EY757014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_VARPS (50S ribosomal protein L3 OS=Variovorax paradoxus (strain S110) GN=rplC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.044e-33 Identity = 72/175 (41.14%), Postives = 109/175 (62.29%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRL--QSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQ+K++ TDGY A+Q+ + + ++TKP+ GHL K+G+ ++EFR+ + +AG +A +F+ G VDV GT+IGKG+ G IKRHN +HG S+SH GSIG PGRV+ GK+M G +G T+ L++ +ID ++++IKGA+PG G + V PA Sbjct: 40 TQIKSQETDGYVALQVTFGSRKASRVTKPQAGHLAKAGVEAGEIIREFRVTADTAGQHKAGAVIAASSVFSVGQKVDVQGTSIGKGYAGTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDVFRIDEARQLLLIKGAIPGSKGGFVTVRPA 214
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_THERP (50S ribosomal protein L3 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=rplC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.044e-33 Identity = 80/170 (47.06%), Postives = 103/170 (60.59%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRV 590 TQVKT DGY AVQ+G+ K+ +P GHL+ SG P R+L+E R+ F+ GQ + IF G LVDV G G+GFQGG+KRH F G THG S HR GSIG T PGRV+KGK+M GRMG + L + ++D +V+++GAVPG P L+ V Sbjct: 36 TQVKTSDRDGYQAVQLGFGH--RKRQNRPMQGHLRASGASP-RYLKEVRVDDATRFQVGQVIDCT-IFQPGQLVDVIGWRKGRGFQGGVKRHGFAGGPKTHGQSDRHRAPGSIGPTTDPGRVHKGKRMAGRMGPVRVTVQNLRVERVDPQRNLVLVRGAVPGHPNGLVIV 201
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PSEMY (50S ribosomal protein L3 OS=Pseudomonas mendocina (strain ymp) GN=rplC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.044e-33 Identity = 82/173 (47.40%), Postives = 107/173 (61.85%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQ K E +DGY AVQ+ R +++K + GH K+ + R + EFRL+ D ++AG L EIF G LVDV+G + GKGF G IKR NFR THG S SHR GSIG TPGRV+KGKKM G MG + LE+V++D + ++++KGAVPG G + V PA Sbjct: 36 TQFKNEESDGYRAVQVTVGERRASRVSKAQAGHFAKANVAAGRTVMEFRLEEGD-YQAGD-LINAEIFQAGQLVDVTGQSKGKGFAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVVRVDAERNLLLVKGAVPGATGGDVIVRPA 206
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_NEIMF (50S ribosomal protein L3 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=rplC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.044e-33 Identity = 78/179 (43.58%), Postives = 114/179 (63.69%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRL--QSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQVK++ TDGY AVQ+ + + + ++ K E GH K+G+ R L EF L + + +AG ++ +F G LVDV+GT+ GKGF G IKRHNF +HG S+SHR GSIG PGRV+ GK+M G+ G T + KLE+V++D + +++++KGAVPG + + V P+ VG Sbjct: 36 TQVKSKDTDGYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS-MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVG 213
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_NEIMB (50S ribosomal protein L3 OS=Neisseria meningitidis serogroup B GN=rplC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.044e-33 Identity = 78/179 (43.58%), Postives = 114/179 (63.69%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRL--QSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQVK++ TDGY AVQ+ + + + ++ K E GH K+G+ R L EF L + + +AG ++ +F G LVDV+GT+ GKGF G IKRHNF +HG S+SHR GSIG PGRV+ GK+M G+ G T + KLE+V++D + +++++KGAVPG + + V P+ VG Sbjct: 36 TQVKSKDTDGYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS-MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVG 213
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_NEIMA (50S ribosomal protein L3 OS=Neisseria meningitidis serogroup A GN=rplC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.044e-33 Identity = 78/179 (43.58%), Postives = 114/179 (63.69%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRL--QSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQVK++ TDGY AVQ+ + + + ++ K E GH K+G+ R L EF L + + +AG ++ +F G LVDV+GT+ GKGF G IKRHNF +HG S+SHR GSIG PGRV+ GK+M G+ G T + KLE+V++D + +++++KGAVPG + + V P+ VG Sbjct: 36 TQVKSKDTDGYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS-MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVG 213
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_NEIG1 (50S ribosomal protein L3 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=rplC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.044e-33 Identity = 78/179 (43.58%), Postives = 114/179 (63.69%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRL--QSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVG 611 TQVK++ TDGY AVQ+ + + + ++ K E GH K+G+ R L EF L + + +AG ++ +F G LVDV+GT+ GKGF G IKRHNF +HG S+SHR GSIG PGRV+ GK+M G+ G T + KLE+V++D + +++++KGAVPG + + V P+ VG Sbjct: 36 TQVKSKDTDGYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS-MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVG 213
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CHLCV (50S ribosomal protein L3 OS=Chlamydophila caviae GN=rplC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.044e-33 Identity = 75/175 (42.86%), Postives = 108/175 (61.71%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVR------DKKLTKPELGHLQKSGLIPMRHLQEFRLQ--SIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLL 584 TQ+K ++TDGY+A+Q+G + +K++ KPELGHL+KSG L+E RL +I+ G + E + + VD+SG + GKGFQG +KR FR G THGS HR GSIG +TPGR + G K P MG + LE+VKID + +V+++KGA+PG G+++ Sbjct: 38 TQIKVDSTDGYNAIQMGANEINVPEKTLEKRMNKPELGHLKKSGSRVFGLLKEVRLSEDAINEVSLGNEFGLE-VLEDISSVDISGVSKGKGFQGVMKRFGFRGGPKTHGSGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNLEVVKIDLEKKVLLVKGAIPGPRGSVV 211
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_ACIAC (50S ribosomal protein L3 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=rplC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.044e-33 Identity = 71/175 (40.57%), Postives = 108/175 (61.71%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRL--QSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQVKT+ DGY A+Q+ + + ++TKPE GHL K+G+ ++EFR+ ++ + G + ++F+ G VDV GT+IGKG+ G IKRHN +HG S+SH GSIG PGRV+ GK+M G +G T L+++++D ++++IKGA+PG G + V PA Sbjct: 40 TQVKTQENDGYVALQVTFGSRKASRVTKPEAGHLAKAGVEAGEIIREFRVTAETAGKYATGAAVPVADVFSVGQKVDVQGTSIGKGYAGTIKRHNMASQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATTTTQNLDVIRVDEARQLLLIKGAIPGSKGGFVTVRPA 214
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_XYLFA (50S ribosomal protein L3 OS=Xylella fastidiosa GN=rplC PE=3 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 9.200e-33 Identity = 77/166 (46.39%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQS--IDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPG 575 Q+KT DGYDAVQ+ R + KPE GH K+ + R L EFR++ + + G ++ IF G VD+ G T GKGFQG IKRHNFR G THG S SHR GS+G TPGRV+ GKKM G MG + + LE+VKID + ++ ++GA+PG G Sbjct: 40 QIKTSDVDGYDAVQVTVGSRRSVLVNKPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLS-IFAVGQKVDIQGITKGKGFQGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVVKIDVERCLIAVRGAIPGASG 204 The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bpback to top |