EY757014

Overview
NameEY757014
Unique NameEY757014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_THEFY (50S ribosomal protein L3 OS=Thermobifida fusca (strain YX) GN=rplC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33
Identity = 74/178 (41.57%), Postives = 106/178 (59.55%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGS-KSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            T+V+T  TDGY A+Q+GY  +  +K+ KP   +L+K  L P RH  E R      +  GQ++   ++F  G+ VDV+G T GKG+ G +KRH F     +HG+ + HR  GSIG   TPGRV+KG +M GRMG   R +  L +  +D +  ++++KGAVPG  G L+ V  A   GK
Sbjct:   40 TRVRTPETDGYSAIQLGYGHINPRKVNKPLGDYLRKHNLTPRRHYVEVRTSDASEYTVGQEIT-ADVFQPGEKVDVTGKTKGKGYAGVMKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNVRRTVQNLTVHSVDAEKGLLLVKGAVPGPNGGLVLVRTAVKGGK 216          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SHEPW (50S ribosomal protein L3 OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=rplC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33
Identity = 84/175 (48.00%), Postives = 107/175 (61.14%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDG--FEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            TQVKT  TDGY A+Q+     +  ++TKPE GH  K+G+   R L E RL   DG   E G +L  + IF +   VDV+G + GKGFQGGIKR NF    MTHG S +HR  GSIG   TPGRV+KGKKM G MG        L+IV++D +  ++++KGAVPG     L + PA
Sbjct:   36 TQVKTLDTDGYRALQVTTGTKKANRITKPEAGHFAKAGVEAGRGLWELRLADGDGEGIEVGAELNVD-IFADIAKVDVTGQSKGKGFQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDIVRVDAERNLLLVKGAVPGATNGDLIIKPA 209          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SALAR (50S ribosomal protein L3 OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=rplC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33
Identity = 80/173 (46.24%), Postives = 108/173 (62.43%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            TQVK  A DGY AVQ+     +  ++TKPE GH  K+G+   R L EFRL   + +  GQ ++ E +F +   VDV+GT+ GKGF G +KR NFR    THG S SHR  GSIG   TPG+V+KGKKM G+MG     +  L++V++D +  ++++KG VPG  G  L V PA
Sbjct:   35 TQVKDLANDGYRAVQVTTGVKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISVE-LFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGGVPGATGCDLIVKPA 206          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_RHOFD (50S ribosomal protein L3 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=rplC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33
Identity = 78/181 (43.09%), Postives = 109/181 (60.22%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQS--IDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKN 617
            TQVKT+  DGY A+Q+ +   +  ++TKP  GHL K+G+     ++EFRL +     ++AG  +    +F  G  VDV GTTIGKGF G IKRH+ +    +HG S+SH   GSIG    PGRV+ GK+M G +G  T     L++++ID   +++MIKGAVPG  G  + V PA  V  N
Sbjct:   40 TQVKTQENDGYVALQVTFGARKASRVTKPAAGHLAKAGVEAGEIIREFRLTADVAAQYKAGATVPVTAVFAVGQKVDVQGTTIGKGFAGTIKRHHMKSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDDTVTTQNLDVIRIDEARQLLMIKGAVPGSAGGFVTVRPAVKVKAN 220          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_MYCLE (50S ribosomal protein L3 OS=Mycobacterium leprae GN=rplC PE=3 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33
Identity = 77/176 (43.75%), Postives = 108/176 (61.36%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDG---FEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKS-HRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            T+++T   DGY AVQ+ Y  +  +K+ KP  G    +G+ P R+L E RL   D    +E GQ+L   EIF +   VDV+GT+ GKGF G +KRH FR    +HG+++ HR+ GSIG   TP RV+KG +M GRMG     +  L + K+D +  V++IKGAVPG+ G L+ V  A
Sbjct:   37 TRIRTLERDGYSAVQLAYGEISPRKVNKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELT-AEIFADATYVDVTGTSKGKGFSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLVHKVDTENGVLLIKGAVPGRTGGLVMVRSA 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_DESVM (50S ribosomal protein L3 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rplC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33
Identity = 79/169 (46.75%), Postives = 104/169 (61.54%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRV 590
            QV+   TDGYDAVQI +   ++K +TKP  GH  K+G    R+L+E RL++   FE GQ+L    +F  G+ V V+GT+IGKG+QG ++R NF     THG  K HR  GSIG  T PG V+KGKKM G  G     +  LEIV I  +  V+++KGAVPG    L+ V
Sbjct:   39 QVRNGETDGYDAVQIAFEEAKEKHVTKPARGHFAKAGKGLFRNLREIRLEAPAEFEVGQELTV-SLFAAGEKVKVTGTSIGKGYQGVMRRWNFAGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGKKMAGHWGDERVTVKNLEIVDIRAEDNVILVKGAVPGPKNGLVLV 206          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CELJU (50S ribosomal protein L3 OS=Cellvibrio japonicus (strain Ueda107) GN=rplC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33
Identity = 79/173 (45.66%), Postives = 104/173 (60.12%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            TQVKT  TDGY AVQI     R  ++TK E GH  K+ +   R + E R  S + FE G  L  E  F+ G  +DV+GT+ GKG+ G +KR NF     THG S+SHR  GS G   +PGRV+K KKM G MG     +  LEIV++D +  ++++KGA+PG PG  + V PA
Sbjct:   36 TQVKTADTDGYSAVQITVGERRASRVTKSEAGHFAKANVEAGRSVWELRNNSQEAFEVGASLTVEA-FSAGQFIDVTGTSKGKGYAGTVKRWNFGMQDATHGNSRSHRVPGSTGQCQSPGRVFKNKKMTGHMGAERVTVQNLEIVRVDAERNLLLVKGAIPGAPGGDVIVRPA 207          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_BORBZ (50S ribosomal protein L3 OS=Borrelia burgdorferi (strain ZS7) GN=rplC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33
Identity = 76/171 (44.44%), Postives = 106/171 (61.99%), Query Frame = 3
Query:   93 KTEATDGYDAVQIGYRRVRDKKLTKPELGHLQK-SGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAK 602
            KT   DGY A+  G   ++  K++KP  G  +    + P R++ E  L+ +DG++AG ++  + +F     VDV+GTT GKGFQG +KRHNF  G  +HGSK HR LG  G  TTP R +KG KM GRMGG  + I  LE+V ID + R +++KGAVPG  G+ + V  +K
Sbjct:   38 KTVDRDGYSALIAGSVDLKSSKVSKPIKGQYKSLKDIEPKRYVIE--LKGLDGYDAGDEIKVD-VFKSVKYVDVTGTTKGKGFQGAMKRHNFSGGPSSHGSKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLIDEEKRALLVKGAVPGAKGSFVVVKKSK 205          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SHEB9 (50S ribosomal protein L3 OS=Shewanella baltica (strain OS195) GN=rplC PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.394e-33
Identity = 83/176 (47.16%), Postives = 108/176 (61.36%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFE---EIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            TQVKT  TDGY A+Q+     +  ++TKPE GH  KSG+   R L E RL  +DG   G ++  E   +IF +   VDV+G + GKGFQGG+KR NFR   MTHG S SHR  GSIG   TPGRV+KGKKM G MG        L +V++D +  +++++GAVPG     L + PA
Sbjct:   36 TQVKTLETDGYRALQVTTGTKKANRITKPEAGHFAKSGVEAGRGLWEMRL--VDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKGFQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVVVRVDVERNLLLVRGAVPGATNGDLIIKPA 209          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SHEB8 (50S ribosomal protein L3 OS=Shewanella baltica (strain OS185) GN=rplC PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.394e-33
Identity = 83/176 (47.16%), Postives = 108/176 (61.36%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFE---EIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            TQVKT  TDGY A+Q+     +  ++TKPE GH  KSG+   R L E RL  +DG   G ++  E   +IF +   VDV+G + GKGFQGG+KR NFR   MTHG S SHR  GSIG   TPGRV+KGKKM G MG        L +V++D +  +++++GAVPG     L + PA
Sbjct:   36 TQVKTLETDGYRALQVTTGTKKANRITKPEAGHFAKSGVEAGRGLWEMRL--VDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKGFQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVVVRVDVERNLLLVRGAVPGATNGDLIIKPA 209          
The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL3_THEFY4.130e-3341.5750S ribosomal protein L3 OS=Thermobifida fusca (st... [more]
RL3_SHEPW4.130e-3348.0050S ribosomal protein L3 OS=Shewanella piezotolera... [more]
RL3_SALAR4.130e-3346.2450S ribosomal protein L3 OS=Salmonella arizonae (s... [more]
RL3_RHOFD4.130e-3343.0950S ribosomal protein L3 OS=Rhodoferax ferrireduce... [more]
RL3_MYCLE4.130e-3343.7550S ribosomal protein L3 OS=Mycobacterium leprae G... [more]
RL3_DESVM4.130e-3346.7550S ribosomal protein L3 OS=Desulfovibrio vulgaris... [more]
RL3_CELJU4.130e-3345.6650S ribosomal protein L3 OS=Cellvibrio japonicus (... [more]
RL3_BORBZ4.130e-3344.4450S ribosomal protein L3 OS=Borrelia burgdorferi (... [more]
RL3_SHEB95.394e-3347.1650S ribosomal protein L3 OS=Shewanella baltica (st... [more]
RL3_SHEB85.394e-3347.1650S ribosomal protein L3 OS=Shewanella baltica (st... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-016-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGTGTCGTACTTCGCGCCCGACGGAACTGTTGTTCCGGTGA
CTGTAGTTGGGTTCAGAGAAGGGAATATTGTGCACCCAAGTTAAGACTGA
AGCCACTGACGGGTACGACGCCGTTCAGATTGGTTATAGGAGAGTAAGGG
ACAAGAAGCTGACGAAACCTGAGCTGGGTCACTTGCAAAAGTCTGGGTTA
ATACCCATGAGGCATTTGCAGGAGTTTAGGTTACAGTCTATTGATGGGTT
TGAGGCTGGCCAAAAGTTGGCTTTTGAAGAGATTTTTAATGAAGGGGATC
TTGTCGATGTTTCTGGGACTACTATTGGCAAGGGTTTTCAAGGTGGCATT
AAGCGGCACAATTTCAGAAGGGGTGCGATGACCCATGGTTCTAAGAGTCA
TAGACAATTGGGTTCCATTGGTGCTGGAACAACTCCGGGCCGTGTATACA
AGGGGAAGAAGATGCCTGGAAGAATGGGAGGGACAACAAGGAAGATCTGA
AAGCTCGAGATTGTAAAAATTGATAATGACCTTCGTGTTGTAATGATAAA
AGGGGCTGTCCCTGGTAAGCCCGGAAATCTTCTGCGTGTAGCACCAGCTA
AGATTGTTGGGAAGAACATACCAAATAACTAGGTTGGTGCATTATTCTGA
TTGCTTCGCTTTGTGCAGTTCTACATTGGCAAAGAGATTAGTCTTTGTAA
ACCCTTCGTTTTGTGAGTGGAATTTAGACTTTCAGTTAACATCTTGTGAT
GTATCATTGGCTCCTTTGCCAGATACATTTCTATCTCTCTTAGGATTTTG
AATTAAGATTGCCTTCAGCGGAGAAAACCCATATTAATCTTACAAGGGCA
TACACTTTGCCAAAAAACTTTCTTGAGAGAACTCCGCAATTGGGATTTGT
GTCAAACCAA
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