EY757014

Overview
NameEY757014
Unique NameEY757014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_METFK (50S ribosomal protein L3 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=rplC PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.202e-32
Identity = 73/175 (41.71%), Postives = 107/175 (61.14%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQS--IDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            TQ+KT A+DGY ++Q+ Y   R  ++ K   GH  K+G+     ++EF +    +  +  G ++  E +F  G LVDV+GT++GKGF G IKRHNF     +HG S+SH   GSIG    PGRV+ GK+MPG +G     +  LEIV++D +  +++IKGAVPG  G  + V P+
Sbjct:   36 TQIKTAASDGYTSLQVAYGERRASRIGKALAGHYAKAGVSAGAGIKEFPVSDDVLANYSVGGQITVE-LFQPGQLVDVTGTSLGKGFSGAIKRHNFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKTTVQNLEIVRVDAERNLLLIKGAVPGSKGGDVVVRPS 209          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_LEPCP (50S ribosomal protein L3 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=rplC PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.202e-32
Identity = 78/174 (44.83%), Postives = 105/174 (60.34%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEA--GQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            Q+KT  TDGY AVQ+ +   +  ++TKPE GHL K+G+     LQEFR+ +    E   G +L    +F  G  VDV GTTIGKGF G IKRH+F     +HG S+SH   GSI     PGRV+ GKKM G +G  T     L++V++D   +++++KGAVPG  G  + V PA
Sbjct:   44 QIKTVETDGYSAVQVAFGARKASRVTKPEAGHLAKAGVESGELLQEFRVSAEVAAECKPGSQLPIA-MFQAGQQVDVQGTTIGKGFAGTIKRHHFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHLGDDTVTTQNLDVVRVDEARQLLLVKGAVPGAKGGFVTVRPA 216          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_LACSS (50S ribosomal protein L3 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rplC PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.202e-32
Identity = 72/171 (42.11%), Postives = 105/171 (61.40%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            QVKT  TDGY+A+Q+G+   R+    KP  GH+ K+   P R ++EFR  ++  +E G ++  +  F  GD+VDV+G T G GFQG IK+    RG M HGS+ HR+ GS+GA     RV+KGK +PGRMG   R +  L +V  D +  V+++KG VPG   +++ +  A
Sbjct:   38 QVKTNETDGYEAIQVGFEDKREVLSNKPAKGHVAKANTTPKRFIREFRDVALGDYEVGTEIKVDT-FAAGDVVDVTGVTKGHGFQGNIKKDGQSRGPMGHGSRYHRRPGSMGA--VINRVFKGKLLPGRMGNNQRTVQNLVVVSTDVEKNVILVKGNVPGAKNSMVTIKTA 205          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_GEOUR (50S ribosomal protein L3 OS=Geobacter uraniireducens (strain Rf4) GN=rplC PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.202e-32
Identity = 70/168 (41.67%), Postives = 103/168 (61.31%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRV 590
            Q KT+  DGY A+Q+G+      K     +GH + +G      L+E R+ + D +  G  L+  EIF  GDLVDV+GT+IGKGFQG +KR  F+ G  +HGS+ HR  GSIG   TP RV+K KKMPG++G     + +L+IV++D    ++++ GA+PG    L+ +
Sbjct:   37 QKKTKEKDGYSAIQVGFNSQEAAKANSAVVGHCKTAGSGVFSFLRELRVDNADQYSVGDVLS-AEIFAPGDLVDVTGTSIGKGFQGVMKRWGFKGGRASHGSRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKIVRVDAADNLILLNGAIPGSTNGLVLI 203          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CHLAB (50S ribosomal protein L3 OS=Chlamydophila abortus GN=rplC PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.202e-32
Identity = 72/177 (40.68%), Postives = 108/177 (61.02%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVR------DKKLTKPELGHLQKSGLIPMRHLQEFRL--QSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRV 590
            TQ+K ++TDGY+A+Q+G   +        K++ KP +GH +KSG    R L+E RL  ++++    G +   E +F     +DVSG + GKGFQG +KR  FR G  +HGS  HR  GSIG  +TPGR + G K P  MG     +  LE++KID + +V+++KGA+PG  G+++ V
Sbjct:   38 TQIKVDSTDGYNAIQMGANEINVPEKTLHKRVNKPSIGHFKKSGSRVFRELKEVRLSEEAVNEVSLGSEFGLE-VFESVSSIDVSGVSKGKGFQGVMKRFGFRGGPQSHGSGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNLEVIKIDLEKKVLLVKGAIPGPRGSVVVV 213          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_ACIC1 (50S ribosomal protein L3 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=rplC PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.202e-32
Identity = 76/173 (43.93%), Postives = 106/173 (61.27%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGS-KSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            TQV+T   DGY AVQ+GY  V  +++ KP  GH + +G+ P R+L E R      +  GQ++  E IF  G  VDV+G + GKGF G +KRHNFR    +HG+ + HR  GSIGA  TPGRV+KG +M GRMGG    +  L +  +  +  +++++GAVPG  G L+ V  A
Sbjct:   39 TQVRTPDRDGYSAVQLGYGAVDPRRVNKPLAGHFRAAGVTPRRYLAEVRTGDAAEYTVGQEVTVE-IFTPGQRVDVAGVSKGKGFAGLMKRHNFRGLPDSHGTERKHRSPGSIGACATPGRVFKGLRMAGRMGGRRVTVQNLAVQAVKPEENLLLLQGAVPGPNGGLVYVRTA 210          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_XYLFM (50S ribosomal protein L3 OS=Xylella fastidiosa (strain M12) GN=rplC PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.569e-32
Identity = 75/166 (45.18%), Postives = 100/166 (60.24%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQS--IDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPG 575
            Q+KT   DGYDA+Q+     R   + KPE GH  K+ +   R L EFR++   +  +  G ++    IF  G  VD+ G T GKGFQG IKRHNFR G  THG S SHR  GS+G   TPGRV+ GKKM G MG   + +  LE++KID +  ++ ++GA+PG  G
Sbjct:   40 QIKTSDVDGYDAIQVTVGSRRSVLVNKPESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLS-IFAVGQKVDIQGITKGKGFQGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVIKIDVERFLIAVRGAIPGASG 204          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SHEWM (50S ribosomal protein L3 OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=rplC PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.569e-32
Identity = 81/175 (46.29%), Postives = 107/175 (61.14%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDG--FEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            TQV+T  TDGY A+Q+     +  ++TKPE GH  K+G+   R L E RL   +G   E G +L  + IF +   VDV+G + GKGFQGGIKR NF    MTHG S +HR  GSIG   TPGRV+KGKKM G MG        L++V++D +  ++++KGAVPG     L + PA
Sbjct:   36 TQVRTLETDGYRALQVTTGTKKANRITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVD-IFADVAKVDVTGQSKGKGFQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDVVRVDAERNLLLVKGAVPGATNGNLIIKPA 209          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_SHEDO (50S ribosomal protein L3 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rplC PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.569e-32
