CN189514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: RUBB_BRANA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.910e-26 Identity = 64/132 (48.48%), Postives = 87/132 (65.91%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIV GGG L+ L+ V AIK L++ +E++GADIV++AL P LIA NA +++ GYNA T KYE+++ AG+IDP KV RC L++AASVA L + + Sbjct: 446 KKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKAALDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCV 577
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: RUBB_ARATH (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana GN=At1g55490 PE=1 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 2.910e-26 Identity = 64/132 (48.48%), Postives = 87/132 (65.91%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +KLR+EDA NAT AA+EEGIV GGG L+ L+ V AIK L++ +E++GADIV++AL P LIA NA +++ GYNA T KYE+++ AG+IDP KV RC L++AASVA L + + Sbjct: 446 KKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCV 577
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LACDB (60 kDa chaperonin OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=groL PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.910e-26 Identity = 64/131 (48.85%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 R+ R+EDA NAT AA++EG V GGG ALV++ + V A K +D E+ G +IV +AL AP IA NA + + GYNA DKY NM+ G+IDP +VTR ALQNAAS+AG++LTT+A+ Sbjct: 390 RRYRVEDALNATRAAVDEGYVAGGGTALVNVEEAVKATKGDTDD--EQTGINIVARALTAPVRQIAENAGQEGSVVVDHLRKVDPEVGYNAAEDKYVNMIDEGIIDPTQVTRSALQNAASIAGLLLTTEAV 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_LACDA (60 kDa chaperonin OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=groL PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.910e-26 Identity = 64/131 (48.85%), Postives = 85/131 (64.89%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 R+ R+EDA NAT AA++EG V GGG ALV++ + V A K +D E+ G +IV +AL AP IA NA + + GYNA DKY NM+ G+IDP +VTR ALQNAAS+AG++LTT+A+ Sbjct: 390 RRYRVEDALNATRAAVDEGYVAGGGTALVNVEEAVKATKGDTDD--EQTGINIVARALTAPVRQIAENAGQEGSVVVDHLRKVDPEVGYNAAEDKYVNMIDEGIIDPTQVTRSALQNAASIAGLLLTTEAV 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_DICTD (60 kDa chaperonin OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=groL PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.910e-26 Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K RIEDA +AT AA+EEGIVPGGG AL+ + A+ D K+++ DER+G +IV+++L P LIA+NA K + GY+A D++ NM AG++DP KVTR ALQNAAS+A +VLTT+ + Sbjct: 392 KKHRIEDALSATKAAVEEGIVPGGGVALIRT---IKALDDIKVDNEDERIGVEIVRRSLDVPLKLIANNAGKEGSIIAEKVKEMDGPMGYDAARDRFVNMFDAGIVDPCKVTRSALQNAASIAALVLTTEGL 520
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH602_SYNAS (60 kDa chaperonin 2 OS=Syntrophus aciditrophicus (strain SB) GN=groL2 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.910e-26 Identity = 66/131 (50.38%), Postives = 86/131 (65.65%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 +K R+EDA NAT AA+EEGIVPGGG A + + A+K + DE++G +IV+KAL P +IA NA K G+NA T+ YE+M++AGVIDP KVTR ALQNAASVA ++LTTQ + Sbjct: 392 KKARVEDALNATRAAVEEGIVPGGGVAYIRTLPILEALK---LEGDEQVGVNIVRKALEEPLKMIAANAGMEGTIVVEKVKEQSGAFGFNARTEVYEDMIEAGVIDPTKVTRFALQNAASVASLMLTTQCM 519
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_STACT (60 kDa chaperonin OS=Staphylococcus carnosus (strain TM300) GN=groL PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.801e-26 Identity = 70/131 (53.44%), Postives = 84/131 (64.12%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLRIEDA N+T AA+ EGIV GGG ALV++ V I+ + D G +IV KAL AP IA NA K +E GYNA TD++ NML AG++DP KVTR ALQNAASVA M LTT+A+ Sbjct: 390 RKLRIEDALNSTRAAVGEGIVAGGGTALVNVYKQVSEIE---AEGDVETGINIVLKALEAPVRQIAENAGLEGSIIVEKLKHAEPGIGYNAATDEWVNMLDAGIVDPTKVTRSALQNAASVAAMFLTTEAV 517
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CLODI (60 kDa chaperonin OS=Clostridium difficile GN=groL PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.801e-26 Identity = 68/132 (51.52%), Postives = 87/132 (65.91%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 RKLRIEDA NAT AA+EEGIV GGG A V + +PAI +E + + +LGA IV+KAL P IA NA SE TG++A+ +KY NM++AG++DP KV+R ALQNAAS+A LTT+A Sbjct: 390 RKLRIEDALNATRAAVEEGIVAGGGTAFVSV---IPAIGTLIESLEGEVKLGAQIVKKALEEPLRQIAINAGLEGAVIVQNVVNSEAETGFDALNEKYVNMIEAGIVDPTKVSRSALQNAASIASTFLTTEA 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH60_CLOD6 (60 kDa chaperonin OS=Clostridium difficile (strain 630) GN=groL PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.801e-26 Identity = 68/132 (51.52%), Postives = 87/132 (65.91%), Query Frame = -3 Query: 194 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 583 RKLRIEDA NAT AA+EEGIV GGG A V + +PAI +E + + +LGA IV+KAL P IA NA SE TG++A+ +KY NM++AG++DP KV+R ALQNAAS+A LTT+A Sbjct: 390 RKLRIEDALNATRAAVEEGIVAGGGTAFVSV---IPAIGTLIESLEGEVKLGAQIVKKALEEPLRQIAINAGLEGAVIVQNVVNSEAETGFDALNEKYVNMIEAGIVDPTKVSRSALQNAASIASTFLTTEA 518
BLAST of CN189514 vs. ExPASy Swiss-Prot
Match: CH603_ANAVT (60 kDa chaperonin 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL3 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.801e-26 Identity = 64/132 (48.48%), Postives = 87/132 (65.91%), Query Frame = -3 Query: 191 RKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPA-IKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 583 RKLR+EDA NAT AA+EEGIVPGGG + H++ + K +++D +E G IV +AL AP IA NA + + GY+A+ +K+ NM +AG++DPAKVTR ALQNAAS+ GMVLTT+ + Sbjct: 390 RKLRLEDAINATKAAVEEGIVPGGGTTIAHIAPQLEEWAKSQMKD-EELTGTMIVARALYAPLRRIADNAGANGAVIVERVRELPFDEGYDAVANKFVNMFEAGIVDPAKVTRSALQNAASIGGMVLTTEGV 520 The following BLAST results are available for this feature:
BLAST of CN189514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189514 ID=CN189514; Name=CN189514; organism=Citrus sinensis; type=EST; length=585bpback to top |