EY757014

Overview
NameEY757014
Unique NameEY757014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3_PORYE (50S ribosomal protein L3, chloroplastic OS=Porphyra yezoensis GN=rpl3 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.556e-46
Identity = 87/170 (51.18%), Postives = 128/170 (75.29%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVA 593
            TQ+K  +TDGY+A+Q+GY++V ++KL KP LGHL+KS   P+++L+E+ ++S D FE  Q L+  ++F  G  ++VS  ++GKGF G  KRH+F RG M+HGSK+HRQ GSIGAGTTPGRVY GK M G++G     I  L+IV I+++  ++++KGAVPGKPG L++++
Sbjct:   36 TQIKAVSTDGYNAIQVGYKQVAEQKLNKPLLGHLKKSQAPPLKYLREYEMKSTDDFEVSQILS-TDLFQVGQKINVSSRSVGKGFSGYQKRHHFSRGPMSHGSKNHRQPGSIGAGTTPGRVYPGKNMAGQLGNKKVTIKNLQIVSINSENDLLIVKGAVPGKPGALVKIS 204          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_THETN (50S ribosomal protein L3 OS=Thermoanaerobacter tengcongensis GN=rplC PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.256e-46
Identity = 90/166 (54.22%), Postives = 121/166 (72.89%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLL 584
            Q KT   DGY+A+Q+G+  V +KKL KP LGH +K+G+ P R+L+EFRL  I G+E G ++  + IF  GD VDV+G + GKGF G IKR+  RRG M+HGSK HR++GS+GA T PGR +KGKKMPGRMG     I  LE+VK+D +L ++++KG+VPG  G+LL
Sbjct:   37 QKKTVEKDGYNAIQVGFGDVSEKKLNKPLLGHFKKAGVSPKRYLREFRLDDISGYEVGTEIKVD-IFKPGDRVDVTGISKGKGFAGVIKRYGARRGPMSHGSKYHRRVGSMGATTDPGRTFKGKKMPGRMGSDRVTIQNLEVVKVDPELNLLVVKGSVPGPKGSLL 201          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROM0 (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT 9301) GN=rplC PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.256e-46
Identity = 89/177 (50.28%), Postives = 123/177 (69.49%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQ+KT A DGY AVQIGY   +DK ++KPE GHL KSG   ++HL+E+R++    +E G ++  +  F  G  VD+SG ++G+GF G  KRH F RG M+HGSK+HR  GS GAGTTPGR+Y GK+M GR GG       L ++KID+   ++++KG+VPGKPG+++ + P  IVGK
Sbjct:   36 TQLKTTALDGYTAVQIGYGLSKDKHISKPEKGHLLKSGEELLKHLKEYRVEETSSYEIGNQITVKN-FEVGQKVDISGKSMGRGFAGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVLKIDDQKNLLVVKGSVPGKPGSIINIKPNNIVGK 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROMP (50S ribosomal protein L3 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rplC PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.477e-46
Identity = 88/176 (50.00%), Postives = 123/176 (69.89%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611
            TQ+KT+  DGY A+QIGY   +DK L+KPE GHL KSG I ++HL+E+R++    +E G+++     F  G  VD+SG ++G+GF G  KRH F RG M+HGSK+HR  GS GAGTTPGR+Y GK+M GR GG       L +VKID+   ++++KG+VPGKPG+++ + P  +VG
Sbjct:   36 TQLKTQPLDGYTAIQIGYGVSKDKHLSKPEKGHLLKSGEILLKHLKEYRVEENSSYEIGKEITVTN-FEVGQKVDISGKSMGRGFSGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVVKIDDQKNLLVVKGSVPGKPGSIVNIKPNNVVG 210          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROMS (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain AS9601) GN=rplC PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.238e-45
Identity = 88/177 (49.72%), Postives = 124/177 (70.06%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQ+KT A DGY AVQIGY   ++K L+KPE GHL KSG   ++HL+E+R++    +E G+++  +  F  G  VD+SG ++G+GF G  KRH F RG M+HGSK+HR  GS GAGTTPGR+Y GK+M GR GG       L ++KID+   ++++KG+VPGKPG+++ + P  +VGK
Sbjct:   36 TQLKTTALDGYTAVQIGYGLSKEKHLSKPEKGHLLKSGEELLKHLKEYRVEETSSYEIGKQITVKN-FEVGQKVDISGKSMGRGFAGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVLKIDDQKNLLVVKGSVPGKPGSIINIKPNNVVGK 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3_GUITH (50S ribosomal protein L3, chloroplastic OS=Guillardia theta GN=rpl3 PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.616e-45
Identity = 88/169 (52.07%), Postives = 121/169 (71.60%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRV 590
            T +K++  D Y+A+QIGY++V  KKLTKP+LGHLQ + L P++HL+E+++ +   F   Q+L    IF  G +V VSG +IGKGF G +KRHNF RG MTHGSK+HR+ GSIG G+TP +V+KGKKM GR+GG       L +V +D D  V+++KG VPGK GN+L +
Sbjct:   36 TNLKSDTKDNYNAIQIGYQQVDAKKLTKPQLGHLQVNNLPPLKHLKEYKVDATHTFTIAQQLDVS-IFELGQIVSVSGVSIGKGFAGTVKRHNFTRGPMTHGSKNHREPGSIGQGSTPAKVHKGKKMAGRLGGHQVTTKNLTVVHLDKDNNVLVLKGCVPGKRGNILSI 203          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROM9 (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplC PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.601e-45
Identity = 88/177 (49.72%), Postives = 121/177 (68.36%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQ+KT   DGY AVQIGY   +DK + KPE GHL KSG   ++HL+E+R++    +E G ++  +  F  G  VD+SG ++G+GF G  KRH F RG M+HGSK+HR  GS GAGTTPGR+Y GK+M GR GG       L ++KID+   +++IKG+VPGKPG+++ + P  +VGK
Sbjct:   36 TQLKTTTLDGYSAVQIGYGLSKDKHINKPEKGHLLKSGEELLKHLKEYRVEETTSYEIGNQITVKN-FEVGQKVDISGKSMGRGFAGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVLKIDDQKNLLVIKGSVPGKPGSIVNIKPNNVVGK 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROM2 (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplC PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.601e-45
Identity = 86/177 (48.59%), Postives = 123/177 (69.49%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQ+KT A DGY A+QIGY   ++K ++KPE GHL KSG   ++HL+E+R++    +E G ++  +  F  G  VD+SG ++G+GF G  KRH F RG M+HGSK+HR  GS GAGTTPGR+Y GK+M GR GG       L ++KID+   ++++KG+VPGKPG+++ + P  +VGK
Sbjct:   36 TQLKTNALDGYTAIQIGYGVSKEKHISKPEKGHLLKSGEELLKHLKEYRVEETSSYEIGNQITVKN-FEVGQKVDISGKSMGRGFSGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVLKIDDQKNLLVVKGSVPGKPGSIVNIKPNNVVGK 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PROM5 (50S ribosomal protein L3 OS=Prochlorococcus marinus (strain MIT 9515) GN=rplC PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 8.023e-45
Identity = 87/176 (49.43%), Postives = 122/176 (69.32%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611
            TQ+KT++ DGY A+QIGY   +DK L+KPE GHL KSG   ++HL+EF+++    +E G+++     F  G  VD+SG ++G+GF G  KRH F RG M+HGSK+HR  GS GAGTTPGR+Y GK+M GR GG       L +VKID+   ++++KG+VPGKPG+++ + P   VG
Sbjct:   36 TQLKTQSLDGYTAIQIGYGVSKDKHLSKPEKGHLLKSGKELLKHLKEFKVEENSSYEIGKEITVTN-FEVGQKVDISGKSMGRGFSGYQKRHGFSRGPMSHGSKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVVKIDDQKNLLVVKGSVPGKPGSIVNIRPNNTVG 210          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RK3_PORPU (50S ribosomal protein L3, chloroplastic OS=Porphyra purpurea GN=rpl3 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.048e-44
Identity = 90/170 (52.94%), Postives = 127/170 (74.71%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVA 593
            TQ+K+ +TDGY+A+Q+GY++V ++KL+KP LGHL+KS   P+++L+E+ ++SI+ FE  Q  +   IF  G  V+VS  +IGKGF G  KRH+F RG M+HGSK+HRQ GSIGAGTTPGRVY GK M G+MG     I  L+IV I+ +  ++++KGAVPGK G L++V+
Sbjct:   36 TQIKSMSTDGYNAIQVGYKQVVEQKLSKPLLGHLKKSQSPPLKYLREYLVESIEDFEVSQVFS-TNIFEVGQKVNVSSKSIGKGFSGYQKRHHFSRGPMSHGSKNHRQPGSIGAGTTPGRVYPGKNMAGQMGNKKVTIKNLQIVSINIENDLLLLKGAVPGKQGALVKVS 204          
The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RK3_PORYE5.556e-4651.1850S ribosomal protein L3, chloroplastic OS=Porphyr... [more]
RL3_THETN7.256e-4654.2250S ribosomal protein L3 OS=Thermoanaerobacter ten... [more]
RL3_PROM07.256e-4650.2850S ribosomal protein L3 OS=Prochlorococcus marinu... [more]
RL3_PROMP9.477e-4650.0050S ribosomal protein L3 OS=Prochlorococcus marinu... [more]
RL3_PROMS1.238e-4549.7250S ribosomal protein L3 OS=Prochlorococcus marinu... [more]
RK3_GUITH1.616e-4552.0750S ribosomal protein L3, chloroplastic OS=Guillar... [more]
RL3_PROM93.601e-4549.7250S ribosomal protein L3 OS=Prochlorococcus marinu... [more]
RL3_PROM23.601e-4548.5950S ribosomal protein L3 OS=Prochlorococcus marinu... [more]
RL3_PROM58.023e-4549.4350S ribosomal protein L3 OS=Prochlorococcus marinu... [more]
RK3_PORPU1.048e-4452.9450S ribosomal protein L3, chloroplastic OS=Porphyr... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-016-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGTGTCGTACTTCGCGCCCGACGGAACTGTTGTTCCGGTGA
CTGTAGTTGGGTTCAGAGAAGGGAATATTGTGCACCCAAGTTAAGACTGA
AGCCACTGACGGGTACGACGCCGTTCAGATTGGTTATAGGAGAGTAAGGG
ACAAGAAGCTGACGAAACCTGAGCTGGGTCACTTGCAAAAGTCTGGGTTA
ATACCCATGAGGCATTTGCAGGAGTTTAGGTTACAGTCTATTGATGGGTT
TGAGGCTGGCCAAAAGTTGGCTTTTGAAGAGATTTTTAATGAAGGGGATC
TTGTCGATGTTTCTGGGACTACTATTGGCAAGGGTTTTCAAGGTGGCATT
AAGCGGCACAATTTCAGAAGGGGTGCGATGACCCATGGTTCTAAGAGTCA
TAGACAATTGGGTTCCATTGGTGCTGGAACAACTCCGGGCCGTGTATACA
AGGGGAAGAAGATGCCTGGAAGAATGGGAGGGACAACAAGGAAGATCTGA
AAGCTCGAGATTGTAAAAATTGATAATGACCTTCGTGTTGTAATGATAAA
AGGGGCTGTCCCTGGTAAGCCCGGAAATCTTCTGCGTGTAGCACCAGCTA
AGATTGTTGGGAAGAACATACCAAATAACTAGGTTGGTGCATTATTCTGA
TTGCTTCGCTTTGTGCAGTTCTACATTGGCAAAGAGATTAGTCTTTGTAA
ACCCTTCGTTTTGTGAGTGGAATTTAGACTTTCAGTTAACATCTTGTGAT
GTATCATTGGCTCCTTTGCCAGATACATTTCTATCTCTCTTAGGATTTTG
AATTAAGATTGCCTTCAGCGGAGAAAACCCATATTAATCTTACAAGGGCA
TACACTTTGCCAAAAAACTTTCTTGAGAGAACTCCGCAATTGGGATTTGT
GTCAAACCAA
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