CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CAMHC (60 kDa chaperonin OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=groL PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 62/131 (47.33%), Postives = 86/131 (65.65%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKAS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R++DA +AT AA+EEGIV GGGAAL+ + A+K+ L+ DE++GADIV++AL AP IA NA + E G++A ++ NM +AG+IDP KV R ALQNA SVA ++LTT+A Sbjct: 391 KKDRVDDALSATKAAVEEGIVIGGGAALIKAGN---AVKENLK-GDEKIGADIVKRALFAPLRQIAENAGFDAGVIANAVSINKEKAYGFDAACGEFVNMFEAGIIDPVKVERVALQNAVSVASLLLTTEA 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BUCCC (60 kDa chaperonin OS=Buchnera aphidicola subsp. Cinara cedri GN=groL PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 56/131 (42.75%), Postives = 82/131 (62.60%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA +AT AA+EEG+VPGGG ALV +++ + I + ED + +G + +A+ AP I N+ K GYNA TD+Y +M+ G++DP KVTR ALQ AASVAG+++TT+ + Sbjct: 392 KKARVEDALHATRAAVEEGVVPGGGVALVRVAEKISRINGQNED--QNVGIRVALRAMEAPLRQIVANSGEEPSVVTNNVKDGHGNYGYNAATDEYGDMISFGILDPTKVTRSALQYAASVAGLMITTECM 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BIFAA (60 kDa chaperonin OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=groL PE=3 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 63/131 (48.09%), Postives = 80/131 (61.07%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK RIEDA AAIEEG++PGGG AL+ + A D + DE GA IV +A+ AP IA NA ++ G NA T++YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+ Sbjct: 390 RKHRIEDAVRNAKAAIEEGLLPGGGVALIQAA--AKAKDDVKLEGDEATGAAIVFRAVEAPIKQIAENAGLSGDVVIDKVRSLPDGQGLNAATNEYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAV 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_MYXXD (60 kDa chaperonin 2 OS=Myxococcus xanthus (strain DK 1622) GN=groL2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 59/131 (45.04%), Postives = 80/131 (61.07%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA NAT AA+EEG+VPGGG A + + A+ E+ G DI+++A+ P I N K S G+NA T YE++L AGVIDPAKV+R ALQNAASV+ ++LTT+A+ Sbjct: 391 KKARVEDALNATRAAVEEGVVPGGGVAYIRC---LKALDGLQLSGGEKFGVDIIRRAVEEPLRQIVGNGGLEGSVVVNKVKESSGPFGFNAATGTYEDLLAAGVIDPAKVSRTALQNAASVSSLMLTTEAM 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_THEFY (60 kDa chaperonin 1 OS=Thermobifida fusca (strain YX) GN=groL1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 65/132 (49.24%), Postives = 83/132 (62.88%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK RIEDA AA+EEGI+PGGG AL+ S A +KLE + DE +GA IV++A+ P IA NA K+ E G NA T +Y ++ + GVIDP KVTR ALQNAAS+AG+ LTT+A+ Sbjct: 391 RKHRIEDAVRNAKAAVEEGILPGGGVALLQASI---AAFEKLELEGDEAIGASIVRRAVEEPLKQIAINAGYEGGVVVEKVKSLEPGIGLNAATGEYTDLFKDGVIDPTKVTRSALQNAASIAGLFLTTEAV 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_STRAL (60 kDa chaperonin 1 OS=Streptomyces albus G GN=groL1 PE=1 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 61/132 (46.21%), Postives = 82/132 (62.12%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKL-EDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK R+EDA +AT AA+EEGIV GGG+ALVH V + D L DE G +V++A V P IA NA + G+NA T +Y ++++AGVIDP KVTR AL+NAAS+A ++LTT+ + Sbjct: 392 RKHRLEDAISATRAAVEEGIVSGGGSALVHA---VKVLDDNLGRTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITTKVAELDKGQGFNAATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETL 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_MYCSS (60 kDa chaperonin 1 OS=Mycobacterium sp. (strain MCS) GN=groL1 PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 63/131 (48.09%), Postives = 80/131 (61.07%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK RIEDA AA+EEGIV GGG AL+ + P++++ DE GA+IV+ AL AP IA N + S TG NA T +YE++L AGV DP KVTR ALQNAAS+A + LTT+A+ Sbjct: 390 RKHRIEDAVRNAKAAVEEGIVAGGGVALLQAA---PSLEELNLTGDEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSAAGTGLNAATGEYEDLLAAGVADPVKVTRSALQNAASIAALFLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_MYCSK (60 kDa chaperonin 1 OS=Mycobacterium sp. (strain KMS) GN=groL1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 63/131 (48.09%), Postives = 80/131 (61.07%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK RIEDA AA+EEGIV GGG AL+ + P++++ DE GA+IV+ AL AP IA N + S TG NA T +YE++L AGV DP KVTR ALQNAAS+A + LTT+A+ Sbjct: 390 RKHRIEDAVRNAKAAVEEGIVAGGGVALLQAA---PSLEELNLTGDEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSAAGTGLNAATGEYEDLLAAGVADPVKVTRSALQNAASIAALFLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_MYCSJ (60 kDa chaperonin 1 OS=Mycobacterium sp. (strain JLS) GN=groL1 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 63/131 (48.09%), Postives = 80/131 (61.07%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK RIEDA AA+EEGIV GGG AL+ + P++++ DE GA+IV+ AL AP IA N + S TG NA T +YE++L AGV DP KVTR ALQNAAS+A + LTT+A+ Sbjct: 390 RKHRIEDAVRNAKAAVEEGIVAGGGVALLQAA---PSLEELNLTGDEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSAAGTGLNAATGEYEDLLAAGVADPVKVTRSALQNAASIAALFLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_UNCTG (60 kDa chaperonin OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=groL PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22 Identity = 60/132 (45.45%), Postives = 83/132 (62.88%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K ++EDA NAT A +EEGIV GGG AL L K D+DE+ G +IV KAL P +I NA K S+ T GY+A ++Y +M++AG++DPAKVTR AL+NAAS+A ++LTT+ + Sbjct: 390 KKFKVEDALNATRAGVEEGIVAGGGVAL--LKTQTVLEKINAADSDEKTGIEIVLKALEGPIRMIIENAGLEASVVVDKVKNSKDTAFGYDADNNEYVDMIKAGIVDPAKVTRTALENAASIASLILTTETL 519 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |