EY757014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNPX (50S ribosomal protein L3 OS=Synechococcus sp. (strain WH8102) GN=rplC PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.322e-47 Identity = 94/176 (53.41%), Postives = 122/176 (69.32%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQ+K+ TDGY AVQIG+ R+K + KP GHL K+G +RHL+E+R+ +DGFE G + + F G VDVSG TIG+GF G KRH F RG MTHGSK+HR+ GSIG GTTPGR+Y GK+M GR GG L I+K+D++ ++++KG+VPGKPG LL + PA VG Sbjct: 36 TQLKSSDTDGYAAVQIGFGDTREKLINKPAKGHLNKTGETLLRHLREYRVDGLDGFELGGSITVGD-FEAGQKVDVSGDTIGRGFSGYQKRHGFSRGPMTHGSKNHREPGSIGPGTTPGRIYPGKRMAGRYGGKKITTRGLTILKVDSERNLLVVKGSVPGKPGALLNIRPALRVG 210
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNJB (50S ribosomal protein L3 OS=Synechococcus sp. GN=rplC PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.322e-47 Identity = 93/177 (52.54%), Postives = 131/177 (74.01%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPM-RHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQ+KT+ATDGY+A+Q+GY +K LT+ + GHL K+G+ + RHL+EFR+ + ++ GQK+ E +F+ G LVDV+GT+IG+GF G KRH+F RG M+HGSK+HR+ GSIGAGTTPGRV+ G +M GR+GG KL++V++D + +++IKG VPG G LL + PAK VG Sbjct: 36 TQIKTQATDGYNAIQLGYLPTAEKHLTRAQRGHLTKAGVTELLRHLREFRVDQPEAYQLGQKITVE-MFSPGQLVDVAGTSIGRGFAGYQKRHHFGRGPMSHGSKNHRRPGSIGAGTTPGRVFPGMRMAGRLGGGRVTTRKLQLVQVDPERDLLVIKGCVPGVEGGLLEITPAKQVG 211
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNS3 (50S ribosomal protein L3 OS=Synechococcus sp. (strain CC9311) GN=rplC PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.727e-47 Identity = 95/176 (53.98%), Postives = 123/176 (69.89%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQ+K+ TDGY AVQIG+ +R+K + KP GHL KSG +RHL E+R+ +DG + G + + F G VDVSG T+G+GF G KRH F RG MTHGSK+HRQ GSIGAGTTPGR+Y GK+M GR GG L I+KID++ ++++KG+VPGKPG+LL + PA VG Sbjct: 36 TQLKSSETDGYQAVQIGFGEIREKLINKPAKGHLAKSGEDLVRHLCEYRVDDLDGIQLGGAVTVGD-FAAGQKVDVSGDTMGRGFAGLQKRHGFSRGPMTHGSKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKITTRGLTILKIDSERNLLVVKGSVPGKPGSLLNIRPANRVG 210
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROMM (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplC PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.727e-47 Identity = 92/176 (52.27%), Postives = 123/176 (69.89%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQ+KT DGY AVQIG+ R+K + KP GHL KSG + ++HL+E+R++ ++G E G + F G VDVSG T+G+GF G KRH F RG M+HGSK+HR+ GS GAGTTPGR+Y GK+M GR GG R L I+K+D++ ++++KG+VPGKPG LL + PAK VG Sbjct: 36 TQLKTSEIDGYAAVQIGFGDTREKLINKPSKGHLTKSGEVLLKHLREYRVEGLEGLELGAAITVGS-FEAGQKVDVSGDTMGRGFAGYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTILKVDSNRNLLVVKGSVPGKPGALLNIRPAKRVG 210
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROMA (50S ribosomal protein L3 OS=Prochlorococcus marinus GN=rplC PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.727e-47 Identity = 93/178 (52.25%), Postives = 127/178 (71.35%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKN 617 TQ+K+ ATDGY AVQI + VR+K + KP GHL KSG +R++ E+R++ + F+ G ++ + F EG VDVSGT++G+GF G KRH F RG M+HGSK+HR+ GS GAGTTPGR+Y GK+M GR GG L I+K+D+D +++IKG++PGKPG+LL + PAK VG N Sbjct: 36 TQLKSSATDGYSAVQIAFGAVREKLINKPFQGHLAKSGDDLLRYMSEYRVKDVGEFQLGAQITVGD-FEEGQKVDVSGTSMGRGFSGYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLMIMKVDSDKNLLVIKGSLPGKPGSLLNIRPAKCVGLN 212
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROM3 (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT 9303) GN=rplC PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.727e-47 Identity = 92/176 (52.27%), Postives = 123/176 (69.89%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQ+KT DGY AVQIG+ R+K + KP GHL KSG + ++HL+E+R++ ++G E G + F G VDVSG T+G+GF G KRH F RG M+HGSK+HR+ GS GAGTTPGR+Y GK+M GR GG R L I+K+D++ ++++KG+VPGKPG LL + PAK VG Sbjct: 36 TQLKTSDIDGYAAVQIGFGDTREKLINKPSKGHLTKSGEVLLKHLREYRVEGLEGLELGAAITVGS-FEAGQKVDVSGDTMGRGFSGYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTILKVDSNRNLLVVKGSVPGKPGALLNIRPAKRVG 210
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_TRIEI (50S ribosomal protein L3 OS=Trichodesmium erythraeum (strain IMS101) GN=rplC PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.946e-47 Identity = 98/191 (51.31%), Postives = 127/191 (66.49%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKK--------------LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614 TQ+KTE TDGY AVQIGY ++K LT + GHL KSG P+R+L+E+R+ + FE GQ++ + +F G LVDV+G +IGKGF G KRHNFRRG M HGSK+HR GS G GTTPGRVY GKKM G +G KL+IV+ID + +++IKG++PGK G L+ +APA IVG+ Sbjct: 37 TQIKTEQTDGYTAVQIGYGEAKNKTRQLNTKEPKEVNRYLTNAQEGHLVKSGGTPLRYLREYRVDNTGNFELGQQIKVD-LFEAGQLVDVTGKSIGKGFAGYQKRHNFRRGPMAHGSKNHRLPGSTGPGTTPGRVYPGKKMAGHLGNVRVTTRKLKIVRIDPERNLLLIKGSIPGKSGTLISIAPANIVGQ 226
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNSC (50S ribosomal protein L3 OS=Synechococcus sp. (strain CC9605) GN=rplC PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.946e-47 Identity = 94/181 (51.93%), Postives = 123/181 (67.96%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKNIPN 626 TQ+K + TDGY AVQIG+ R+K + KP GHL KSG +RHL+E+R+ S++G E G + + F G VDVSG T+G+GF G KRH F RG MTHGSK+HR+ GS GAGTTPGR+Y GK+M GR GG L I+K+D++ ++++KG+VPGKPG LL + PA VG N Sbjct: 36 TQLKNDDTDGYSAVQIGFGETREKLINKPAQGHLNKSGEGLLRHLREYRVDSVEGLELGGAITVGD-FEAGQKVDVSGDTVGRGFAGYQKRHGFSRGPMTHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTILKVDSEHNLLVVKGSVPGKPGALLNIRPALRVGAKPAN 215
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROM4 (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT 9211) GN=rplC PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.119e-46 Identity = 95/176 (53.98%), Postives = 123/176 (69.89%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQ+K+ ATDGY AVQIGY R+K + KP GHL KSG +RHL E+R+ + +E G K+ F G VDVSG ++G+GF G KRH+F RG M+HGSK+HRQ GS GAGTTPGR+Y GK+M GR GG L I+KID+D ++++KG+VPGKPG+LL + PA+ VG Sbjct: 36 TQLKSLATDGYSAVQIGYGFTREKLVNKPFKGHLSKSGEGFLRHLHEYRVDDLGVYELGAKITVGN-FEAGQKVDVSGNSMGRGFAGYQKRHSFSRGPMSHGSKNHRQPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIMKIDSDRNLLVVKGSVPGKPGSLLNIRPAQRVG 210
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3_PAUCH (50S ribosomal protein L3, organellar chromatophore OS=Paulinella chromatophora GN=rpl3 PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 1.119e-46 Identity = 93/181 (51.38%), Postives = 122/181 (67.40%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKNIPN 626 TQ+K+ TDGY AVQ+GY R K + KP GHL +SG + HL+E+R+++IDG + G + E+ F G VDVSG ++G+GF G KRH F RG MTHGSK+HR+ GS GAGTTPGR+Y GK+M GR GG L IVK+D ++++KG+VPGKPG+LL + PAK V N Sbjct: 36 TQLKSIDTDGYTAVQLGYGETRQKLVNKPSKGHLARSGEQLLSHLREYRVETIDGLKLGNSITVED-FKAGQKVDVSGDSMGRGFSGYQKRHGFSRGPMTHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKQITTRGLVIVKVDTGHNLLVVKGSVPGKPGSLLNIFPAKGVNSKFAN 215 The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bpback to top |