Identity = 81/175 (46.29%), Postives = 106/175 (60.57%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDG--FEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            TQVKT  TDGY A+Q+     +  ++TK E GH  K G+   R L E RL   +G   E G +L  + IF E   VDV+G + GKGFQGG+KR NFR   MTHG S +HR  GSIG   TPGRV+KGKKM G MG        L +V++D++  +++++GAVPG     L + PA
Sbjct:   36 TQVKTLETDGYRALQVTTGTKKANRITKAEAGHFAKGGVEAGRGLWEMRLADGEGEGIEVGAELNVD-IFAETVKVDVTGQSKGKGFQGGVKRWNFRTQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAEQVTTQNLHVVRVDSERNLILVRGAVPGATNGDLIIKPA 209          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PARUW (50S ribosomal protein L3 OS=Protochlamydia amoebophila (strain UWE25) GN=rplC PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.569e-32
Identity = 75/184 (40.76%), Postives = 109/184 (59.24%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDK-------KLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            TQ+KT+ TDGY A+Q+G+ +V  K       +  KP LGH +K+G+   R L E RL S + +  GQ+++ +  FN  + VD +  + GKG+QG +KRHNF  G  +HGS  HR  GS G  +TPGR   G K  G+MG     +  L IVK+D++  V+++KG VPG    L+ +  AK + K
Sbjct:   50 TQIKTKETDGYTALQLGFEKVTGKTQHTIEARTGKPRLGHFKKAGVESRRFLVESRLDSTEEYTLGQEISVDT-FNGIEFVDATAISKGKGYQGVMKRHNFAGGPASHGSGHHRHAGSTGMRSTPGRGLPGGKKAGQMGNERVTVQNLRIVKVDSENHVIVVKGQVPGPRNGLVYITQAKKLAK 232          
The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL3_METFK1.202e-3241.7150S ribosomal protein L3 OS=Methylobacillus flagel... [more]
RL3_LEPCP1.202e-3244.8350S ribosomal protein L3 OS=Leptothrix cholodnii (... [more]
RL3_LACSS1.202e-3242.1150S ribosomal protein L3 OS=Lactobacillus sakei su... [more]
RL3_GEOUR1.202e-3241.6750S ribosomal protein L3 OS=Geobacter uraniireduce... [more]
RL3_CHLAB1.202e-3240.6850S ribosomal protein L3 OS=Chlamydophila abortus ... [more]
RL3_ACIC11.202e-3243.9350S ribosomal protein L3 OS=Acidothermus celluloly... [more]
RL3_XYLFM1.569e-3245.1850S ribosomal protein L3 OS=Xylella fastidiosa (st... [more]
RL3_SHEWM1.569e-3246.2950S ribosomal protein L3 OS=Shewanella woodyi (str... [more]
RL3_SHEDO1.569e-3246.2950S ribosomal protein L3 OS=Shewanella denitrifica... [more]
RL3_PARUW1.569e-3240.7650S ribosomal protein L3 OS=Protochlamydia amoebop... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-016-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGTGTCGTACTTCGCGCCCGACGGAACTGTTGTTCCGGTGA
CTGTAGTTGGGTTCAGAGAAGGGAATATTGTGCACCCAAGTTAAGACTGA
AGCCACTGACGGGTACGACGCCGTTCAGATTGGTTATAGGAGAGTAAGGG
ACAAGAAGCTGACGAAACCTGAGCTGGGTCACTTGCAAAAGTCTGGGTTA
ATACCCATGAGGCATTTGCAGGAGTTTAGGTTACAGTCTATTGATGGGTT
TGAGGCTGGCCAAAAGTTGGCTTTTGAAGAGATTTTTAATGAAGGGGATC
TTGTCGATGTTTCTGGGACTACTATTGGCAAGGGTTTTCAAGGTGGCATT
AAGCGGCACAATTTCAGAAGGGGTGCGATGACCCATGGTTCTAAGAGTCA
TAGACAATTGGGTTCCATTGGTGCTGGAACAACTCCGGGCCGTGTATACA
AGGGGAAGAAGATGCCTGGAAGAATGGGAGGGACAACAAGGAAGATCTGA
AAGCTCGAGATTGTAAAAATTGATAATGACCTTCGTGTTGTAATGATAAA
AGGGGCTGTCCCTGGTAAGCCCGGAAATCTTCTGCGTGTAGCACCAGCTA
AGATTGTTGGGAAGAACATACCAAATAACTAGGTTGGTGCATTATTCTGA
TTGCTTCGCTTTGTGCAGTTCTACATTGGCAAAGAGATTAGTCTTTGTAA
ACCCTTCGTTTTGTGAGTGGAATTTAGACTTTCAGTTAACATCTTGTGAT
GTATCATTGGCTCCTTTGCCAGATACATTTCTATCTCTCTTAGGATTTTG
AATTAAGATTGCCTTCAGCGGAGAAAACCCATATTAATCTTACAAGGGCA
TACACTTTGCCAAAAAACTTTCTTGAGAGAACTCCGCAATTGGGATTTGT
GTCAAACCAA
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