CN189514

Overview
NameCN189514
Unique NameCN189514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:550..1134. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CHLTB (60 kDa chaperonin OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=groL PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27
Identity = 63/131 (48.09%), Postives = 88/131 (67.18%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA            +     GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A+
Sbjct:  392 KKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEAL 522          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CHLTA (60 kDa chaperonin OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=groL PE=2 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27
Identity = 63/131 (48.09%), Postives = 88/131 (67.18%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA            +     GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A+
Sbjct:  392 KKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEAL 522          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CHLT2 (60 kDa chaperonin OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=groL PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27
Identity = 63/131 (48.09%), Postives = 88/131 (67.18%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +K R++DA++AT AA+EEGI+PGGG AL+     + A    L + DE++GA IV KAL AP   IA NA            +     GY+A+ D Y +ML+AG++DPAKVTR AL++AASVAG++LTT+A+
Sbjct:  392 KKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMLEAGILDPAKVTRSALESAASVAGLLLTTEAL 522          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26
Identity = 65/132 (49.24%), Postives = 87/132 (65.91%), Query Frame = -3
Query:  191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583
            +KLR+EDA NAT AA+EEGIV GGG  L+ L+  V AIKD L + +E++GADIV++AL  P  LIA NA            +S+    GYNA T KYE+++ AG+IDP KV RC L++A+SVA   L +  +
Sbjct:  440 KKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCV 571          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_EUBE2 (60 kDa chaperonin OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=groL PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26
Identity = 65/130 (50.00%), Postives = 87/130 (66.92%), Query Frame = -3
Query:  191 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 580
            KLR+EDA NAT AA+EEG+V GGG+A +H S  V  +   L   DE++GA I+ KAL AP   IA+NA           + SE  TG++A  ++Y NM+ AG++DPAKVTR ALQNA SVA  +LTT+++
Sbjct:  391 KLRMEDALNATRAAVEEGVVSGGGSAYIHASKKVAELVKTLS-GDEKIGAQIILKALEAPLFHIAYNAGLEGAVIINKVRESEVGTGFDAYKEEYVNMIDAGILDPAKVTRSALQNATSVASTLLTTESV 519          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CLOBL (60 kDa chaperonin OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=groL PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26
Identity = 69/130 (53.08%), Postives = 85/130 (65.38%), Query Frame = -3
Query:  194 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA-DERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 580
            KLRIEDA  AT AA+EEGIVPGGG A +   D +P I D   D  D +LG DI++KAL  P   IA+NA           KA+E   GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A   LTT+A
Sbjct:  391 KLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEA 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CLOBK (60 kDa chaperonin OS=Clostridium botulinum (strain Okra / Type B1) GN=groL PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26
Identity = 69/130 (53.08%), Postives = 85/130 (65.38%), Query Frame = -3
Query:  194 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA-DERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 580
            KLRIEDA  AT AA+EEGIVPGGG A +   D +P I D   D  D +LG DI++KAL  P   IA+NA           KA+E   GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A   LTT+A
Sbjct:  391 KLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEA 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CLOBJ (60 kDa chaperonin OS=Clostridium botulinum (strain Kyoto / Type A2) GN=groL PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26
Identity = 69/130 (53.08%), Postives = 85/130 (65.38%), Query Frame = -3
Query:  194 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA-DERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 580
            KLRIEDA  AT AA+EEGIVPGGG A +   D +P I D   D  D +LG DI++KAL  P   IA+NA           KA+E   GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A   LTT+A
Sbjct:  391 KLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEA 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CLOBH (60 kDa chaperonin OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=groL PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26
Identity = 69/130 (53.08%), Postives = 85/130 (65.38%), Query Frame = -3
Query:  194 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA-DERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 580
            KLRIEDA  AT AA+EEGIVPGGG A +   D +P I D   D  D +LG DI++KAL  P   IA+NA           KA+E   GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A   LTT+A
Sbjct:  391 KLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEA 517          
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CLOB1 (60 kDa chaperonin OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=groL PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26
Identity = 69/130 (53.08%), Postives = 85/130 (65.38%), Query Frame = -3
Query:  194 KLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA-DERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 580
            KLRIEDA  AT AA+EEGIVPGGG A +   D +P I D   D  D +LG DI++KAL  P   IA+NA           KA+E   GY+A+ DKY +ML+ G++DP KVTR ALQNAAS+A   LTT+A
Sbjct:  391 KLRIEDALAATKAAVEEGIVPGGGTAYI---DIIPKIADLTSDIIDVKLGIDIIRKALEEPVRQIANNAGAEGSVIIEKVKATEAGVGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEA 517          
The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_CHLTB7.658e-2748.0960 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH60_CHLTA7.658e-2748.0960 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
CH60_CHLT27.658e-2748.0960 kDa chaperonin OS=Chlamydia trachomatis (strain... [more]
RUBB_PEA1.000e-2649.24RuBisCO large subunit-binding protein subunit beta... [more]
CH60_EUBE21.000e-2650.0060 kDa chaperonin OS=Eubacterium eligens (strain A... [more]
CH60_CLOBL1.000e-2653.0860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBK1.000e-2653.0860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBJ1.000e-2653.0860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBH1.000e-2653.0860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOB11.000e-2653.0860 kDa chaperonin OS=Clostridium botulinum (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001P19_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001P19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bp
TTTTTTTTTTTTTTTTTAAAAGACACGATTTTATATCAATTAAGTAAAAC
TTGTCTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAAACCTC
CTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTGTGGCG
GAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAGCCTGA
GTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCACATCT
TGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTCATACT
TGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTAGCTTTCACCTTC
TCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGTGATGC
AGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTCATCTG
CATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGATGAACC
AGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCAAAAGT
TGCATTCTTGGCATCTTCAATACGGAGTTTACGGT
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