CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_ALKMQ (60 kDa chaperonin OS=Alkaliphilus metalliredigens (strain QYMF) GN=groL PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26 Identity = 65/132 (49.24%), Postives = 90/132 (68.18%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA--DERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 RKLRIEDA NAT AA+EEGIV GGG ALV++ +PA++ LE + DE+ G I+++AL P IA NA +S+ GY+ + +KY NM++AG++DP KVTR ALQNAAS++ M+LTT++ Sbjct: 390 RKLRIEDALNATRAAVEEGIVAGGGTALVNV---IPAVEALLEGSQGDEKTGIQIIRRALEEPLRQIAENAGLEGSVIVNKVMSSDKGIGYDVLNNKYVNMIEAGIVDPTKVTRSALQNAASISAMLLTTES 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_SYNS9 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9902) GN=groL1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.306e-26 Identity = 67/131 (51.15%), Postives = 82/131 (62.60%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIVPGGG L HL+ + + +E +GA+IV AL AP IA NA K+ GYNA Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 390 KKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEEWANGNLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRSNNEGYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STAAB (60 kDa chaperonin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=groL PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.706e-26 Identity = 69/131 (52.67%), Postives = 86/131 (65.65%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA N+T AA+EEGIV GGG ALV++ V I+ + D G +IV KAL AP IA NA K +E G+NA TD++ NML+AG++DP KVTR ALQ+AASVA M LTT+A+ Sbjct: 390 RKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATDEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_ODOSI (60 kDa chaperonin, chloroplastic OS=Odontella sinensis GN=groL PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.706e-26 Identity = 63/131 (48.09%), Postives = 83/131 (63.36%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIVPGGGA L HL++++ DE +GA I+ +A+VAP IA NA + E+ GYNA + + NM G++DPAKVTR LQNA S+A M+LTT+ I Sbjct: 392 KKLRLEDAINATRAAVEEGIVPGGGATLAHLAENLLTWAKINLKEDELIGAMIISRAIVAPLKRIAENAGINGPVIIEKVQQQEFEIGYNAAKNVFGNMYDEGIVDPAKVTRSGLQNATSIASMILTTECI 522
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_DESAP (60 kDa chaperonin OS=Desulforudis audaxviator (strain MP104C) GN=groL PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.706e-26 Identity = 64/131 (48.85%), Postives = 90/131 (68.70%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLRIEDA NAT AA+EEGIVPGGG V++ + ++ +L D ER G DI+++AL AP IA+NA K S G++A++++Y +M+ AG++DPAKVTR ALQNAAS+A M+LTT+ + Sbjct: 391 KKLRIEDALNATRAAVEEGIVPGGGTVYVNVIPVLNGLEPELPD--ERTGVDIIKRALEAPLRQIANNAGVEGSIVVEKVKESPAGVGFDALSEQYTDMIGAGIVDPAKVTRIALQNAASIAAMILTTETL 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_SYNE7 (60 kDa chaperonin OS=Synechococcus elongatus (strain PCC 7942) GN=groL PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.228e-26 Identity = 66/131 (50.38%), Postives = 81/131 (61.83%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLR+EDA NAT AA+EEGIVPGGG L HL+ + +E GA IV +AL AP IA NA K + GY+A +++ NM AG++DPAKVTR ALQNAAS+A MVLTT+ I Sbjct: 390 RKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPQLEEWATANLSGEELTGAQIVARALTAPLKRIAENAGLNGAVISERVKELPFDEGYDASNNQFVNMFTAGIVDPAKVTRSALQNAASIAAMVLTTECI 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LACGA (60 kDa chaperonin OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=groL PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.228e-26 Identity = 67/131 (51.15%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RK RIEDA NAT AA+EEG V GGG ALV + + K + D + G +IV KAL AP IA NA + + GYNA TDK+ENM++AG+IDP KVTR ALQNAAS+A ++LTT+A+ Sbjct: 390 RKYRIEDALNATRAAVEEGYVAGGGTALVDVMKSIQG-NVKGDSQDAQTGVNIVMKALGAPVRQIAENAGKDGAVILDHLEHEDPEIGYNAATDKWENMVKAGIIDPTKVTRSALQNAASIAALLLTTEAV 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CYACA (60 kDa chaperonin, chloroplastic OS=Cyanidium caldarium GN=groL PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.228e-26 Identity = 64/131 (48.85%), Postives = 88/131 (67.18%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+ED+ NAT AAIEEGIVPGGG ALVH+S ++ +DE LGA+IV++A +AP IA N+ + + GY+A+++ +M AG+IDPAKVTR A+QNAAS+A MVLTT+ + Sbjct: 391 KKLRLEDSINATKAAIEEGIVPGGGTALVHISANLKQWAKINLSSDELLGANIVEQASLAPLHKIAENSGKNGSLIVEALEHKNFEIGYDALSNSLVDMYDAGIIDPAKVTRSAIQNAASIASMVLTTECV 521
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_BACLD (60 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groL PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.228e-26 Identity = 68/131 (51.91%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA N+T AA+EEGIV GGG ALV++ + V A++ + DE G +IV +AL P IAHNA K E GYNA T ++ NM+ G++DP KVTR ALQNAASVA M LTT+A+ Sbjct: 390 RKLRIEDALNSTRAAVEEGIVSGGGTALVNVYNKVAALE---AEGDELTGINIVLRALEEPIRQIAHNAGLEGSVIVERLKNEEIGVGYNAATGEWVNMIDKGIVDPTKVTRSALQNAASVAAMFLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH601_SYNP6 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groL1 PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.228e-26 Identity = 66/131 (50.38%), Postives = 81/131 (61.83%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLR+EDA NAT AA+EEGIVPGGG L HL+ + +E GA IV +AL AP IA NA K + GY+A +++ NM AG++DPAKVTR ALQNAAS+A MVLTT+ I Sbjct: 390 RKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPQLEEWATANLSGEELTGAQIVARALTAPLKRIAENAGLNGAVISERVKELPFDEGYDASNNQFVNMFTAGIVDPAKVTRSALQNAASIAAMVLTTECI 520 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |