CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_ANAVT (60 kDa chaperonin 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.490e-27 Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIVPGGG L HL+ + + +E GA IV +AL AP IA NA K + G+NA T+++ +M +AG++DPAKVTR ALQNAAS+AGMVLTT+ I Sbjct: 390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLTPELEVWANSNLKDEELTGALIVARALPAPLKRIAENAGQNGAVIAERVKEKAFNVGFNAATNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_ANASP (60 kDa chaperonin 1 OS=Anabaena sp. (strain PCC 7120) GN=groL1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.490e-27 Identity = 66/131 (50.38%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIVPGGG L HL+ + + +E GA IV +AL AP IA NA K + G+NA T+++ +M +AG++DPAKVTR ALQNAAS+AGMVLTT+ I Sbjct: 390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLTPELEVWANSNLKDEELTGALIVARALPAPLKRIAENAGQNGAVIAERVKEKAFNVGFNAATNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CLOTH (60 kDa chaperonin OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=groL PE=1 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27 Identity = 68/131 (51.91%), Postives = 87/131 (66.41%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLRIEDA AT AA+EEGIV GGG ALV++ V + D + DE+ G I+ +AL P IA NA KASE G++A +KY NM++AG++DPAKVTR ALQNAASVA MVLTT+++ Sbjct: 390 KKLRIEDALAATKAAVEEGIVAGGGTALVNVIPKVAKVLDTVS-GDEKTGVQIILRALEEPVRQIAENAGLEGSVIVEKVKASEPGIGFDAYNEKYVNMIEAGIVDPAKVTRSALQNAASVASMVLTTESV 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_SYNSC (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9605) GN=groL2 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27 Identity = 67/131 (51.15%), Postives = 83/131 (63.36%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIVPGGG L HL+ + +E +GA+IV AL AP IA NA KA G+NA + +Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEQWAASSLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKARAGAEGFNAASGEYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: RUBB_CHLRE (RuBisCO large subunit-binding protein subunit beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27 Identity = 60/133 (45.11%), Postives = 86/133 (64.66%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKAS--EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEG+VPGGG L+ LS+ V IK ++ D ++++GADI+++AL P LIA NA + GYNA TD +EN+++ G+IDP+KV RC+++NA SVA L + Sbjct: 276 KKLRVEDALNATRAAVEEGVVPGGGCTLLRLSEKVDVIKRRMTDPEQQMGADIIKRALCYPIKLIAQNAGVNGSVVMNEVMKNLDRPHYGYNAATDSFENLMETGIIDPSKVVRCSMENAVSVAKTFLLADVV 408
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_OCEIH (60 kDa chaperonin OS=Oceanobacillus iheyensis GN=groL PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27 Identity = 67/131 (51.15%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA N+T A +EEG+VPGGG ALV++ V + + DE GA IV +AL P I HNA K + GYNA TD++ NM++AG++DP KVTR ALQNAASVA M LTT+A+ Sbjct: 390 RKLRIEDALNSTRAGVEEGMVPGGGTALVNIHRQVSELT---LEGDEATGASIVLRALEEPVRQIVHNAGLEGSIIVERLKGEKVGIGYNAATDEWVNMVEAGIVDPTKVTRSALQNAASVAAMFLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_MACCJ (60 kDa chaperonin OS=Macrococcus caseolyticus (strain JCSC5402) GN=groL PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27 Identity = 70/131 (53.44%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA N+T AA+EEGIV GGG ALV + + V A++ D G IV KAL AP IA NA K +E GYNA TD++ NM+ AG++DP KVTR ALQNAASVA M LTT+A+ Sbjct: 390 RKLRIEDALNSTRAAVEEGIVAGGGTALVSIYNKVAAVE---ATGDVATGVKIVLKALEAPIRQIAENAGLEGSVIVEKIKHAETGVGYNAATDEWVNMIDAGIVDPTKVTRSALQNAASVAAMFLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_EXIS2 (60 kDa chaperonin OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=groL PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27 Identity = 68/131 (51.91%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA NAT AA+EEGIV GGG A +H++ V +I + DE G +IV +AL AP IA NA K GYNA TD+Y +M++ G++DPAKVTR ALQNAASV+ M LTT+A+ Sbjct: 390 RKLRIEDALNATRAAVEEGIVAGGGTAFIHVTKAVESIL-AVTTGDEATGVNIVLRALEAPLRQIAENAGQEGSVIVERLKHEAQGMGYNAATDEYVDMIETGIVDPAKVTRSALQNAASVSAMFLTTEAV 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_DICT6 (60 kDa chaperonin OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=groL PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27 Identity = 65/132 (49.24%), Postives = 91/132 (68.94%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K RIEDA +AT AA+EEGIVPGGG AL+ + A+ D K+++ DER+G +IV+++L P LIA+NA K + GY+A D++ NM +AG++DPAKVTR ALQNAAS+A +VLTT+ + Sbjct: 392 KKHRIEDALSATKAAVEEGIVPGGGVALLRT---IKALDDVKVDNEDERIGVEIVRRSLDVPLKLIANNAGKEGSIIAEKVKEMDGPMGYDAANDRFVNMFEAGIVDPAKVTRSALQNAASIAALVLTTEGL 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CHLTR (60 kDa chaperonin OS=Chlamydia trachomatis GN=groL PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27 Identity = 63/131 (48.09%), Postives = 88/131 (67.18%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R++DA++AT AA+EEGI+PGGG AL+ + A L + DE++GA IV KAL AP IA NA + GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A+ Sbjct: 392 KKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEAL 522 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |