CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_THISH (60 kDa chaperonin OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=groL PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 55/131 (41.98%), Postives = 80/131 (61.07%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA +AT AA+EEG+VPGGG ALV + ++K D D +G I ++A+ P I N + GYNA T +Y +M++ G++DP KVTR ALQNAASV+G+++TT+A+ Sbjct: 392 KKARVEDALHATRAAVEEGVVPGGGVALVRALQALKSLKGANHDQD--IGIAIARRAMEEPLRQIVSNCGEEPSVVLNNVVEGKGNYGYNAATGEYGDMIEMGILDPTKVTRSALQNAASVSGLIITTEAM 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_SULNB (60 kDa chaperonin OS=Sulfurovum sp. (strain NBC37-1) GN=groL PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 65/131 (49.62%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R++DA +AT AA++EGIV GGGAAL S A+K LE DE +GA+I+ +A+ AP IA NA SE G+NA T +Y NML+AG+IDP KV R ALQNA SVA ++LTT+A Sbjct: 391 KKDRVDDALSATKAAVDEGIVIGGGAALAKASK---AVKLDLEH-DEAVGAEIILRAVYAPMKQIAQNAGFDAGVVADKIANNSEANLGFNAATGEYVNMLEAGIIDPLKVARVALQNATSVASLLLTTEA 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LEPCP (60 kDa chaperonin OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=groL PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA +AT AA+EEGIV GGG AL+ IK ++AD+ G +V KA+ AP I +NA A G+NA D Y +M++ G++DP KVTR ALQNAASVA ++LTT+ + Sbjct: 392 KKARVEDALHATRAAVEEGIVAGGGVALLRAKQAAGEIKG--DNADQDAGIKLVLKAIEAPLREIVYNAGGEASVVVNAVLAGSGNYGFNAANDTYGDMIEMGILDPTKVTRTALQNAASVASLMLTTECM 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LAWIP (60 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groL PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 61/129 (47.29%), Postives = 83/129 (64.34%), Query Frame = -3 Query: 197 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 583 +K R+EDA NAT AA+EEGIVPGGG A V + IK D DE G +I++++L P IA NA + ++ G+NA + +YE++++AGVIDP KVTR ALQNAASVA ++LTT+ Sbjct: 392 KKDRVEDALNATRAAVEEGIVPGGGTAFVRSIKVLDDIKPA--DDDELAGLNIIRRSLEEPLRQIAANAGYEGSIVVEKVREAKDGFGFNAASGEYEDLIKAGVIDPKKVTRIALQNAASVASLLLTTE 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_JANMA (60 kDa chaperonin OS=Janthinobacterium sp. (strain Marseille) GN=groL PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 59/131 (45.04%), Postives = 79/131 (60.31%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA +AT AA+EEGIVPGGG AL+ AIK K ++ D+ G IV +A+ P +I NA + GYNA Y +M++ GV+DPAKVTR ALQNAAS+A ++LTT + Sbjct: 392 KKARVEDALHATRAAVEEGIVPGGGVALLRAR---AAIKIKGDNPDQEAGIRIVLRAMEEPLRMIVQNAGEEASVVVAKVLEGKGNFGYNAANGTYGDMVEMGVLDPAKVTRSALQNAASIAALLLTTDCM 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_GLUOX (60 kDa chaperonin OS=Gluconobacter oxydans GN=groL PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 58/132 (43.94%), Postives = 86/132 (65.15%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASE-WTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK R++DA +AT AA+EEGIVPGGG AL S + + ++ D+R+G +IV+KAL AP IA NA +E + G++A +Y++++ AG+IDP KV R ALQ+AASV G+++TT+A+ Sbjct: 392 RKDRVDDALHATRAAVEEGIVPGGGTALARASSALKGLT--FDNDDQRVGGEIVRKALQAPLRQIAFNAGEDGAVIAGKVLENEGYVFGFDAQKGEYKDLVAAGIIDPTKVVRTALQDAASVGGLLITTEAM 521
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_ERWT9 (60 kDa chaperonin OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=groL PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 56/131 (42.75%), Postives = 83/131 (63.36%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA +AT AA+EEG+V GGG ALV ++ + ++ + ED + +G + +A+ +P I NA KA E GYNA T++Y NM+ G++DP KVTR ALQ AASVAG+++TT+ + Sbjct: 392 KKARVEDALHATRAAVEEGVVAGGGVALVRVAAMLTELRGQNED--QNVGIKVALRAMESPLRQIVSNAGEEPSVVTNAVKAGEGNYGYNAQTEEYGNMIDFGILDPTKVTRSALQYAASVAGLMITTECM 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_ENTFA (60 kDa chaperonin OS=Enterococcus faecalis GN=groL PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 61/130 (46.92%), Postives = 82/130 (63.08%), Query Frame = -3 Query: 191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580 KLRIEDA NAT AA+EEG+V GGG ALV++ V A++ + D G IV +AL P IA NA K + G+NA ++ NM++AG++DP KVTR ALQNAASV+ ++LTT+A+ Sbjct: 391 KLRIEDALNATRAAVEEGMVSGGGTALVNVIGKVAALE---AEGDVATGIKIVVRALEEPIRQIAENAGYEGSVIVDKLKNVDLGIGFNAANGEWVNMVEAGIVDPTKVTRSALQNAASVSALLLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CLOB8 (60 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=groL PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 62/130 (47.69%), Postives = 82/130 (63.08%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +KLRIEDA AT AA+EEGIV GGG A V++ + V + + AD ++G +I+ K+L P IA NA K SE GY+A+ +Y NM++ G++DP KVTR ALQNAASVA LTT+A Sbjct: 390 KKLRIEDALAATKAAVEEGIVAGGGTAYVNVINEVAKLTSDV--ADTQIGINIIVKSLEEPVRQIATNAGVEGSVIIEKVKNSEPGIGYDALHGEYINMIKGGIVDPTKVTRSALQNAASVASTFLTTEA 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CHRSD (60 kDa chaperonin OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=groL PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 58/131 (44.27%), Postives = 83/131 (63.36%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA ++T AA+EEG+VPGGG ALV + + + +K ++ D+ G I +A+ AP I NA KA E GYNA T +Y ++ GV+DPAKVTR ALQ+A SVAG+++TT+A+ Sbjct: 392 KKARVEDALHSTRAAVEEGVVPGGGTALVRILNKLVDLKG--DNEDQTHGIAIALRAMEAPLRQIVTNAGQEASVIVNQVKAGEGNYGYNAQTGEYGDLFDMGVLDPAKVTRSALQSAGSVAGLMITTEAM 520 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |