CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_AMOA5 (60 kDa chaperonin OS=Amoebophilus asiaticus (strain 5a2) GN=groL PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 56/132 (42.42%), Postives = 87/132 (65.91%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R++DA +AT AA++EG+V GGG AL+ +PA+++ ++E+ D+ G +IV+ +L AP I NA + ++ GYNA T +EN+ +AGVIDP KVTR AL+NAAS+A ++LTT+ + Sbjct: 391 KKDRVDDALHATRAAVQEGVVAGGGVALIRT---IPALENIEVENEDQATGINIVRTSLEAPLRTIVSNAGGEGAVIVQKIREAQGDFGYNARTGNFENLYEAGVIDPTKVTRLALENAASIASLLLTTECV 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH603_RHILO (60 kDa chaperonin 3 OS=Rhizobium loti GN=groL3 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 60/132 (45.45%), Postives = 86/132 (65.15%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R++DA NAT AA+EEGIVPGGG AL+ S + A+ ++D+ G IV++AL APA IA NA ++ T G+NA T +Y +M+ G++DP KV R ALQ+AASVAG+++TT+A+ Sbjct: 392 KKDRVDDALNATRAAVEEGIVPGGGVALLRASLSINAVG---ANSDQTAGISIVRRALQAPARQIAANAGAEASIVAGKILENKGATFGFNAQTGEYGDMIAMGIVDPVKVVRTALQDAASVAGLLVTTEAM 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH603_BURCH (60 kDa chaperonin 3 OS=Burkholderia cenocepacia (strain HI2424) GN=groL3 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 61/130 (46.92%), Postives = 81/130 (62.31%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R++DA +AT AA+EEGIVPGGG AL+ + I+ +AD+ G IV +AL AP +IA NA + GYNA T +Y +++ AGV+DP KVTR ALQNAAS+A +VLTT A Sbjct: 392 KKDRVDDALHATRAAVEEGIVPGGGVALLRARAALSDIRGA--NADQDAGIRIVLRALEAPLRVIAANAGDEPSVVISKVLEGKGNFGYNAATGEYGDLVDAGVVDPTKVTRTALQNAASIASLVLTTDA 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_RHOSH (60 kDa chaperonin 2 OS=Rhodobacter sphaeroides GN=groL2 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 56/132 (42.42%), Postives = 85/132 (64.39%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 R+ R+ED NAT AA++EG+VPGGGAAL+H + +K ++ D+ G I+++A+ AP IA NA ++ T G++A + Y +MLQAG+IDP KV R AL++AAS+AG+++TT+ I Sbjct: 391 RRDRVEDTLNATRAAVQEGVVPGGGAALIHAGKALAGLKG--DNPDQDAGIKIIRRAIQAPLRQIADNAGIDGSVVAGKVIENDSATFGFDAQLETYGDMLQAGIIDPTKVVRIALEDAASIAGLLITTEVI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_RHOS4 (60 kDa chaperonin 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=groL2 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 56/132 (42.42%), Postives = 85/132 (64.39%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 R+ R+ED NAT AA++EG+VPGGGAAL+H + +K ++ D+ G I+++A+ AP IA NA ++ T G++A + Y +MLQAG+IDP KV R AL++AAS+AG+++TT+ I Sbjct: 392 RRDRVEDTLNATRAAVQEGVVPGGGAALIHAGKALAGLKG--DNPDQDAGIKIIRRAIQAPLRQIADNAGIDGSVVAGKVIENDSATFGFDAQLETYGDMLQAGIIDPTKVVRIALEDAASIAGLLITTEVI 521
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_RHOPA (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris GN=groL2 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 57/132 (43.18%), Postives = 88/132 (66.67%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASE-WTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK R++DA +AT AA+EEGIVPGGG AL+ S+ + +K K + D++ G +IV++AL APA IA NA E + G+++ + +Y ++++ G+IDP KV R A+QNAASVA +++TT+A+ Sbjct: 392 RKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKGLKTK--NDDQKTGVEIVRRALSAPARQIAINAGEDGSVIVGKVLEKEQYAFGFDSQSGEYGDLVKKGIIDPTKVVRTAIQNAASVAALLITTEAM 521
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 60/132 (45.45%), Postives = 89/132 (67.42%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R++DA +AT AA+EEGI+PGGG AL+ + +IK +D +R+G DIV++A+ AP IA NA + S+++ G+NA T +Y ++ GVIDPAKV R ALQ+AASVAG+++TT+A+ Sbjct: 392 KKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDSIKTANDD--QRVGVDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASVAGLLVTTEAM 521
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_MOOTA (60 kDa chaperonin 2 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL2 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K+RIEDA AT AA+EEGIVPGGG ALV + ++ + DE G +V +AL P IA NA + S + G+NA T +Y N+ +AG++DP KVTR AL+NAAS+A +VLTT+++ Sbjct: 390 KKMRIEDALAATRAAVEEGIVPGGGTALVRAQTALDGVQAQ---GDELTGVRLVYRALEEPMRQIAANAGVDGSVVVEKVRQSGDSMGFNAATREYVNLFEAGIVDPLKVTRSALENAASIASLVLTTESL 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_BURCM (60 kDa chaperonin 2 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL2 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 59/130 (45.38%), Postives = 80/130 (61.54%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R++DA +AT AA+EEGIVPGGG AL+ + + +K +AD+ G IV +AL P I NA GYNA T +Y +++++GV+DP KVTR ALQNAASVAG++LTT A Sbjct: 392 KKDRVDDALHATRAAVEEGIVPGGGVALIRVRQAIRELKGA--NADQDAGIKIVLRALEEPLRQIVTNAGEEASVVVAKVAEGSGNFGYNAQTGEYGDLVESGVLDPTKVTRTALQNAASVAGLLLTTDA 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_BURCA (60 kDa chaperonin 2 OS=Burkholderia cenocepacia (strain AU 1054) GN=groL2 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 61/130 (46.92%), Postives = 81/130 (62.31%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R++DA +AT AA+EEGIVPGGG AL+ + I+ +AD+ G IV +AL AP +IA NA + GYNA T +Y +++ AGV+DP KVTR ALQNAAS+A +VLTT A Sbjct: 392 KKDRVDDALHATRAAVEEGIVPGGGVALLRARAALSDIRGA--NADQDAGIRIVLRALEAPLRVIAANAGDEPSVVISKVLEGKGNFGYNAATGEYGDLVDAGVVDPTKVTRTALQNAASIASLVLTTDA 519 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |