EY757014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3_THAPS (50S ribosomal protein L3, chloroplastic OS=Thalassiosira pseudonana GN=rpl3 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.147e-49 Identity = 96/173 (55.49%), Postives = 126/173 (72.83%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAK 602 TQVKT DGY+A+Q+GY V K LT+P+LGHLQKS + P+++L+EF + F GQ L E F G L++V+G +IGKGF G KR+NF RG MTHGSK+HR GSIG GT+PGRV GKKM G++G T I KL+IV+++ND ++++KGAVPGKPGNLL + P+K Sbjct: 36 TQVKTTLNDGYNAIQVGYGNVSTKALTQPQLGHLQKSNIQPLKYLKEFHVSDPTEFNVGQILNVES-FVAGQLINVTGKSIGKGFSGLQKRYNFARGPMTHGSKNHRAPGSIGMGTSPGRVLPGKKMAGQLGNKTANIKKLKIVQVNNDENILVVKGAVPGKPGNLLSIIPSK 207
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3_PHATR (50S ribosomal protein L3, chloroplastic OS=Phaeodactylum tricornutum GN=rpl3 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.147e-49 Identity = 95/172 (55.23%), Postives = 126/172 (73.26%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQVK ++ DGYD++QIGY V K LT+PELGHLQKS + P+++L+EFR+ F+ GQ L + F G LV++ G +IGKGF G KRHNF RG MTHGSK+HR GSIG GTTPGRV GKKM G++G I KL+I++I+++ +++IKG+VPGKPGNLL + P+ Sbjct: 36 TQVKNQSKDGYDSIQIGYGNVLSKALTQPELGHLQKSNIQPLKYLKEFRINQETEFQIGQVLNVDS-FTPGQLVNIQGKSIGKGFSGLQKRHNFTRGPMTHGSKNHRAPGSIGMGTTPGRVLPGKKMSGQLGNKITTIKKLKIIQINSEENILVIKGSVPGKPGNLLSIVPS 206
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROMT (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain NATL2A) GN=rplC PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 5.369e-49 Identity = 96/176 (54.55%), Postives = 128/176 (72.73%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQ+K+ TDGY AVQIG++ +R+K + KP GHL KSG +RHL+E+R+++ FE G + ++ F +G VD+SG T+G+GF G KRH F RG M+HGSK+HR GSIGAGTTPGRVY GK+M GRMGG LEI+KID + ++++KG+VPGKPG+LL + PAK VG Sbjct: 36 TQLKSADTDGYAAVQIGFQLIREKLINKPSKGHLAKSGNDLLRHLREYRVENSSEFELGASITVDD-FEKGQKVDISGDTMGRGFAGYQKRHGFSRGPMSHGSKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEILKIDTNHNLLVVKGSVPGKPGSLLNIRPAKRVG 210
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNJA (50S ribosomal protein L3 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplC PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 7.012e-49 Identity = 95/177 (53.67%), Postives = 133/177 (75.14%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPM-RHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQ+KT+ATDGY+AVQ+GY +K LT+ + GHL K+G+ + RHL+EFR+ + ++ GQK+ E IF+ G L+DV+GT+IG+GF G KRH+F RG M+HGSK+HR+ GS+GAGTTPGRV+ G +M GRMGG I KL++V++D + +++IKG+VPG G LL + PAK VG Sbjct: 36 TQIKTQATDGYNAVQLGYWPTAEKHLTRAQRGHLSKAGVTELLRHLREFRVDQPEAYQLGQKITVE-IFSPGQLLDVAGTSIGRGFAGYQKRHHFGRGPMSHGSKNHRRPGSVGAGTTPGRVFPGLRMAGRMGGCRVTIRKLQLVQVDPERNLLIIKGSVPGVEGGLLEITPAKQVG 211
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNS9 (50S ribosomal protein L3 OS=Synechococcus sp. (strain CC9902) GN=rplC PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.196e-48 Identity = 96/176 (54.55%), Postives = 123/176 (69.89%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQ+K + TDGY AVQIG+ R+K + KP GHL KSG +RHL+E+R+ ++DG E G + + F G VDVSG T+G+GF G KRH F RG MTHGSK+HRQ GSIGAGTTPGR+Y GK+M GR GG L I++ID+D ++++KG+VPGKPG LL + PA VG Sbjct: 36 TQLKNDDTDGYAAVQIGFGETREKLINKPSKGHLTKSGEDLLRHLREYRVDNVDGLELGGSITVSD-FEAGQKVDVSGDTMGRGFAGLQKRHGFSRGPMTHGSKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTILRIDSDRNLLVVKGSVPGKPGALLNIKPAVRVG 210
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNR3 (50S ribosomal protein L3 OS=Synechococcus sp. (strain RCC307) GN=rplC PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 2.040e-48 Identity = 94/176 (53.41%), Postives = 124/176 (70.45%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQVKT DGY AVQ+G+ VR+K + +P GHL+KSG +RHL+E+R+ S DG E G + + F G VDVSG T+G+GF G KRH F RG MTHGSK+HR+ GS GAGTTPGR+Y GK+M GR GGT + L ++K+D++ ++++KG+VPGKPG LL + PA VG Sbjct: 36 TQVKTPTNDGYSAVQVGFGDVREKLVNQPAKGHLKKSGEDLLRHLKEYRVDSTDGVELGSSVTVDA-FEPGQKVDVSGDTMGRGFSGYQKRHGFSRGPMTHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGTKTTVKGLVVLKVDSERNLLVVKGSVPGKPGALLSIRPAVRVG 210
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNPW (50S ribosomal protein L3 OS=Synechococcus sp. (strain WH7803) GN=rplC PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.545e-48 Identity = 95/176 (53.98%), Postives = 120/176 (68.18%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQ+KT TDGY AVQIG+ RDK + KP GHL KSG +RHL E+R+ ++G E G + + F G VDVSG T+G+GF G KRH F RG MTHGSK+HR+ GS GAGTTPGR+Y GK+M GR GG L I+K+D+D ++++KG+VPGKPG LL + PA VG Sbjct: 36 TQLKTTETDGYSAVQIGFGETRDKLVNKPAKGHLAKSGEGVLRHLSEYRVDDVNGLELGGAVTVSD-FEAGQKVDVSGDTMGRGFAGYQKRHGFSRGPMTHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKTTTRGLTILKVDSDRNLLVVKGSVPGKPGALLNIRPANRVG 210
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3_RHDSA (50S ribosomal protein L3, chloroplastic OS=Rhodomonas salina GN=rpl3 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 7.752e-48 Identity = 89/176 (50.57%), Postives = 127/176 (72.16%), Query Frame = 3 Query: 78 LCTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKI 605 + TQ+KT+ +D Y A+QIG+ V++ L KP LGHL+KS ++HL+E+R++S++G E QK+ + F G V VSG TIGKGF G ++R++F RG MTHGSK+HR+ GSIG G+TPG+V+KGKKM GR+GG I LEIV ++ D ++++KGAVPGK GN+L + +I Sbjct: 34 ILTQIKTQESDSYQAIQIGFSEVKESSLNKPLLGHLKKSQAPALKHLKEYRVKSVEGLEVAQKITLDS-FEVGKTVSVSGKTIGKGFAGTVRRYSFTRGPMTHGSKNHREPGSIGQGSTPGKVHKGKKMAGRLGGKQSTIKNLEIVHVNTDNNILVVKGAVPGKKGNILSIQQEEI 208
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3_CYAPA (50S ribosomal protein L3, cyanelle OS=Cyanophora paradoxa GN=rpl3 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 7.752e-48 Identity = 92/175 (52.57%), Postives = 127/175 (72.57%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIV 608 TQ+KT ATDGY+A+Q+GYR ++K LTK +LGHLQK+ +R LQEF ++S D E + + E +FN+ D+V++ G +IG+GF G KRHNF RG M+HGSK+HR GSIGAG+TPGRVY G +M GR G + I L+IVK+D++ ++++KG+VPGKPG LL + K V Sbjct: 36 TQIKTTATDGYNAIQVGYRETKEKNLTKAQLGHLQKTNNSALRVLQEFSIESSDSIEVEKPITVE-LFNDNDIVNIQGYSIGRGFSGYQKRHNFARGPMSHGSKNHRLPGSIGAGSTPGRVYPGTRMAGRKGDSKITIRGLKIVKVDSERSLLIVKGSVPGKPGGLLTITQVKKV 209
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3_ODOSI (50S ribosomal protein L3, chloroplastic OS=Odontella sinensis GN=rpl3 PE=3 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 1.013e-47 Identity = 90/169 (53.25%), Postives = 126/169 (74.56%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRV 590 TQVKT+ DGY+A+QIGY V +K LT+PELGHLQKS + P+++L+EFR+ + + F+ GQ + E + + G +DV+G + GKGF G KRHNF RG MTHGSK+HR GSIG GTTPGRV GKKM G++G K KL+I++++ + ++++KG+VPGKPGNL+ + Sbjct: 36 TQVKTDLNDGYNAIQIGYGTVSNKSLTQPELGHLQKSNIQPLKYLKEFRVNNPEEFKVGQVVNVESL-STGQFIDVTGKSSGKGFSGLQKRHNFTRGPMTHGSKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKIIQVNGNENILVVKGSVPGKPGNLVTI 203 The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bpback to top |