EY757014

Overview
NameEY757014
Unique NameEY757014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNE7 (50S ribosomal protein L3 OS=Synechococcus elongatus (strain PCC 7942) GN=rplC PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.045e-52
Identity = 101/177 (57.06%), Postives = 128/177 (72.32%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQ+KT ATDGY+A+QIG+  VR+K+L+KPELGHL K+G  P+RHL E+R+ S DG E GQ L  +  F  G  VDV G TIG+GF G  KRH F RG M+HGSK+HR  GS GAGTTPGRVY GK+M GR G     I  L +V++D D  ++++KG+VPGKPG LL + PA +VG+
Sbjct:   36 TQIKTVATDGYNAIQIGFLEVREKQLSKPELGHLSKAGAPPLRHLLEYRVPSTDGLELGQALTADR-FEAGQKVDVQGHTIGRGFTGYQKRHGFARGPMSHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRSGNDKTTIRGLTVVRVDADRNLLLVKGSVPGKPGALLNITPATVVGQ 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNY3 (50S ribosomal protein L3 OS=Synechocystis sp. (strain PCC 6803) GN=rplC PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.329e-52
Identity = 98/177 (55.37%), Postives = 132/177 (74.58%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQVKT+ TDGY+A+Q+G+  V++K L+KPELGHL+KS   PMRHL+E+RL      + G  +   +IF  GDLVDV+G ++G+GF G  KRHNFRRG MTHGSK+HR  GS GAGTTPGRVY GK+M G+ G +   + +L +V++D +  +++IKGA+PGKPG LL + PAK VG+
Sbjct:   37 TQVKTQDTDGYNAIQVGFLPVKEKALSKPELGHLKKSNTDPMRHLKEYRLTDAPNLQPGDAVT-ADIFQAGDLVDVAGQSMGRGFAGYQKRHNFRRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGQYGASQVTVRRLTVVRVDAERNLLIIKGALPGKPGTLLNITPAKTVGR 212          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_ANAVT (50S ribosomal protein L3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplC PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.971e-51
Identity = 99/177 (55.93%), Postives = 131/177 (74.01%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQVK++ TDGY A+Q+GY  V+ K L +P LGHL KS    +RHL+E+   S   +  GQ++   +IF+ G+LVDV GT+IG+GF G  KR+NF RG M+HGSK+HR  GSIGAGTTPGRVY GK+M GR+GGT   I KL ++++D +  +++IKGAVPGKPG+LL + PAK VGK
Sbjct:   36 TQVKSKQTDGYAAIQVGYGEVKPKALNRPLLGHLAKSSAPALRHLKEYHTDSSSDYALGQEIK-ADIFSAGELVDVIGTSIGRGFAGNQKRNNFGRGPMSHGSKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVIRVDAERNLLLIKGAVPGKPGSLLSIVPAKKVGK 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CYAP4 (50S ribosomal protein L3 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplC PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.575e-51
Identity = 98/177 (55.37%), Postives = 128/177 (72.32%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQ+KT+ TDGY A+Q+ +  VR K L+K ELGHL KS   PMRHL E+R   +D F+ GQ L   ++F+ G +VDV+GT+IG+GF G  KRHNF+RG M HGSK+HR  GS GAGTTPGRVY GK+M G++G     I +L IV++D +  +V+IKGAVPGKPG L+ + PA  VG+
Sbjct:   36 TQIKTKQTDGYAAIQVAFGEVRAKSLSKAELGHLAKSNTAPMRHLHEYRTGEVDQFQVGQVLK-ADLFSAGQVVDVTGTSIGRGFAGYQKRHNFKRGPMAHGSKNHRLPGSTGAGTTPGRVYPGKRMAGQLGSARTTIRQLTIVRVDPERNLVLIKGAVPGKPGALVSITPANSVGR 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3_BIGNA (50S ribosomal protein L3, chloroplastic OS=Bigelowiella natans GN=RPL3 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.278e-50
Identity = 95/185 (51.35%), Postives = 132/185 (71.35%), Query Frame = 3
Query:   66 EKGILCTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIP-MRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKN 617
            E G + TQVKT+ TDGYDAVQ+ Y+  RD+ +  PE  HL+K G +  M+HL+EF++  +  F  GQ+L  EE+F  GDLVDVSGT+ GKGFQG I+R   +RG M+HGSKSHRQ GSIG   TP RVYKG KM GRMG   + + KL ++ ++++ + ++++G+VPGK G ++ + P KIVGK+
Sbjct:  117 EAGNVVTQVKTKETDGYDAVQLAYKETRDRTIPWPERQHLRKHGNVKAMKHLKEFKIADVSEFTPGQQLKAEELFEVGDLVDVSGTSSGKGFQGSIRRWGMKRGPMSHGSKSHRQHGSIGCSATPSRVYKGLKMAGRMGNERKTVKKLPVMMVNDEEKYIVVRGSVPGKKGTIVELRPTKIVGKH 301          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_GLOVI (50S ribosomal protein L3 OS=Gloeobacter violaceus GN=rplC PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.669e-50
Identity = 99/178 (55.62%), Postives = 131/178 (73.60%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGL-IPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQVK+EATDGY AVQ+G+   R+K LT+PE+GH +K+GL  P+RHL+EFRL     +  GQ++  + +F  G LVDV GT+IGKGF GG KRH+F RG M HGSK+HR  GSIGAGTTPGRV+ GK+MPGRMG     + KL +V++  +  V++I+G +PG  G LL ++PAK VG+
Sbjct:   36 TQVKSEATDGYTAVQLGFGTAREKVLTRPEVGHCKKAGLEAPVRHLREFRLPDSSQYTPGQQITVD-LFAAGQLVDVVGTSIGKGFAGGQKRHHFGRGPMAHGSKNHRAPGSIGAGTTPGRVFPGKRMPGRMGNERVTVRKLTVVRVIPERNVILIQGGLPGVEGGLLMISPAKSVGR 212          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_ANASP (50S ribosomal protein L3 OS=Anabaena sp. (strain PCC 7120) GN=rplC PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.669e-50
Identity = 98/177 (55.37%), Postives = 129/177 (72.88%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQVK++ TDGY A+Q+GY  V+ K L +P LGHL KS    +RHL+E+       +  GQ++   +IF+ G+LVDV GT+IG+GF G  KR+NF RG M+HGSK+HR  GSIGAGTTPGRVY GK+M GR+GGT   I KL ++++D +  +++IKGAVPGKPG LL + PAK VGK
Sbjct:   36 TQVKSKQTDGYAAIQVGYGEVKPKALNRPLLGHLAKSSAPALRHLKEYHTDGSSDYALGQEIK-ADIFSVGELVDVIGTSIGRGFAGNQKRNNFGRGPMSHGSKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVIRVDAERNLLLIKGAVPGKPGALLSIVPAKKVGK 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_NOSP7 (50S ribosomal protein L3 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplC PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.180e-50
Identity = 98/176 (55.68%), Postives = 128/176 (72.73%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611
            TQVKT+ TDGY A+Q+G+  V+ K L +P LGHL KS    +RHL E+   S   +  GQ++   +IF+EG +VDV GT+IG+GF G  KR+NF RG M+HGSK+HR  GSIGAGTTPGRVY GK+M GR+GG    I KL IV++D +  +++IKGA+PGKPG L+ V PAK+VG
Sbjct:   36 TQVKTKQTDGYFAIQVGFGEVKPKALNRPLLGHLAKSSAPALRHLNEYHTDSSSDYALGQQIK-ADIFSEGQIVDVVGTSIGRGFAGNQKRNNFGRGPMSHGSKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGKRITIRKLTIVRVDAERNLLLIKGAIPGKPGALVSVVPAKVVG 210          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CLOCE (50S ribosomal protein L3 OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=rplC PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.342e-50
