EY757014

Overview
NameEY757014
Unique NameEY757014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNPX (50S ribosomal protein L3 OS=Synechococcus sp. (strain WH8102) GN=rplC PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.322e-47
Identity = 94/176 (53.41%), Postives = 122/176 (69.32%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611
            TQ+K+  TDGY AVQIG+   R+K + KP  GHL K+G   +RHL+E+R+  +DGFE G  +   + F  G  VDVSG TIG+GF G  KRH F RG MTHGSK+HR+ GSIG GTTPGR+Y GK+M GR GG       L I+K+D++  ++++KG+VPGKPG LL + PA  VG
Sbjct:   36 TQLKSSDTDGYAAVQIGFGDTREKLINKPAKGHLNKTGETLLRHLREYRVDGLDGFELGGSITVGD-FEAGQKVDVSGDTIGRGFSGYQKRHGFSRGPMTHGSKNHREPGSIGPGTTPGRIYPGKRMAGRYGGKKITTRGLTILKVDSERNLLVVKGSVPGKPGALLNIRPALRVG 210          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNJB (50S ribosomal protein L3 OS=Synechococcus sp. GN=rplC PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.322e-47
Identity = 93/177 (52.54%), Postives = 131/177 (74.01%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPM-RHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611
            TQ+KT+ATDGY+A+Q+GY    +K LT+ + GHL K+G+  + RHL+EFR+   + ++ GQK+  E +F+ G LVDV+GT+IG+GF G  KRH+F RG M+HGSK+HR+ GSIGAGTTPGRV+ G +M GR+GG      KL++V++D +  +++IKG VPG  G LL + PAK VG
Sbjct:   36 TQIKTQATDGYNAIQLGYLPTAEKHLTRAQRGHLTKAGVTELLRHLREFRVDQPEAYQLGQKITVE-MFSPGQLVDVAGTSIGRGFAGYQKRHHFGRGPMSHGSKNHRRPGSIGAGTTPGRVFPGMRMAGRLGGGRVTTRKLQLVQVDPERDLLVIKGCVPGVEGGLLEITPAKQVG 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNS3 (50S ribosomal protein L3 OS=Synechococcus sp. (strain CC9311) GN=rplC PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.727e-47
Identity = 95/176 (53.98%), Postives = 123/176 (69.89%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611
            TQ+K+  TDGY AVQIG+  +R+K + KP  GHL KSG   +RHL E+R+  +DG + G  +   + F  G  VDVSG T+G+GF G  KRH F RG MTHGSK+HRQ GSIGAGTTPGR+Y GK+M GR GG       L I+KID++  ++++KG+VPGKPG+LL + PA  VG
Sbjct:   36 TQLKSSETDGYQAVQIGFGEIREKLINKPAKGHLAKSGEDLVRHLCEYRVDDLDGIQLGGAVTVGD-FAAGQKVDVSGDTMGRGFAGLQKRHGFSRGPMTHGSKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKITTRGLTILKIDSERNLLVVKGSVPGKPGSLLNIRPANRVG 210          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROMM (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplC PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.727e-47
Identity = 92/176 (52.27%), Postives = 123/176 (69.89%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611
            TQ+KT   DGY AVQIG+   R+K + KP  GHL KSG + ++HL+E+R++ ++G E G  +     F  G  VDVSG T+G+GF G  KRH F RG M+HGSK+HR+ GS GAGTTPGR+Y GK+M GR GG  R    L I+K+D++  ++++KG+VPGKPG LL + PAK VG
Sbjct:   36 TQLKTSEIDGYAAVQIGFGDTREKLINKPSKGHLTKSGEVLLKHLREYRVEGLEGLELGAAITVGS-FEAGQKVDVSGDTMGRGFAGYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTILKVDSNRNLLVVKGSVPGKPGALLNIRPAKRVG 210          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROMA (50S ribosomal protein L3 OS=Prochlorococcus marinus GN=rplC PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.727e-47
Identity = 93/178 (52.25%), Postives = 127/178 (71.35%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKN 617
            TQ+K+ ATDGY AVQI +  VR+K + KP  GHL KSG   +R++ E+R++ +  F+ G ++   + F EG  VDVSGT++G+GF G  KRH F RG M+HGSK+HR+ GS GAGTTPGR+Y GK+M GR GG       L I+K+D+D  +++IKG++PGKPG+LL + PAK VG N
Sbjct:   36 TQLKSSATDGYSAVQIAFGAVREKLINKPFQGHLAKSGDDLLRYMSEYRVKDVGEFQLGAQITVGD-FEEGQKVDVSGTSMGRGFSGYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLMIMKVDSDKNLLVIKGSLPGKPGSLLNIRPAKCVGLN 212          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROM3 (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT 9303) GN=rplC PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.727e-47
Identity = 92/176 (52.27%), Postives = 123/176 (69.89%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611
            TQ+KT   DGY AVQIG+   R+K + KP  GHL KSG + ++HL+E+R++ ++G E G  +     F  G  VDVSG T+G+GF G  KRH F RG M+HGSK+HR+ GS GAGTTPGR+Y GK+M GR GG  R    L I+K+D++  ++++KG+VPGKPG LL + PAK VG
Sbjct:   36 TQLKTSDIDGYAAVQIGFGDTREKLINKPSKGHLTKSGEVLLKHLREYRVEGLEGLELGAAITVGS-FEAGQKVDVSGDTMGRGFSGYQKRHGFSRGPMSHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTILKVDSNRNLLVVKGSVPGKPGALLNIRPAKRVG 210          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_TRIEI (50S ribosomal protein L3 OS=Trichodesmium erythraeum (strain IMS101) GN=rplC PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.946e-47
Identity = 98/191 (51.31%), Postives = 127/191 (66.49%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKK--------------LTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQ+KTE TDGY AVQIGY   ++K               LT  + GHL KSG  P+R+L+E+R+ +   FE GQ++  + +F  G LVDV+G +IGKGF G  KRHNFRRG M HGSK+HR  GS G GTTPGRVY GKKM G +G       KL+IV+ID +  +++IKG++PGK G L+ +APA IVG+
Sbjct:   37 TQIKTEQTDGYTAVQIGYGEAKNKTRQLNTKEPKEVNRYLTNAQEGHLVKSGGTPLRYLREYRVDNTGNFELGQQIKVD-LFEAGQLVDVTGKSIGKGFAGYQKRHNFRRGPMAHGSKNHRLPGSTGPGTTPGRVYPGKKMAGHLGNVRVTTRKLKIVRIDPERNLLLIKGSIPGKSGTLISIAPANIVGQ 226          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SYNSC (50S ribosomal protein L3 OS=Synechococcus sp. (strain CC9605) GN=rplC PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.946e-47
Identity = 94/181 (51.93%), Postives = 123/181 (67.96%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKNIPN 626
            TQ+K + TDGY AVQIG+   R+K + KP  GHL KSG   +RHL+E+R+ S++G E G  +   + F  G  VDVSG T+G+GF G  KRH F RG MTHGSK+HR+ GS GAGTTPGR+Y GK+M GR GG       L I+K+D++  ++++KG+VPGKPG LL + PA  VG    N
Sbjct:   36 TQLKNDDTDGYSAVQIGFGETREKLINKPAQGHLNKSGEGLLRHLREYRVDSVEGLELGGAITVGD-FEAGQKVDVSGDTVGRGFAGYQKRHGFSRGPMTHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTILKVDSEHNLLVVKGSVPGKPGALLNIRPALRVGAKPAN 215          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROM4 (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT 9211) GN=rplC PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.119e-46
Identity = 95/176 (53.98%), Postives = 123/176 (69.89%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611
            TQ+K+ ATDGY AVQIGY   R+K + KP  GHL KSG   +RHL E+R+  +  +E G K+     F  G  VDVSG ++G+GF G  KRH+F RG M+HGSK+HRQ GS GAGTTPGR+Y GK+M GR GG       L I+KID+D  ++++KG+VPGKPG+LL + PA+ VG
Sbjct:   36 TQLKSLATDGYSAVQIGYGFTREKLVNKPFKGHLSKSGEGFLRHLHEYRVDDLGVYELGAKITVGN-FEAGQKVDVSGNSMGRGFAGYQKRHSFSRGPMSHGSKNHRQPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIMKIDSDRNLLVVKGSVPGKPGSLLNIRPAQRVG 210          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3_PAUCH (50S ribosomal protein L3, organellar chromatophore OS=Paulinella chromatophora GN=rpl3 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.119e-46
Identity = 93/181 (51.38%), Postives = 122/181 (67.40%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKNIPN 626
            TQ+K+  TDGY AVQ+GY   R K + KP  GHL +SG   + HL+E+R+++IDG + G  +  E+ F  G  VDVSG ++G+GF G  KRH F RG MTHGSK+HR+ GS GAGTTPGR+Y GK+M GR GG       L IVK+D    ++++KG+VPGKPG+LL + PAK V     N
Sbjct:   36 TQLKSIDTDGYTAVQLGYGETRQKLVNKPSKGHLARSGEQLLSHLREYRVETIDGLKLGNSITVED-FKAGQKVDVSGDSMGRGFSGYQKRHGFSRGPMTHGSKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKQITTRGLVIVKVDTGHNLLVVKGSVPGKPGSLLNIFPAKGVNSKFAN 215          
The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL3_SYNPX1.322e-4753.4150S ribosomal protein L3 OS=Synechococcus sp. (str... [more]
RL3_SYNJB1.322e-4752.5450S ribosomal protein L3 OS=Synechococcus sp. GN=r... [more]
RL3_SYNS31.727e-4753.9850S ribosomal protein L3 OS=Synechococcus sp. (str... [more]
RL3_PROMM1.727e-4752.2750S ribosomal protein L3 OS=Prochlorococcus marinu... [more]
RL3_PROMA1.727e-4752.2550S ribosomal protein L3 OS=Prochlorococcus marinu... [more]
RL3_PROM31.727e-4752.2750S ribosomal protein L3 OS=Prochlorococcus marinu... [more]
RL3_TRIEI2.946e-4751.3150S ribosomal protein L3 OS=Trichodesmium erythrae... [more]
RL3_SYNSC2.946e-4751.9350S ribosomal protein L3 OS=Synechococcus sp. (str... [more]
RL3_PROM41.119e-4653.9850S ribosomal protein L3 OS=Prochlorococcus marinu... [more]
RK3_PAUCH1.119e-4651.3850S ribosomal protein L3, organellar chromatophore... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-016-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGTGTCGTACTTCGCGCCCGACGGAACTGTTGTTCCGGTGA
CTGTAGTTGGGTTCAGAGAAGGGAATATTGTGCACCCAAGTTAAGACTGA
AGCCACTGACGGGTACGACGCCGTTCAGATTGGTTATAGGAGAGTAAGGG
ACAAGAAGCTGACGAAACCTGAGCTGGGTCACTTGCAAAAGTCTGGGTTA
ATACCCATGAGGCATTTGCAGGAGTTTAGGTTACAGTCTATTGATGGGTT
TGAGGCTGGCCAAAAGTTGGCTTTTGAAGAGATTTTTAATGAAGGGGATC
TTGTCGATGTTTCTGGGACTACTATTGGCAAGGGTTTTCAAGGTGGCATT
AAGCGGCACAATTTCAGAAGGGGTGCGATGACCCATGGTTCTAAGAGTCA
TAGACAATTGGGTTCCATTGGTGCTGGAACAACTCCGGGCCGTGTATACA
AGGGGAAGAAGATGCCTGGAAGAATGGGAGGGACAACAAGGAAGATCTGA
AAGCTCGAGATTGTAAAAATTGATAATGACCTTCGTGTTGTAATGATAAA
AGGGGCTGTCCCTGGTAAGCCCGGAAATCTTCTGCGTGTAGCACCAGCTA
AGATTGTTGGGAAGAACATACCAAATAACTAGGTTGGTGCATTATTCTGA
TTGCTTCGCTTTGTGCAGTTCTACATTGGCAAAGAGATTAGTCTTTGTAA
ACCCTTCGTTTTGTGAGTGGAATTTAGACTTTCAGTTAACATCTTGTGAT
GTATCATTGGCTCCTTTGCCAGATACATTTCTATCTCTCTTAGGATTTTG
AATTAAGATTGCCTTCAGCGGAGAAAACCCATATTAATCTTACAAGGGCA
TACACTTTGCCAAAAAACTTTCTTGAGAGAACTCCGCAATTGGGATTTGT
GTCAAACCAA
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