CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CYTH3 (60 kDa chaperonin OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 57/131 (43.51%), Postives = 80/131 (61.07%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R++DA +AT AA+EEGIVPGGG AL+ + + + DE+ G I++ A+ +P I +NA K GYNA D+YE M+ AG+IDP KVTR AL+NAASVA ++LTT+ + Sbjct: 391 KKDRVDDALHATRAAVEEGIVPGGGVALIRAGAALDNVA--FHNEDEKTGIQIIRTAIESPLRAIVYNAGLEGSVIVQKVKEGTGDYGYNAREDRYEAMIAAGIIDPTKVTRLALENAASVASLLLTTECV 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BURVI (60 kDa chaperonin OS=Burkholderia vietnamiensis GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 59/130 (45.38%), Postives = 78/130 (60.00%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R+EDA +AT AA+EEGIV GGG AL+ + + +AD+ G IV +A+ P I N A + GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A Sbjct: 392 KKARVEDALHATRAAVEEGIVAGGGVALIRARTAIAGLTGA--NADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDA 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BURPP (60 kDa chaperonin OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 59/130 (45.38%), Postives = 78/130 (60.00%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R+EDA +AT AA+EEGIV GGG AL+ + +K +AD+ G IV +A+ P I N A + GYNA T +Y +++ AGV+DP KVTR ALQNAASVAG++LTT A Sbjct: 392 KKARVEDALHATRAAVEEGIVAGGGVALIRARTAIAGLKGA--NADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGQGNYGYNAATGEYVDLVDAGVVDPTKVTRTALQNAASVAGLLLTTDA 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BURP8 (60 kDa chaperonin OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 58/130 (44.62%), Postives = 78/130 (60.00%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R+EDA +AT AA+EEGIV GGG AL+ + +K ++AD+ G IV +A+ P I N GYNA T +Y ++++AGV+DP KVTR ALQNAASVAG++LTT A Sbjct: 392 KKARVEDALHATRAAVEEGIVAGGGVALIRARSAISGVKG--DNADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAGGTGNYGYNAATGEYGDLVEAGVVDPTKVTRTALQNAASVAGLLLTTDA 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BURCE (60 kDa chaperonin OS=Burkholderia cepacia GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 59/130 (45.38%), Postives = 78/130 (60.00%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R+EDA +AT AA+EEGIV GGG AL+ + + +AD+ G IV +A+ P I N A + GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A Sbjct: 392 KKARVEDALHATRAAVEEGIVAGGGVALIRARTAIAGLTGA--NADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDA 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BORGA (60 kDa chaperonin OS=Borrelia garinii GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 55/129 (42.64%), Postives = 85/129 (65.89%), Query Frame = -3 Query: 197 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 583 +K R+EDA +AT AA+EEG+VPGGG+ L+ ++ ++ I +E+ G +IV+++L P I NA K + G++A + K+ NM+++G+IDPAKVTR ALQNAAS+AG++LTT+ Sbjct: 390 KKHRVEDALSATRAAVEEGVVPGGGSTLIEVAMYLDTIDTSKLSYEEKQGFEIVKRSLEEPMRQIISNAGFEGSIYIHQIKTEKKGLGFDASSFKWVNMIESGIIDPAKVTRSALQNAASIAGLLLTTE 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BORBZ (60 kDa chaperonin OS=Borrelia burgdorferi (strain ZS7) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 55/129 (42.64%), Postives = 85/129 (65.89%), Query Frame = -3 Query: 197 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 583 +K R+EDA +AT AA+EEG+VPGGG+ L+ ++ ++ I +E+ G +IV+++L P I NA K + G++A + K+ NM+++G+IDPAKVTR ALQNAAS+AG++LTT+ Sbjct: 390 KKHRVEDALSATRAAVEEGVVPGGGSTLIEVAMYLDTIDTSKLSYEEKQGFEIVKRSLEEPMRQIISNAGFEGSIYIHQIKTEKKGLGFDASSFKWVNMIESGIIDPAKVTRSALQNAASIAGLLLTTE 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BORBU (60 kDa chaperonin OS=Borrelia burgdorferi GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 55/129 (42.64%), Postives = 85/129 (65.89%), Query Frame = -3 Query: 197 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 583 +K R+EDA +AT AA+EEG+VPGGG+ L+ ++ ++ I +E+ G +IV+++L P I NA K + G++A + K+ NM+++G+IDPAKVTR ALQNAAS+AG++LTT+ Sbjct: 390 KKHRVEDALSATRAAVEEGVVPGGGSTLIEVAMYLDTIDTSKLSYEEKQGFEIVKRSLEEPMRQIISNAGFEGSIYIHQIKTEKKGLGFDASSFKWVNMIESGIIDPAKVTRSALQNAASIAGLLLTTE 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BORAP (60 kDa chaperonin OS=Borrelia afzelii (strain PKo) GN=groL PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 55/129 (42.64%), Postives = 85/129 (65.89%), Query Frame = -3 Query: 197 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 583 +K R+EDA +AT AA+EEG+VPGGG+ L+ ++ ++ I +E+ G +IV+++L P I NA K + G++A + K+ NM+++G+IDPAKVTR ALQNAAS+AG++LTT+ Sbjct: 390 KKHRVEDALSATRAAVEEGVVPGGGSTLIEVAMYLDTIDTSKLSYEEKQGFEIVKRSLEEPMRQIISNAGFEGSIYIHQIKTEKKGLGFDASSFKWVNMIESGIIDPAKVTRSALQNAASIAGLLLTTE 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH605_RHILO (60 kDa chaperonin 5 OS=Rhizobium loti GN=groL5 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.952e-22 Identity = 60/132 (45.45%), Postives = 85/132 (64.39%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R++DA NAT AA+EEGIVPGGG AL+ S + A+ ++D+ G IV++AL APA IA NA ++ T GYNA T +Y +M+ G++DP KV R ALQ+AASVAG+++T +A+ Sbjct: 392 KKDRVDDALNATRAAVEEGIVPGGGVALLRASLSINAVG---ANSDQTAGISIVRRALQAPARQIAANAGAEASIVAGKILENKGATYGYNAQTGEYGDMIAMGIVDPVKVVRTALQDAASVAGLLVTAEAM 520 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |