EY757014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_METFK (50S ribosomal protein L3 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=rplC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.202e-32 Identity = 73/175 (41.71%), Postives = 107/175 (61.14%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQS--IDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQ+KT A+DGY ++Q+ Y R ++ K GH K+G+ ++EF + + + G ++ E +F G LVDV+GT++GKGF G IKRHNF +HG S+SH GSIG PGRV+ GK+MPG +G + LEIV++D + +++IKGAVPG G + V P+ Sbjct: 36 TQIKTAASDGYTSLQVAYGERRASRIGKALAGHYAKAGVSAGAGIKEFPVSDDVLANYSVGGQITVE-LFQPGQLVDVTGTSLGKGFSGAIKRHNFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKTTVQNLEIVRVDAERNLLLIKGAVPGSKGGDVVVRPS 209
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_LEPCP (50S ribosomal protein L3 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=rplC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.202e-32 Identity = 78/174 (44.83%), Postives = 105/174 (60.34%), Query Frame = 3 Query: 87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEA--GQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 Q+KT TDGY AVQ+ + + ++TKPE GHL K+G+ LQEFR+ + E G +L +F G VDV GTTIGKGF G IKRH+F +HG S+SH GSI PGRV+ GKKM G +G T L++V++D +++++KGAVPG G + V PA Sbjct: 44 QIKTVETDGYSAVQVAFGARKASRVTKPEAGHLAKAGVESGELLQEFRVSAEVAAECKPGSQLPIA-MFQAGQQVDVQGTTIGKGFAGTIKRHHFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHLGDDTVTTQNLDVVRVDEARQLLLVKGAVPGAKGGFVTVRPA 216
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_LACSS (50S ribosomal protein L3 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rplC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.202e-32 Identity = 72/171 (42.11%), Postives = 105/171 (61.40%), Query Frame = 3 Query: 87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 QVKT TDGY+A+Q+G+ R+ KP GH+ K+ P R ++EFR ++ +E G ++ + F GD+VDV+G T G GFQG IK+ RG M HGS+ HR+ GS+GA RV+KGK +PGRMG R + L +V D + V+++KG VPG +++ + A Sbjct: 38 QVKTNETDGYEAIQVGFEDKREVLSNKPAKGHVAKANTTPKRFIREFRDVALGDYEVGTEIKVDT-FAAGDVVDVTGVTKGHGFQGNIKKDGQSRGPMGHGSRYHRRPGSMGA--VINRVFKGKLLPGRMGNNQRTVQNLVVVSTDVEKNVILVKGNVPGAKNSMVTIKTA 205
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_GEOUR (50S ribosomal protein L3 OS=Geobacter uraniireducens (strain Rf4) GN=rplC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.202e-32 Identity = 70/168 (41.67%), Postives = 103/168 (61.31%), Query Frame = 3 Query: 87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRV 590 Q KT+ DGY A+Q+G+ K +GH + +G L+E R+ + D + G L+ EIF GDLVDV+GT+IGKGFQG +KR F+ G +HGS+ HR GSIG TP RV+K KKMPG++G + +L+IV++D ++++ GA+PG L+ + Sbjct: 37 QKKTKEKDGYSAIQVGFNSQEAAKANSAVVGHCKTAGSGVFSFLRELRVDNADQYSVGDVLS-AEIFAPGDLVDVTGTSIGKGFQGVMKRWGFKGGRASHGSRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKIVRVDAADNLILLNGAIPGSTNGLVLI 203
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CHLAB (50S ribosomal protein L3 OS=Chlamydophila abortus GN=rplC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.202e-32 Identity = 72/177 (40.68%), Postives = 108/177 (61.02%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVR------DKKLTKPELGHLQKSGLIPMRHLQEFRL--QSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRV 590 TQ+K ++TDGY+A+Q+G + K++ KP +GH +KSG R L+E RL ++++ G + E +F +DVSG + GKGFQG +KR FR G +HGS HR GSIG +TPGR + G K P MG + LE++KID + +V+++KGA+PG G+++ V Sbjct: 38 TQIKVDSTDGYNAIQMGANEINVPEKTLHKRVNKPSIGHFKKSGSRVFRELKEVRLSEEAVNEVSLGSEFGLE-VFESVSSIDVSGVSKGKGFQGVMKRFGFRGGPQSHGSGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNLEVIKIDLEKKVLLVKGAIPGPRGSVVVV 213
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_ACIC1 (50S ribosomal protein L3 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=rplC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.202e-32 Identity = 76/173 (43.93%), Postives = 106/173 (61.27%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGS-KSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQV+T DGY AVQ+GY V +++ KP GH + +G+ P R+L E R + GQ++ E IF G VDV+G + GKGF G +KRHNFR +HG+ + HR GSIGA TPGRV+KG +M GRMGG + L + + + +++++GAVPG G L+ V A Sbjct: 39 TQVRTPDRDGYSAVQLGYGAVDPRRVNKPLAGHFRAAGVTPRRYLAEVRTGDAAEYTVGQEVTVE-IFTPGQRVDVAGVSKGKGFAGLMKRHNFRGLPDSHGTERKHRSPGSIGACATPGRVFKGLRMAGRMGGRRVTVQNLAVQAVKPEENLLLLQGAVPGPNGGLVYVRTA 210
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_XYLFM (50S ribosomal protein L3 OS=Xylella fastidiosa (strain M12) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.569e-32 Identity = 75/166 (45.18%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQS--IDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPG 575 Q+KT DGYDA+Q+ R + KPE GH K+ + R L EFR++ + + G ++ IF G VD+ G T GKGFQG IKRHNFR G THG S SHR GS+G TPGRV+ GKKM G MG + + LE++KID + ++ ++GA+PG G Sbjct: 40 QIKTSDVDGYDAIQVTVGSRRSVLVNKPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLS-IFAVGQKVDIQGITKGKGFQGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVIKIDVERFLIAVRGAIPGASG 204
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SHEWM (50S ribosomal protein L3 OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.569e-32 Identity = 81/175 (46.29%), Postives = 107/175 (61.14%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDG--FEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQV+T TDGY A+Q+ + ++TKPE GH K+G+ R L E RL +G E G +L + IF + VDV+G + GKGFQGGIKR NF MTHG S +HR GSIG TPGRV+KGKKM G MG L++V++D + ++++KGAVPG L + PA Sbjct: 36 TQVRTLETDGYRALQVTTGTKKANRITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVD-IFADVAKVDVTGQSKGKGFQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDVVRVDAERNLLLVKGAVPGATNGNLIIKPA 209
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SHEDO (50S ribosomal protein L3 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.569e-32 Identity = 81/175 (46.29%), Postives = 106/175 (60.57%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDG--FEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599 TQVKT TDGY A+Q+ + ++TK E GH K G+ R L E RL +G E G +L + IF E VDV+G + GKGFQGG+KR NFR MTHG S +HR GSIG TPGRV+KGKKM G MG L +V++D++ +++++GAVPG L + PA Sbjct: 36 TQVKTLETDGYRALQVTTGTKKANRITKAEAGHFAKGGVEAGRGLWEMRLADGEGEGIEVGAELNVD-IFAETVKVDVTGQSKGKGFQGGVKRWNFRTQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAEQVTTQNLHVVRVDSERNLILVRGAVPGATNGDLIIKPA 209
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PARUW (50S ribosomal protein L3 OS=Protochlamydia amoebophila (strain UWE25) GN=rplC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.569e-32 Identity = 75/184 (40.76%), Postives = 109/184 (59.24%), Query Frame = 3 Query: 84 TQVKTEATDGYDAVQIGYRRVRDK-------KLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614 TQ+KT+ TDGY A+Q+G+ +V K + KP LGH +K+G+ R L E RL S + + GQ+++ + FN + VD + + GKG+QG +KRHNF G +HGS HR GS G +TPGR G K G+MG + L IVK+D++ V+++KG VPG L+ + AK + K Sbjct: 50 TQIKTKETDGYTALQLGFEKVTGKTQHTIEARTGKPRLGHFKKAGVESRRFLVESRLDSTEEYTLGQEISVDT-FNGIEFVDATAISKGKGYQGVMKRHNFAGGPASHGSGHHRHAGSTGMRSTPGRGLPGGKKAGQMGNERVTVQNLRIVKVDSENHVIVVKGQVPGPRNGLVYITQAKKLAK 232 The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bpback to top |