CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: RUBB_SECCE (RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) OS=Secale cereale GN=CPN60 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.438e-27 Identity = 64/132 (48.48%), Postives = 90/132 (68.18%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASE-WTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIV GGG L+ L+ V AIKD LE+ ++++GA+IV++AL P LIA NA +++ + GYNA T +YE+++ AG+IDP KV RC L++AASVA LT+ + Sbjct: 345 KKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRRALCYPLKLIAKNAGVNGSVVTEKVLSNDNFKFGYNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVV 476
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BACSK (60 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groL PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.438e-27 Identity = 69/131 (52.67%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA N+T AA+EEGIV GGG ALV++ + A+K DE G +IV +AL P IAHNA KA E GYNA T +Y NM++ G++DP KVTR ALQNAASV+ M LTT+A+ Sbjct: 390 RKLRIEDALNSTRAAVEEGIVAGGGTALVNV---IKAVKAVDATGDEATGVNIVLRALEEPVRQIAHNAGLEGSIIVEKLKAEEVGVGYNAATGEYVNMVETGILDPVKVTRSALQNAASVSAMFLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_CHLCV (60 kDa chaperonin 1 OS=Chlamydophila caviae GN=groL1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.438e-27 Identity = 63/131 (48.09%), Postives = 89/131 (67.94%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R++DA++AT AA+EEGI+PGGG ALV + A L + DE++GA IV KAL AP IA NA + + GY+A+ D Y +M++AG++DP KVTRCAL++AASVAG++LTT+A+ Sbjct: 392 KKDRVDDAQHATLAAVEEGILPGGGTALVRCIPTLEAFIPILTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIICQQVLSRSSSEGYDALRDAYTDMIEAGILDPTKVTRCALESAASVAGLLLTTEAL 522
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_PHATR (60 kDa chaperonin, chloroplastic OS=Phaeodactylum tricornutum GN=groL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.490e-27 Identity = 66/132 (50.00%), Postives = 88/132 (66.67%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDH-VPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIVPGGGA L HLS++ V K+ L++ DE +GA I+ +A++AP IA NA + E+ GYNA + + NM G++DPAKVTR LQNA S+A M+LTT+ I Sbjct: 392 KKLRLEDAINATRAAVEEGIVPGGGATLTHLSENLVTWAKNNLKE-DELIGAMIISRAILAPLRRIAENAGINGPVIIEKVQQQEFEIGYNAAKNTFGNMYTEGIVDPAKVTRSGLQNATSIASMILTTECI 522
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LACHE (60 kDa chaperonin OS=Lactobacillus helveticus GN=groL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.490e-27 Identity = 67/131 (51.15%), Postives = 86/131 (65.65%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 R+ RIEDA N+T AA++EG V GGG ALV++ V +K E DE+ G +IV +AL AP IA NA + E GYNA TDK+ENM+ AG+IDP KVTR ALQNAAS+A ++LTT+A+ Sbjct: 390 RRYRIEDALNSTRAAVDEGYVAGGGTALVNVEKAVREVKG--ETTDEQTGINIVLRALSAPVRQIAENAGKDGSVILDKLEHQENEIGYNAATDKWENMVDAGIIDPTKVTRTALQNAASIAALLLTTEAV 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LACH4 (60 kDa chaperonin OS=Lactobacillus helveticus (strain DPC 4571) GN=groL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.490e-27 Identity = 67/131 (51.15%), Postives = 86/131 (65.65%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 R+ RIEDA N+T AA++EG V GGG ALV++ V +K E DE+ G +IV +AL AP IA NA + E GYNA TDK+ENM+ AG+IDP KVTR ALQNAAS+A ++LTT+A+ Sbjct: 390 RRYRIEDALNSTRAAVDEGYVAGGGTALVNVEKAVREVKG--ETTDEQTGINIVLRALSAPVRQIAENAGKDGSVILDKLEHQENEIGYNAATDKWENMVDAGIIDPTKVTRTALQNAASIAALLLTTEAV 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CLOPH (60 kDa chaperonin OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=groL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.490e-27 Identity = 66/130 (50.77%), Postives = 86/130 (66.15%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 +KLR+EDA AT AA+EEGI+ GGG+A +H S V + KLE DER GA I+ KAL AP S IA NA + + G+NA+T+KY +M++ G++DP+KVTR ALQNA SVA LTT+A Sbjct: 390 KKLRMEDALAATRAAVEEGIIAGGGSAYIHASKEVAKLAAKLE-GDERTGAQIILKALEAPLSCIAQNAGLEGAVIVNKVREKKTGVGFNALTEKYVDMVEDGILDPSKVTRSALQNATSVASTFLTTEA 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CLOBM (60 kDa chaperonin OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=groL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.490e-27 Identity = 70/130 (53.85%), Postives = 85/130 (65.38%), Query Frame = -3 Query: 194 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA-DERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 580 KLRIEDA AT AA+EEGIVPGGG A + D +P I D D D +LG DI++KAL P IA+NA KASE GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A LTT+A Sbjct: 391 KLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKASEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEA 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CLOB6 (60 kDa chaperonin OS=Clostridium botulinum (strain 657 / Type Ba4) GN=groL PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.490e-27 Identity = 70/130 (53.85%), Postives = 85/130 (65.38%), Query Frame = -3 Query: 194 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA-DERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 580 KLRIEDA AT AA+EEGIVPGGG A + D +P I D D D +LG DI++KAL P IA+NA KASE GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A LTT+A Sbjct: 391 KLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGVEGSVIIEKVKASEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEA 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CHLMU (60 kDa chaperonin OS=Chlamydia muridarum GN=groL PE=2 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 4.490e-27 Identity = 63/131 (48.09%), Postives = 88/131 (67.18%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R++DA++AT AA+EEGI+PGGG AL+ + A L + DER+GA IV KAL AP IA NA + GY+A+ D Y +M++AG++DPAKVTR AL++AASVAG++LTT+A+ Sbjct: 392 KKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDERIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMIEAGILDPAKVTRSALESAASVAGLLLTTEAL 522 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |