EY757014

Overview
NameEY757014
Unique NameEY757014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CHLAA (50S ribosomal protein L3 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rplC PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.325e-39
Identity = 84/175 (48.00%), Postives = 115/175 (65.71%), Query Frame = 3
Query:   78 LCTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            + TQ++T   DGY AVQ+GY  V  +KLTKP+ GHL+ SG   +R+L+EF          G+ +  E +F  G  VD+SGT+ G+GF G +KRH FR G  THG S  HR  GSIGAGTTPGRV+KG++M GRMGGT   I  LE+V++  +  ++++KG+VPG    LL++  A
Sbjct:   34 IVTQIRTPERDGYSAVQLGYEEVEPRKLTKPQQGHLKASGGKMLRYLREFSADDPQAHTPGEVVTVE-LFRPGQKVDISGTSKGRGFAGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQRMAGRMGGTRVTIQNLEVVEVLPEQNLLLVKGSVPGARNGLLQIRKA 207          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_FERNB (50S ribosomal protein L3 OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=rplC PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.261e-39
Identity = 78/171 (45.61%), Postives = 114/171 (66.67%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            Q KT   DGY+A+Q+G+  V +KKLTKP LG  +K+ + PMR L+EFR++++D +  GQ++    IF EGD +D++G T G+G+ G +KR NF+ G   HG+K HR+LGS+G  T P R++KGK+MPGR G     I   E+V ID    ++ +KG VPG  G+L+ +  A
Sbjct:   35 QKKTVEKDGYNAIQLGFEEVNEKKLTKPMLGVFKKANVKPMRVLKEFRVENVDQYSVGQEITVA-IFQEGDKIDITGWTKGRGYSGAMKRWNFQGGPKAHGAKFHRELGSVGQHTEPARIFKGKRMPGRYGNERVTILNSEVVTIDAQNNLLAVKGGVPGARGSLVIIRSA 204          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_BACP2 (50S ribosomal protein L3 OS=Bacillus pumilus (strain SAFR-032) GN=rplC PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.261e-39
Identity = 85/171 (49.71%), Postives = 114/171 (66.67%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            Q KT  TDGY+A+QIG+   R+K   KPE GH+ K+   P R ++E R   +D +E GQ++  + IF  GD+VDV+GT+ GKGFQG IKRH   RG MTHGS+ HR+ GS+G    P RV+KGK +PGRMGG    +  LEIVK+D +  +++IKG VPG   +L+ V  A
Sbjct:   37 QKKTTDTDGYEAIQIGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGAELDAYEVGQEVKVD-IFANGDIVDVTGTSKGKGFQGAIKRHGQSRGPMTHGSRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIVKVDAERNLLLIKGNVPGAKKSLVTVKSA 205          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_LYSSC (50S ribosomal protein L3 OS=Lysinibacillus sphaericus (strain C3-41) GN=rplC PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.037e-39
Identity = 83/171 (48.54%), Postives = 113/171 (66.08%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            Q KT  TDGY+A+Q+G+   R K   KP+ GH+ K+   P R ++EFR  +++ +E GQ++  E IF EGD++DV+G T GKGFQG IKRH   RG M HGS+ HR+ GS+G    P RV+K KK+PG+MGG    I  LEIVK+D D  ++++KG VPG    L+ V  A
Sbjct:   37 QKKTVETDGYEAIQVGFEDKRVKLSNKPQQGHVAKANTAPKRFIREFRNVNVEEYEVGQEVKVE-IFAEGDVIDVTGVTKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGP-VAPNRVFKQKKLPGQMGGNVVTIQNLEIVKVDTDRNLLLVKGNVPGSKKALVTVKTA 205          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_COREF (50S ribosomal protein L3 OS=Corynebacterium efficiens GN=rplC PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.037e-39
Identity = 76/173 (43.93%), Postives = 114/173 (65.90%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKS-HRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            +Q++T  TDGY+A+QI Y  +  +K+ +P  GH +K+G+ P RH+ E R+  + G+E GQ +  E IFN+   VDV+GT+ GKG+ G +KRH F      HG+++ HR++G IGA  TPGR++KGK+M GRMG        L++ KID D  +++IKGA+PG  G ++ V  A
Sbjct:   40 SQIRTVETDGYNAIQIAYGEIDPRKVNQPLTGHFKKAGVTPRRHVTEIRMDDVSGYEVGQDVTVE-IFNDVKFVDVTGTSKGKGYAGAMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGNDRVTTQNLKVQKIDADANLILIKGAIPGNRGGIVTVKTA 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_BIFLO (50S ribosomal protein L3 OS=Bifidobacterium longum GN=rplC PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.037e-39
Identity = 87/173 (50.29%), Postives = 111/173 (64.16%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGS-KSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            T VKTE +DGY AVQ+GY  +   K+TKP  GH  K+G+ P RHL E R   +D FEAGQ+LA  ++F EG  VDV+GTT GKGF G IKR  F+    THGS K+ R+ GS+GA  TP R+ KGK+M GRMG  T     L +V  D +  ++ IKGA+PG  G ++ V  A
Sbjct:   38 TAVKTEESDGYKAVQLGYGAIDPTKVTKPLAGHFAKAGVTPRRHLVEVRTDDVDQFEAGQELA-ADLFEEGAEVDVTGTTKGKGFAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVSADVENGILAIKGAIPGPKGGIVLVRSA 209          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_BIFLD (50S ribosomal protein L3 OS=Bifidobacterium longum (strain DJO10A) GN=rplC PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 5.037e-39
Identity = 87/173 (50.29%), Postives = 111/173 (64.16%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGS-KSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            T VKTE +DGY AVQ+GY  +   K+TKP  GH  K+G+ P RHL E R   +D FEAGQ+LA  ++F EG  VDV+GTT GKGF G IKR  F+    THGS K+ R+ GS+GA  TP R+ KGK+M GRMG  T     L +V  D +  ++ IKGA+PG  G ++ V  A
Sbjct:   38 TAVKTEESDGYKAVQLGYGAIDPTKVTKPLAGHFAKAGVTPRRHLVEVRTDDVDQFEAGQELA-ADLFEEGAEVDVTGTTKGKGFAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVSADVENGILAIKGAIPGPKGGIVLVRSA 209          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PETMO (50S ribosomal protein L3 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=rplC PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.578e-39
Identity = 78/171 (45.61%), Postives = 114/171 (66.67%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            Q KT  TDGY+A+QIG+  + ++K  KP +GH +K+ + P+R+L+EFR++++D +E GQK+    IF+EG+ +D+ G + G+G+ G +KR NFR G  THGSK HR LGS G  T P +V+KGKKMPG+ G     I   E+V ID    ++ +KG VPG  G L+ +  A
Sbjct:   35 QKKTVETDGYNAIQIGFEEIPERKANKPLMGHFKKAQVKPLRYLREFRVENVDDYEIGQKIDVT-IFSEGEKIDLIGNSKGRGYSGVMKRWNFRGGENTHGSKFHRGLGSTGMATFPSKVFKGKKMPGQYGNERVTIQNSEVVYIDVQNNLIAVKGGVPGARGGLVTIREA 204          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_BIFLI (50S ribosomal protein L3 OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=rplC PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.578e-39
Identity = 88/173 (50.87%), Postives = 111/173 (64.16%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGS-KSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            T VKTE +DGY AVQ+GY  +   K+TKP  GH  K+G+ P RHL E R   +D FEAGQ+LA  ++F EG  VDV+GTT GKGF G IKR  F+    THGS K+ R+ GS+GA  TP R+ KGK+M GRMG  T     L IV  D +  ++ IKGA+PG  G ++ V  A
Sbjct:   38 TAVKTEESDGYKAVQLGYGAIDPTKVTKPLAGHFAKAGVTPRRHLVEVRTDDVDQFEAGQELA-ADLFEEGAEVDVTGTTKGKGFAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLIIVSADVENGILAIKGAIPGPKGGIVLVRSA 209          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_LEGPH (50S ribosomal protein L3 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=rplC PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.591e-39
Identity = 83/173 (47.98%), Postives = 110/173 (63.58%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            +QVKT A DGY AVQ+     +  K++KP  GH  K+ +       EFR+ S D F  GQ ++  ++F  G  VDVSG T GKGF G +KRHNFR    +HG S+SHR  GSIG   TPGRV+KGKKM G MG     I  LE+VK+D++  +++IKGA+PG PG+ + + PA
Sbjct:   36 SQVKTAANDGYSAVQLTGGTKKSSKVSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGFAGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELVKVDSERNLLLIKGAIPGAPGSRVEIKPA 208          
The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL3_CHLAA1.325e-3948.0050S ribosomal protein L3 OS=Chloroflexus aurantiac... [more]
RL3_FERNB2.261e-3945.6150S ribosomal protein L3 OS=Fervidobacterium nodos... [more]
RL3_BACP22.261e-3949.7150S ribosomal protein L3 OS=Bacillus pumilus (stra... [more]
RL3_LYSSC5.037e-3948.5450S ribosomal protein L3 OS=Lysinibacillus sphaeri... [more]
RL3_COREF5.037e-3943.9350S ribosomal protein L3 OS=Corynebacterium effici... [more]
RL3_BIFLO5.037e-3950.2950S ribosomal protein L3 OS=Bifidobacterium longum... [more]
RL3_BIFLD5.037e-3950.2950S ribosomal protein L3 OS=Bifidobacterium longum... [more]
RL3_PETMO6.578e-3945.6150S ribosomal protein L3 OS=Petrotoga mobilis (str... [more]
RL3_BIFLI6.578e-3950.8750S ribosomal protein L3 OS=Bifidobacterium longum... [more]
RL3_LEGPH8.591e-3947.9850S ribosomal protein L3 OS=Legionella pneumophila... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-016-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGTGTCGTACTTCGCGCCCGACGGAACTGTTGTTCCGGTGA
CTGTAGTTGGGTTCAGAGAAGGGAATATTGTGCACCCAAGTTAAGACTGA
AGCCACTGACGGGTACGACGCCGTTCAGATTGGTTATAGGAGAGTAAGGG
ACAAGAAGCTGACGAAACCTGAGCTGGGTCACTTGCAAAAGTCTGGGTTA
ATACCCATGAGGCATTTGCAGGAGTTTAGGTTACAGTCTATTGATGGGTT
TGAGGCTGGCCAAAAGTTGGCTTTTGAAGAGATTTTTAATGAAGGGGATC
TTGTCGATGTTTCTGGGACTACTATTGGCAAGGGTTTTCAAGGTGGCATT
AAGCGGCACAATTTCAGAAGGGGTGCGATGACCCATGGTTCTAAGAGTCA
TAGACAATTGGGTTCCATTGGTGCTGGAACAACTCCGGGCCGTGTATACA
AGGGGAAGAAGATGCCTGGAAGAATGGGAGGGACAACAAGGAAGATCTGA
AAGCTCGAGATTGTAAAAATTGATAATGACCTTCGTGTTGTAATGATAAA
AGGGGCTGTCCCTGGTAAGCCCGGAAATCTTCTGCGTGTAGCACCAGCTA
AGATTGTTGGGAAGAACATACCAAATAACTAGGTTGGTGCATTATTCTGA
TTGCTTCGCTTTGTGCAGTTCTACATTGGCAAAGAGATTAGTCTTTGTAA
ACCCTTCGTTTTGTGAGTGGAATTTAGACTTTCAGTTAACATCTTGTGAT
GTATCATTGGCTCCTTTGCCAGATACATTTCTATCTCTCTTAGGATTTTG
AATTAAGATTGCCTTCAGCGGAGAAAACCCATATTAATCTTACAAGGGCA
TACACTTTGCCAAAAAACTTTCTTGAGAGAACTCCGCAATTGGGATTTGT
GTCAAACCAA
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