CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_PROM1 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain NATL1A) GN=groL1 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22 Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA NAT AAIEEGIV GGG L+ LS+ + + KLE D++ G +I+++AL AP IA NA G+NA T +Y ++L+AG++D +KV R ALQ+A S+A +++TT+ + Sbjct: 390 RKLRIEDALNATRAAIEEGIVAGGGTTLLELSEGLGDLAKKLE-GDQKTGVEIIKRALTAPTKQIAINA--GFNGDVVVSDIKRLGKGFNAQTGEYVDLLEAGILDASKVIRLALQDAVSIASLLITTEVV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_PSEMY (60 kDa chaperonin OS=Pseudomonas mendocina (strain ymp) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA +AT AA+EEG+VPGGG ALV + +K ++ D+ +G ++++A+ AP I NA K G+NA TD Y +M++ G++DPAKVTR ALQ AAS+ G+++TT+A+ Sbjct: 392 KKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKG--DNEDQNVGIALLRRAVEAPLRQIVANAGGEPSVVVDKVKQGSGNFGFNAATDTYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAM 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_POLSQ (60 kDa chaperonin OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 58/128 (45.31%), Postives = 79/128 (61.72%), Query Frame = -3 Query: 200 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTT 583 +K R++DA +AT AA+EEGIVPGGG AL+ + +K ++AD+ G IV +A+ P I NA +AS GYNA T +Y +++ GVIDP KVT+ AL NAASVAG++LTT Sbjct: 392 KKARVDDALHATRAAVEEGIVPGGGVALIRAMQGIKGLKG--DNADQDAGISIVLRAMQEPLRTIVSNAGEDAGVVVNAVQASTGNNGYNAATGEYGDLVAQGVIDPTKVTKTALVNAASVAGLLLTT 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_PELCD (60 kDa chaperonin OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 58/130 (44.62%), Postives = 83/130 (63.85%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R+EDA +AT AA+EEGIVPGGG AL+ + AI+ ++ G +IV++A+ P I+ NA + T G+NA D+Y +M++AG+IDP KV R ALQNA+SVAG++LTT+A Sbjct: 392 KKARVEDALHATRAAVEEGIVPGGGVALIRC---IKAIESLDLPGEQNWGVNIVKRAMEEPLRQISANAGAEGSIVVNQVRGGADTYGFNAAADEYCDMIEAGIIDPTKVVRSALQNASSVAGLMLTTEA 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LEPBL (60 kDa chaperonin OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 57/129 (44.19%), Postives = 82/129 (63.57%), Query Frame = -3 Query: 197 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 583 +K R+EDA +AT AA+EEGIVPGGG L+ + V A+K + DE GA I+ ++L P +I +NA K + G+NA++ +E+++ AGV+DPAKV R ALQNAAS+ M+LTT+ Sbjct: 391 KKARVEDALSATRAAVEEGIVPGGGLTLLKAQEAVAALK---LEGDEATGAKIIFRSLEEPIRMITNNAGLEGSVIVEHAKTKKGNEGFNALSMVWEDLVSAGVVDPAKVVRSALQNAASIGSMILTTE 516
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LEPBJ (60 kDa chaperonin OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 57/129 (44.19%), Postives = 82/129 (63.57%), Query Frame = -3 Query: 197 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 583 +K R+EDA +AT AA+EEGIVPGGG L+ + V A+K + DE GA I+ ++L P +I +NA K + G+NA++ +E+++ AGV+DPAKV R ALQNAAS+ M+LTT+ Sbjct: 391 KKARVEDALSATRAAVEEGIVPGGGLTLLKAQEAVAALK---LEGDEATGAKIIFRSLEEPIRMITNNAGLEGSVIVEHAKTKKGNEGFNALSMVWEDLVSAGVVDPAKVVRSALQNAASIGSMILTTE 516
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_GEOSL (60 kDa chaperonin OS=Geobacter sulfurreducens GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 59/131 (45.04%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA +AT AA++EGIVPGGG A + + A+ E ++ G ++++++L P IA NA K S+ GYNA D+Y +ML AG+IDP KV+R ALQNAASVAG++LTT+A+ Sbjct: 392 KKARVEDALHATRAAVDEGIVPGGGVAYLRALASLDALSLPTE---QQFGVNVIKRSLEEPIRQIAQNAGVDGSIVVDKVKNSKDAFGYNAAEDEYVDMLAAGIIDPTKVSRSALQNAASVAGLMLTTEAM 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_FINM2 (60 kDa chaperonin OS=Finegoldia magna (strain ATCC 29328) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 62/130 (47.69%), Postives = 81/130 (62.31%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 RKLRIEDA AT AA+EEGIV GGG L+ + + V + D +E DE+ G I+ KAL P IA NA K + G++A +Y +ML+AG++DP KVT ALQNAASVA ++LTT+A Sbjct: 390 RKLRIEDALAATRAAVEEGIVAGGGTILLDIIEEVEKLVDDVE-GDEKTGVKIILKALEEPVKQIAINAGIDGSVIVENVKNKDKGIGFDAYKGEYVDMLKAGIVDPTKVTLSALQNAASVASLLLTTEA 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_DESVM (60 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 58/129 (44.96%), Postives = 84/129 (65.12%), Query Frame = -3 Query: 197 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 583 +K R+EDA NAT AA+EEGIVPGGG A + +S + +K D DE G +I+++A+ P I+ NA + + G+NA + ++E++++AGVIDP KVTR ALQNAASVA ++LTT+ Sbjct: 392 KKDRVEDALNATRAAVEEGIVPGGGTAYIRISRVLDDVKPA--DDDEAAGVNIIRRAIEEPLRQISSNAGYEGSIVVEKVRDGKDGFGFNAASGEFEDLIKAGVIDPKKVTRIALQNAASVASLLLTTE 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_DESDG (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 61/129 (47.29%), Postives = 81/129 (62.79%), Query Frame = -3 Query: 197 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 583 +K R+EDA NAT AA+EEGIVPGGG ALV + +K D DE G I+++A+ P IA NA K + G+NA T ++E+++ AGVIDP KV+R ALQNAASVA ++LTT+ Sbjct: 392 KKDRVEDALNATRAAVEEGIVPGGGTALVRCCKVLDDVKPA--DDDEAAGVTIIRRAIEEPLRQIAANAGFEGSIICEKVKEGKDAFGFNAATGEFEDLIAAGVIDPKKVSRIALQNAASVASLLLTTE 518 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |