EY757014

Overview
NameEY757014
Unique NameEY757014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3_TOBAC (50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum GN=RPL3 PE=1 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 6.931e-89
Identity = 156/191 (81.68%), Postives = 176/191 (92.15%), Query Frame = 3
Query:   57 LGSEKGILCTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKNIPNN 629
            +G  +G + TQ+KTEATDGY+AVQ+GYRRVRD+KLTKPE+GHL+KSG+IP+RHLQEFRLQSIDGFE  QKL F E+F EGDLVDVSGTTIGKGFQGGIKRHNF+RG MTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGT RKI KL+IVKID+ L ++MIKGA+PGKPGNLLR+APAKIVGKNIP +
Sbjct:   69 VGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKLTKPEMGHLEKSGIIPLRHLQEFRLQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGQMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDDQLNIIMIKGALPGKPGNLLRIAPAKIVGKNIPKS 259          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3A_ARATH (50S ribosomal protein L3-1, chloroplastic OS=Arabidopsis thaliana GN=RPL3A PE=1 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 2.087e-85
Identity = 153/191 (80.10%), Postives = 169/191 (88.48%), Query Frame = 3
Query:   57 LGSEKGILCTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKNIPNN 629
            +G  +G + TQ+KT ATDGYDAVQIGYRRVRDKKLTKPE GHLQK+G IPMRHLQEFRL +I+GFE  QKL F+EIF EGDLVDV+GTTIGKGFQGGIKRH+F+RG MTHGSKSHR LGSIGAGTTPGRVYKGKKMPGRMGGT  KI KL+IVK+D +L VVMIKGA+PGKPGNLLR+ PAKIVG NIP N
Sbjct:   81 VGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVNIPKN 271          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNP2 (50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplC PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.140e-57
Identity = 105/177 (59.32%), Postives = 135/177 (76.27%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQ+KT  TDGY +VQIGY  V++K LTKP+LGHL+K+   P+RHL+E+RL  + G+E GQ +    IF  G +VDVSG TIG+GF G  KRHNF+RG MTHGSK+HR  GS GAGTTPGRVY GK+M GR GGT   + KLE+V++D +  +++IKGA+PGK GNLL +AP+ IVG+
Sbjct:   37 TQIKTSETDGYTSVQIGYGDVKEKNLTKPQLGHLKKADAAPLRHLKEYRLDDVSGYELGQAIT-ANIFEAGQVVDVSGNTIGRGFAGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTKITVRKLEVVRVDEEKNLLLIKGAIPGKAGNLLSIAPSNIVGQ 212          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CYAP7 (50S ribosomal protein L3 OS=Cyanothece sp. (strain PCC 7424) GN=rplC PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.140e-57
Identity = 107/177 (60.45%), Postives = 137/177 (77.40%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQVKT ATDGY+++QIGY  V++K L KP+LGHL+KS   P+RHL+E+RL++   ++ G  +  + +F  GDLVDV+G TIG+GF G  KRHNF+RG+MTHGSK+HR  GS GAGTTPGRVY GK+M GR GGT   I KL +V+ID +  +++IKGAVPGKPGNLL + PAK VGK
Sbjct:   37 TQVKTPATDGYNSIQIGYGEVKEKALNKPKLGHLKKSASTPVRHLKEYRLENAADYQLGDGIKVD-LFKPGDLVDVAGKTIGRGFAGYQKRHNFKRGSMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTVVQIDTERNLILIKGAVPGKPGNLLSITPAKTVGK 212          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_MICAN (50S ribosomal protein L3 OS=Microcystis aeruginosa (strain NIES-843) GN=rplC PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 9.136e-57
Identity = 105/177 (59.32%), Postives = 136/177 (76.84%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQVKT+ TDGY+++Q+GY+ V++K L KP LGHL K+G+ P+RHL E+RL+    +  GQ++   +IF EGDLVDV+GTTIG+GF G  KRHNF+RG MTHGSK+HR  GS GAGTTPGRV+ GK+M G+ G T   I KL +VKID++  +++IKGAVPGKPG LL + PAK  GK
Sbjct:   37 TQVKTKKTDGYESIQVGYKTVKEKALNKPLLGHLAKAGVSPLRHLIEYRLEDASAYTLGQEIT-ADIFQEGDLVDVAGTTIGRGFSGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSVVKIDSERNLILIKGAVPGKPGTLLNITPAKKFGK 212          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_ACAM1 (50S ribosomal protein L3 OS=Acaryochloris marina (strain MBIC 11017) GN=rplC PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.193e-56
Identity = 104/178 (58.43%), Postives = 136/178 (76.40%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKN 617
            TQ+KT  TDGY A+QIGY    +K LT+PELGHL+KSG  P+RHLQE+RL  +  +E GQ ++  ++F+EG LVD+SGT+IG+GF G  KRHNFRRG M HGSK+HR  GS GAGTTPGR+Y GK+M G+MG   + I KL +V++D +  V++IKG+VPGKPG LL + PA IVG++
Sbjct:   36 TQIKTAQTDGYTAIQIGYGSTTEKALTRPELGHLKKSGSTPVRHLQEYRLADVSEYELGQSIS-ADLFSEGQLVDISGTSIGRGFAGYQKRHNFRRGPMGHGSKNHRAPGSTGAGTTPGRIYPGKRMAGQMGNVKKTIRKLTVVRVDAERNVLLIKGSVPGKPGALLNIQPATIVGES 212          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_THEEB (50S ribosomal protein L3 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplC PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.905e-54
Identity = 99/177 (55.93%), Postives = 133/177 (75.14%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQ+KT  TDGY A+Q+ Y  VR+K L++PE GHL KS   PMRHL+EFRL+ +  ++ GQ +  + IF+ G LVDV GT+IG+GF G  KRHNF+RG M HGSK+HR  GS GAGTTPGRV+ GK+M GRMG T   I KL+++++D +  +++IKGA+PGKPG L+ + PAK+VG+
Sbjct:   36 TQIKTPQTDGYTAIQVAYGEVREKNLSRPERGHLNKSQTPPMRHLREFRLEDVSAYQLGQAITVD-IFSPGQLVDVRGTSIGRGFAGYQKRHNFKRGPMAHGSKNHRLPGSTGAGTTPGRVFPGKRMAGRMGNTAVTIRKLQVMRVDPERNLILIKGALPGKPGALVSITPAKVVGR 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CYAA5 (50S ribosomal protein L3 OS=Cyanothece sp. (strain ATCC 51142) GN=rplC PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 3.250e-54
Identity = 101/177 (57.06%), Postives = 132/177 (74.58%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQ+KT  TDGY A+QIGY  V++K LTKPELGHL+K    P+RHL+E+R+     +  G+ +   +IFN GDLVD++GT++G+GF G  KRHNF+RG+MTHGSK+HR  GS GAGTTPGRVY GKKM G+ G        L++V++D +  +++IKGAVPGKPG LL + PAKIVGK
Sbjct:   37 TQIKTAETDGYSAIQIGYLEVKEKALTKPELGHLKKVEASPLRHLKEYRVDDTATYTLGEAVK-ADIFNAGDLVDIAGTSMGRGFAGYQKRHNFKRGSMTHGSKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVKTTTRHLQVVRVDAERNLLLIKGAVPGKPGGLLNITPAKIVGK 212          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CYAP8 (50S ribosomal protein L3 OS=Cyanothece sp. (strain PCC 8801) GN=rplC PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.235e-53
Identity = 100/177 (56.50%), Postives = 130/177 (73.45%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQVKT  TDGY A+Q+GY  V++K LTK E+GHL+K    P+RHL+E+RL     ++ G  +   +IFN GDLVDVSG ++G+GF G  KRHNF+RG MTHGSK+HR  GS GAGTTPGRVY GK+M G+ G T   I  L +V++D+D  ++++KGA+PGKPG LL + PAK VGK
Sbjct:   37 TQVKTPDTDGYTAIQVGYHEVKEKALTKAEIGHLKKIDAPPLRHLKEYRLDDSSQYQLGDAIK-ADIFNPGDLVDVSGKSMGRGFAGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGQYGATQVTIRHLTVVRVDSDRNLILVKGAIPGKPGTLLNITPAKTVGK 212          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNP6 (50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplC PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.045e-52
Identity = 101/177 (57.06%), Postives = 128/177 (72.32%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQ+KT ATDGY+A+QIG+  VR+K+L+KPELGHL K+G  P+RHL E+R+ S DG E GQ L  +  F  G  VDV G TIG+GF G  KRH F RG M+HGSK+HR  GS GAGTTPGRVY GK+M GR G     I  L +V++D D  ++++KG+VPGKPG LL + PA +VG+
Sbjct:   36 TQIKTVATDGYNAIQIGFLEVREKQLSKPELGHLSKAGAPPLRHLLEYRVPSTDGLELGQALTADR-FEAGQKVDVQGHTIGRGFTGYQKRHGFARGPMSHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRSGNDKTTIRGLTVVRVDADRNLLLVKGSVPGKPGALLNITPATVVGQ 211          
The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RK3_TOBAC6.931e-8981.6850S ribosomal protein L3, chloroplastic (Fragment)... [more]
RK3A_ARATH2.087e-8580.1050S ribosomal protein L3-1, chloroplastic OS=Arabi... [more]
RL3_SYNP23.140e-5759.3250S ribosomal protein L3 OS=Synechococcus sp. (str... [more]
RL3_CYAP73.140e-5760.4550S ribosomal protein L3 OS=Cyanothece sp. (strain... [more]
RL3_MICAN9.136e-5759.3250S ribosomal protein L3 OS=Microcystis aeruginosa... [more]
RL3_ACAM11.193e-5658.4350S ribosomal protein L3 OS=Acaryochloris marina (... [more]
RL3_THEEB1.905e-5455.9350S ribosomal protein L3 OS=Thermosynechococcus el... [more]
RL3_CYAA53.250e-5457.0650S ribosomal protein L3 OS=Cyanothece sp. (strain... [more]
RL3_CYAP81.235e-5356.5050S ribosomal protein L3 OS=Cyanothece sp. (strain... [more]
RL3_SYNP61.045e-5257.0650S ribosomal protein L3 OS=Synechococcus sp. (str... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-016-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGTGTCGTACTTCGCGCCCGACGGAACTGTTGTTCCGGTGA
CTGTAGTTGGGTTCAGAGAAGGGAATATTGTGCACCCAAGTTAAGACTGA
AGCCACTGACGGGTACGACGCCGTTCAGATTGGTTATAGGAGAGTAAGGG
ACAAGAAGCTGACGAAACCTGAGCTGGGTCACTTGCAAAAGTCTGGGTTA
ATACCCATGAGGCATTTGCAGGAGTTTAGGTTACAGTCTATTGATGGGTT
TGAGGCTGGCCAAAAGTTGGCTTTTGAAGAGATTTTTAATGAAGGGGATC
TTGTCGATGTTTCTGGGACTACTATTGGCAAGGGTTTTCAAGGTGGCATT
AAGCGGCACAATTTCAGAAGGGGTGCGATGACCCATGGTTCTAAGAGTCA
TAGACAATTGGGTTCCATTGGTGCTGGAACAACTCCGGGCCGTGTATACA
AGGGGAAGAAGATGCCTGGAAGAATGGGAGGGACAACAAGGAAGATCTGA
AAGCTCGAGATTGTAAAAATTGATAATGACCTTCGTGTTGTAATGATAAA
AGGGGCTGTCCCTGGTAAGCCCGGAAATCTTCTGCGTGTAGCACCAGCTA
AGATTGTTGGGAAGAACATACCAAATAACTAGGTTGGTGCATTATTCTGA
TTGCTTCGCTTTGTGCAGTTCTACATTGGCAAAGAGATTAGTCTTTGTAA
ACCCTTCGTTTTGTGAGTGGAATTTAGACTTTCAGTTAACATCTTGTGAT
GTATCATTGGCTCCTTTGCCAGATACATTTCTATCTCTCTTAGGATTTTG
AATTAAGATTGCCTTCAGCGGAGAAAACCCATATTAATCTTACAAGGGCA
TACACTTTGCCAAAAAACTTTCTTGAGAGAACTCCGCAATTGGGATTTGT
GTCAAACCAA
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