Identity = 93/176 (52.84%), Postives = 125/176 (71.02%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            Q KT  TDGYDA+++GY +V +KKL+KP LG   K+ L PM+HL+EFRL+ I GFE GQ++  E +F  GD +DVSG + GKGFQG  KR+  R G  THGS  HR++GS+G+GT PGRV+KGKK+PG MG  T  +  LE+V++D+D  +++IKGA+PG  G LL +      GK
Sbjct:   37 QKKTVETDGYDAIKVGYVKVAEKKLSKPNLGQFSKTKLAPMKHLKEFRLEDISGFEVGQEIKAENMFQSGDKIDVSGVSKGKGFQGVTKRYGQRTGPNTHGSMYHRRIGSMGSGTNPGRVFKGKKLPGHMGRETITVQNLEVVRVDSDRNLILIKGAIPGPKGGLLVIKNTVKSGK 212          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROM1 (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain NATL1A) GN=rplC PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.845e-49
Identity = 98/179 (54.75%), Postives = 130/179 (72.63%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKNI 620
            TQ+K+  TDGY AVQIG++ +R+K + KP  GHL KSG   +RHL+E+R+++   FE G  +  ++ F +G  VDVSG T+G+GF G  KRH F RG M+HGSK+HR  GSIGAGTTPGRVY GK+M GRMGG       LEI+KID +  ++++KG+VPGKPG+LL + PAK VG +I
Sbjct:   36 TQLKSADTDGYAAVQIGFQLIREKLINKPSKGHLAKSGNDLLRHLREYRVENSSEFELGASITVDD-FEKGQKVDVSGDTMGRGFAGYQKRHGFSRGPMSHGSKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEILKIDTNHNLLVVKGSVPGKPGSLLNIRPAKRVGVSI 213          
The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL3_SYNE71.045e-5257.0650S ribosomal protein L3 OS=Synechococcus elongatu... [more]
RL3_SYNY32.329e-5255.3750S ribosomal protein L3 OS=Synechocystis sp. (str... [more]
RL3_ANAVT1.971e-5155.9350S ribosomal protein L3 OS=Anabaena variabilis (s... [more]
RL3_CYAP42.575e-5155.3750S ribosomal protein L3 OS=Cyanothece sp. (strain... [more]
RK3_BIGNA1.278e-5051.3550S ribosomal protein L3, chloroplastic OS=Bigelow... [more]
RL3_GLOVI1.669e-5055.6250S ribosomal protein L3 OS=Gloeobacter violaceus ... [more]
RL3_ANASP1.669e-5055.3750S ribosomal protein L3 OS=Anabaena sp. (strain P... [more]
RL3_NOSP72.180e-5055.6850S ribosomal protein L3 OS=Nostoc punctiforme (st... [more]
RL3_CLOCE6.342e-5052.8450S ribosomal protein L3 OS=Clostridium cellulolyt... [more]
RL3_PROM11.845e-4954.7550S ribosomal protein L3 OS=Prochlorococcus marinu... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-016-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGTGTCGTACTTCGCGCCCGACGGAACTGTTGTTCCGGTGA
CTGTAGTTGGGTTCAGAGAAGGGAATATTGTGCACCCAAGTTAAGACTGA
AGCCACTGACGGGTACGACGCCGTTCAGATTGGTTATAGGAGAGTAAGGG
ACAAGAAGCTGACGAAACCTGAGCTGGGTCACTTGCAAAAGTCTGGGTTA
ATACCCATGAGGCATTTGCAGGAGTTTAGGTTACAGTCTATTGATGGGTT
TGAGGCTGGCCAAAAGTTGGCTTTTGAAGAGATTTTTAATGAAGGGGATC
TTGTCGATGTTTCTGGGACTACTATTGGCAAGGGTTTTCAAGGTGGCATT
AAGCGGCACAATTTCAGAAGGGGTGCGATGACCCATGGTTCTAAGAGTCA
TAGACAATTGGGTTCCATTGGTGCTGGAACAACTCCGGGCCGTGTATACA
AGGGGAAGAAGATGCCTGGAAGAATGGGAGGGACAACAAGGAAGATCTGA
AAGCTCGAGATTGTAAAAATTGATAATGACCTTCGTGTTGTAATGATAAA
AGGGGCTGTCCCTGGTAAGCCCGGAAATCTTCTGCGTGTAGCACCAGCTA
AGATTGTTGGGAAGAACATACCAAATAACTAGGTTGGTGCATTATTCTGA
TTGCTTCGCTTTGTGCAGTTCTACATTGGCAAAGAGATTAGTCTTTGTAA
ACCCTTCGTTTTGTGAGTGGAATTTAGACTTTCAGTTAACATCTTGTGAT
GTATCATTGGCTCCTTTGCCAGATACATTTCTATCTCTCTTAGGATTTTG
AATTAAGATTGCCTTCAGCGGAGAAAACCCATATTAATCTTACAAGGGCA
TACACTTTGCCAAAAAACTTTCTTGAGAGAACTCCGCAATTGGGATTTGT
GTCAAACCAA
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