CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BAUCH (60 kDa chaperonin OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=groL PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22 Identity = 53/131 (40.46%), Postives = 83/131 (63.36%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA ++T AA+EEG+V GGG AL+ ++ + + ++ D+ +G + ++A+ AP I NA KA + GYNA T+KY NM+ G++DP KVTR ALQ AAS+AG+++TT+ + Sbjct: 392 KKARVEDALHSTRAAVEEGVVAGGGVALIRAANGIQQLCG--DNEDQNVGIKVARRAMEAPLRQIVANAGEEPSVIANNVKAEDGNMGYNAATEKYGNMIDMGILDPTKVTRSALQYAASIAGLMITTECM 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_ACIF5 (60 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=groL PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22 Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA +AT AA+EEGIVPGGG ALV + K D D +G I+++A+ P I NA + GYNA TD+Y +M + GVIDP KVTR ALQ A+S+AG+++TT+A+ Sbjct: 392 KKARVEDALHATRAAVEEGIVPGGGVALVRARHALEGFKTANHDQD--MGVAIIRRAIEEPLRQIVANAGGEGSVVLNKVVDGKDGYGYNAATDEYGDMFEMGVIDPTKVTRTALQKASSIAGLMITTEAM 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_ACIF2 (60 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=groL PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22 Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA +AT AA+EEGIVPGGG ALV + K D D +G I+++A+ P I NA + GYNA TD+Y +M + GVIDP KVTR ALQ A+S+AG+++TT+A+ Sbjct: 392 KKARVEDALHATRAAVEEGIVPGGGVALVRARHALEGFKTANHDQD--MGVAIIRRAIEEPLRQIVANAGGEGSVVLNKVVDGKDGYGYNAATDEYGDMFEMGVIDPTKVTRTALQKASSIAGLMITTEAM 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH605_RHIME (60 kDa chaperonin 5 OS=Rhizobium meliloti GN=groL5 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22 Identity = 58/132 (43.94%), Postives = 89/132 (67.42%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKA-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R++DA +AT AA+EEGI+PGGG AL+ + +K + D+R+G D+V++A+ AP IA NA + +E++ G+NA T++Y ++ GVIDPAKV R ALQ+AASVAG+++TT+A+ Sbjct: 392 KKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDGLKTA--NNDQRVGVDLVRRAIEAPVRQIAENAGAEGSIIVGKLREKTEFSYGWNAQTNEYGDLYAMGVIDPAKVVRTALQDAASVAGLLVTTEAM 521
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH605_BURXL (60 kDa chaperonin 5 OS=Burkholderia xenovorans (strain LB400) GN=groL5 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22 Identity = 58/130 (44.62%), Postives = 80/130 (61.54%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +K R++DA +AT AA+EEGIVPGGG AL+ + + + +K +AD+ G IV +AL P I NA GYNA T +Y +++++GV+DP KVTR ALQNAASVA ++LTT A Sbjct: 392 KKDRVDDALHATRAAVEEGIVPGGGVALIRVRNAISGLKGA--NADQDAGIKIVLRALEEPLRQIVTNAGEEASVVVAKVAEGSGNFGYNAQTGEYGDLVESGVLDPTKVTRTALQNAASVAALLLTTDA 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_RHOPS (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisB5) GN=groL2 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22 Identity = 61/132 (46.21%), Postives = 86/132 (65.15%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA NAT AA++EGIVPGGG AL+ V I + ++AD + G +IV KAL AP IA NA ++ T G++A T++Y +ML G++DPAKV R ALQ+AASVA +++TT+A+ Sbjct: 392 KKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRINN--DNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDAASVAALLVTTEAM 521
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_RHOP5 (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisA53) GN=groL2 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22 Identity = 57/132 (43.18%), Postives = 86/132 (65.15%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASE-WTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK R++DA +AT AA+EEGIVPGGG AL+ S+ + +K K +D ++ G +IV+KAL PA IA NA + + G+++ + +Y N++ G+IDP KV R A+QNAASVA +++TT+A+ Sbjct: 392 RKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKGLKTKNDD--QKTGVEIVRKALSWPARQIAINAGEDGSVIVGKILEKDQYNYGFDSQSGEYGNLVSKGIIDPTKVVRTAIQNAASVAALLITTEAM 521
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_PROM9 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9312) GN=groL1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22 Identity = 58/129 (44.96%), Postives = 81/129 (62.79%), Query Frame = -3 Query: 197 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 583 +KLRIED+ NAT AAIEEG+V GGG L+ +SD + + K D D R G +IV++AL+ P IA NA G+NA + KYEN+ ++G++DP KV R ALQ++ S+A M+LTT+ Sbjct: 390 KKLRIEDSLNATKAAIEEGVVSGGGQTLIEISDELLNLSQKSSD-DLRTGINIVKEALLEPTKQIAKNAGFNGDVVVAEI--KRLNKGFNANSGKYENLKESGILDPTKVIRLALQDSVSIAAMLLTTE 515
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_MYXXD (60 kDa chaperonin 1 OS=Myxococcus xanthus (strain DK 1622) GN=groL1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22 Identity = 59/131 (45.04%), Postives = 81/131 (61.83%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA +AT AA+EEGIVPGGG A + +PA++ ++ G I+++AL P IA NA + GYNA T+ YE++ +AGVIDP KV R ALQNAASVA ++LTT+A+ Sbjct: 392 KKARVEDALHATRAAVEEGIVPGGGVAYLRA---LPALEKLKPGGEQDFGVAIIRRALQEPLRKIASNAGVEGAVVINKVREGTGAFGYNARTEVYEDLEKAGVIDPTKVERTALQNAASVASLLLTTEAM 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_ACIC1 (60 kDa chaperonin 1 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=groL1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22 Identity = 65/132 (49.24%), Postives = 82/132 (62.12%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK RIEDA AA+EEGIV GGG AL+ +KL+ + DE GA IV+ AL AP IA NA ++ E G NA T +Y +M++AG+IDPAKVTR ALQNAAS+AG+ LTT+A+ Sbjct: 390 RKHRIEDAVRNAKAAVEEGIVAGGGVALLQAGK---TAFEKLDLEGDEATGARIVELALEAPLKQIAINAGLEGGVVVEKVRSLEPGWGLNAQTGEYVDMIKAGIIDPAKVTRSALQNAASIAGLFLTTEAV 518 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |