+ I
Sbjct:  392 RRDRVEDTLNATRAAVQEGVVPGGGAALIHAGKALAGLKG--DNPDQDAGIKIIRRAIQAPLRQIADNAGIDGSVVAGKVIENDSATFGFDAQLETYGDMLQAGIIDPTKVVRIALEDAASIAGLLITTEVI 521          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_RHOPA (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris GN=groL2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22
Identity = 57/132 (43.18%), Postives = 88/132 (66.67%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASE-WTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            RK R++DA +AT AA+EEGIVPGGG AL+  S+ +  +K K  + D++ G +IV++AL APA  IA NA              E +  G+++ + +Y ++++ G+IDP KV R A+QNAASVA +++TT+A+
Sbjct:  392 RKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKGLKTK--NDDQKTGVEIVRRALSAPARQIAINAGEDGSVIVGKVLEKEQYAFGFDSQSGEYGDLVKKGIIDPTKVVRTAIQNAASVAALLITTEAM 521          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22
Identity = 60/132 (45.45%), Postives = 89/132 (67.42%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +K R++DA +AT AA+EEGI+PGGG AL+     + +IK   +D  +R+G DIV++A+ AP   IA NA           +  S+++ G+NA T +Y ++   GVIDPAKV R ALQ+AASVAG+++TT+A+
Sbjct:  392 KKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDSIKTANDD--QRVGVDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASVAGLLVTTEAM 521          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_MOOTA (60 kDa chaperonin 2 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22
Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +K+RIEDA  AT AA+EEGIVPGGG ALV     +  ++ +    DE  G  +V +AL  P   IA NA           + S  + G+NA T +Y N+ +AG++DP KVTR AL+NAAS+A +VLTT+++
Sbjct:  390 KKMRIEDALAATRAAVEEGIVPGGGTALVRAQTALDGVQAQ---GDELTGVRLVYRALEEPMRQIAANAGVDGSVVVEKVRQSGDSMGFNAATREYVNLFEAGIVDPLKVTRSALENAASIASLVLTTESL 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_BURCM (60 kDa chaperonin 2 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22
Identity = 59/130 (45.38%), Postives = 80/130 (61.54%), Query Frame = -3
Query:  194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583
            +K R++DA +AT AA+EEGIVPGGG AL+ +   +  +K    +AD+  G  IV +AL  P   I  NA                  GYNA T +Y +++++GV+DP KVTR ALQNAASVAG++LTT A
Sbjct:  392 KKDRVDDALHATRAAVEEGIVPGGGVALIRVRQAIRELKGA--NADQDAGIKIVLRALEEPLRQIVTNAGEEASVVVAKVAEGSGNFGYNAQTGEYGDLVESGVLDPTKVTRTALQNAASVAGLLLTTDA 519          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_BURCA (60 kDa chaperonin 2 OS=Burkholderia cenocepacia (strain AU 1054) GN=groL2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22
Identity = 61/130 (46.92%), Postives = 81/130 (62.31%), Query Frame = -3
Query:  194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583
            +K R++DA +AT AA+EEGIVPGGG AL+     +  I+    +AD+  G  IV +AL AP  +IA NA              +   GYNA T +Y +++ AGV+DP KVTR ALQNAAS+A +VLTT A
Sbjct:  392 KKDRVDDALHATRAAVEEGIVPGGGVALLRARAALSDIRGA--NADQDAGIRIVLRALEAPLRVIAANAGDEPSVVISKVLEGKGNFGYNAATGEYGDLVDAGVVDPTKVTRTALQNAASIASLVLTTDA 519          
The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_AMOA51.495e-2242.4260 kDa chaperonin OS=Amoebophilus asiaticus (strai... [more]
CH603_RHILO1.495e-2245.4560 kDa chaperonin 3 OS=Rhizobium loti GN=groL3 PE=... [more]
CH603_BURCH1.495e-2246.9260 kDa chaperonin 3 OS=Burkholderia cenocepacia (s... [more]
CH602_RHOSH1.495e-2242.4260 kDa chaperonin 2 OS=Rhodobacter sphaeroides GN=... [more]
CH602_RHOS41.495e-2242.4260 kDa chaperonin 2 OS=Rhodobacter sphaeroides (st... [more]
CH602_RHOPA1.495e-2243.1860 kDa chaperonin 2 OS=Rhodopseudomonas palustris ... [more]
CH602_RHIEC1.495e-2245.4560 kDa chaperonin 2 OS=Rhizobium etli (strain CFN ... [more]
CH602_MOOTA1.495e-2245.0460 kDa chaperonin 2 OS=Moorella thermoacetica (str... [more]
CH602_BURCM1.495e-2245.3860 kDa chaperonin 2 OS=Burkholderia ambifaria (str... [more]
CH602_BURCA1.495e-2246.9260 kDa chaperonin 2 OS=Burkholderia cenocepacia (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001P19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTAAAAGACACGATTTTATATCAATTAAGTAAAAC
TTGTCTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAAACCTC
CTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTGTGGCG
GAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAGCCTGA
GTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCACATCT
TGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTCATACT
TGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTAGCTTTCACCTTC
TCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGTGATGC
AGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTCATCTG
CATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGATGAACC
AGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCAAAAGT
TGCATTCTTGGCATCTTCAATACGGAGTTTACGGT
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