EY757014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_THEFY (50S ribosomal protein L3 OS=Thermobifida fusca (strain YX) GN=rplC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33 Identity = 74/178 (41.57%), Postives = 106/178 (59.55%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGS-KSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614 T+V+T TDGY A+Q+GY + +K+ KP +L+K L P RH E R + GQ++ ++F G+ VDV+G T GKG+ G +KRH F +HG+ + HR GSIG TPGRV+KG +M GRMG R + L + +D + ++++KGAVPG G L+ V A GK Sbjct: 40 TRVRTPETDGYSAIQLGYGHINPRKVNKPLGDYLRKHNLTPRRHYVEVRTSDASEYTVGQEIT-ADVFQPGEKVDVTGKTKGKGYAGVMKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNVRRTVQNLTVHSVDAEKGLLLVKGAVPGPNGGLVLVRTAVKGGK 216
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SHEPW (50S ribosomal protein L3 OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=rplC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33 Identity = 84/175 (48.00%), Postives = 107/175 (61.14%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDG--FEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQVKT TDGY A+Q+ + ++TKPE GH K+G+ R L E RL DG E G +L + IF + VDV+G + GKGFQGGIKR NF MTHG S +HR GSIG TPGRV+KGKKM G MG L+IV++D + ++++KGAVPG L + PA Sbjct: 36 TQVKTLDTDGYRALQVTTGTKKANRITKPEAGHFAKAGVEAGRGLWELRLADGDGEGIEVGAELNVD-IFADIAKVDVTGQSKGKGFQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDIVRVDAERNLLLVKGAVPGATNGDLIIKPA 209
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SALAR (50S ribosomal protein L3 OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=rplC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33 Identity = 80/173 (46.24%), Postives = 108/173 (62.43%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQVK A DGY AVQ+ + ++TKPE GH K+G+ R L EFRL + + GQ ++ E +F + VDV+GT+ GKGF G +KR NFR THG S SHR GSIG TPG+V+KGKKM G+MG + L++V++D + ++++KG VPG G L V PA Sbjct: 35 TQVKDLANDGYRAVQVTTGVKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEYTVGQSISVE-LFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGGVPGATGCDLIVKPA 206
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_RHOFD (50S ribosomal protein L3 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=rplC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33 Identity = 78/181 (43.09%), Postives = 109/181 (60.22%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQS--IDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGKN 617 TQVKT+ DGY A+Q+ + + ++TKP GHL K+G+ ++EFRL + ++AG + +F G VDV GTTIGKGF G IKRH+ + +HG S+SH GSIG PGRV+ GK+M G +G T L++++ID +++MIKGAVPG G + V PA V N Sbjct: 40 TQVKTQENDGYVALQVTFGARKASRVTKPAAGHLAKAGVEAGEIIREFRLTADVAAQYKAGATVPVTAVFAVGQKVDVQGTTIGKGFAGTIKRHHMKSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDDTVTTQNLDVIRIDEARQLLMIKGAVPGSAGGFVTVRPAVKVKAN 220
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_MYCLE (50S ribosomal protein L3 OS=Mycobacterium leprae GN=rplC PE=3 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33 Identity = 77/176 (43.75%), Postives = 108/176 (61.36%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDG---FEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKS-HRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 T+++T DGY AVQ+ Y + +K+ KP G +G+ P R+L E RL D +E GQ+L EIF + VDV+GT+ GKGF G +KRH FR +HG+++ HR+ GSIG TP RV+KG +M GRMG + L + K+D + V++IKGAVPG+ G L+ V A Sbjct: 37 TRIRTLERDGYSAVQLAYGEISPRKVNKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELT-AEIFADATYVDVTGTSKGKGFSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLVHKVDTENGVLLIKGAVPGRTGGLVMVRSA 211
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_DESVM (50S ribosomal protein L3 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rplC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33 Identity = 79/169 (46.75%), Postives = 104/169 (61.54%), Query Frame = 3 Query: 87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRV 590 QV+ TDGYDAVQI + ++K +TKP GH K+G R+L+E RL++ FE GQ+L +F G+ V V+GT+IGKG+QG ++R NF THG K HR GSIG T PG V+KGKKM G G + LEIV I + V+++KGAVPG L+ V Sbjct: 39 QVRNGETDGYDAVQIAFEEAKEKHVTKPARGHFAKAGKGLFRNLREIRLEAPAEFEVGQELTV-SLFAAGEKVKVTGTSIGKGYQGVMRRWNFAGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGKKMAGHWGDERVTVKNLEIVDIRAEDNVILVKGAVPGPKNGLVLV 206
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CELJU (50S ribosomal protein L3 OS=Cellvibrio japonicus (strain Ueda107) GN=rplC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33 Identity = 79/173 (45.66%), Postives = 104/173 (60.12%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQVKT TDGY AVQI R ++TK E GH K+ + R + E R S + FE G L E F+ G +DV+GT+ GKG+ G +KR NF THG S+SHR GS G +PGRV+K KKM G MG + LEIV++D + ++++KGA+PG PG + V PA Sbjct: 36 TQVKTADTDGYSAVQITVGERRASRVTKSEAGHFAKANVEAGRSVWELRNNSQEAFEVGASLTVEA-FSAGQFIDVTGTSKGKGYAGTVKRWNFGMQDATHGNSRSHRVPGSTGQCQSPGRVFKNKKMTGHMGAERVTVQNLEIVRVDAERNLLLVKGAIPGAPGGDVIVRPA 207
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_BORBZ (50S ribosomal protein L3 OS=Borrelia burgdorferi (strain ZS7) GN=rplC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.130e-33 Identity = 76/171 (44.44%), Postives = 106/171 (61.99%), Query Frame = 3 Query: 93 KTEATDGYDAVQIGYRRVRDKKLTKPELGHLQK-SGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAK 602 KT DGY A+ G ++ K++KP G + + P R++ E L+ +DG++AG ++ + +F VDV+GTT GKGFQG +KRHNF G +HGSK HR LG G TTP R +KG KM GRMGG + I LE+V ID + R +++KGAVPG G+ + V +K Sbjct: 38 KTVDRDGYSALIAGSVDLKSSKVSKPIKGQYKSLKDIEPKRYVIE--LKGLDGYDAGDEIKVD-VFKSVKYVDVTGTTKGKGFQGAMKRHNFSGGPSSHGSKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVVLIDEEKRALLVKGAVPGAKGSFVVVKKSK 205
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SHEB9 (50S ribosomal protein L3 OS=Shewanella baltica (strain OS195) GN=rplC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.394e-33 Identity = 83/176 (47.16%), Postives = 108/176 (61.36%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFE---EIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQVKT TDGY A+Q+ + ++TKPE GH KSG+ R L E RL +DG G ++ E +IF + VDV+G + GKGFQGG+KR NFR MTHG S SHR GSIG TPGRV+KGKKM G MG L +V++D + +++++GAVPG L + PA Sbjct: 36 TQVKTLETDGYRALQVTTGTKKANRITKPEAGHFAKSGVEAGRGLWEMRL--VDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKGFQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVVVRVDVERNLLLVRGAVPGATNGDLIIKPA 209
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SHEB8 (50S ribosomal protein L3 OS=Shewanella baltica (strain OS185) GN=rplC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.394e-33 Identity = 83/176 (47.16%), Postives = 108/176 (61.36%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFE---EIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQVKT TDGY A+Q+ + ++TKPE GH KSG+ R L E RL +DG G ++ E +IF + VDV+G + GKGFQGG+KR NFR MTHG S SHR GSIG TPGRV+KGKKM G MG L +V++D + +++++GAVPG L + PA Sbjct: 36 TQVKTLETDGYRALQVTTGTKKANRITKPEAGHFAKSGVEAGRGLWEMRL--VDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKGFQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVVVRVDVERNLLLVRGAVPGATNGDLIIKPA 209 The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bpback to top |