EY757014

Overview
NameEY757014
Unique NameEY757014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_LEGPC (50S ribosomal protein L3 OS=Legionella pneumophila (strain Corby) GN=rplC PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.591e-39
Identity = 83/173 (47.98%), Postives = 110/173 (63.58%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            +QVKT A DGY AVQ+     +  K++KP  GH  K+ +       EFR+ S D F  GQ ++  ++F  G  VDVSG T GKGF G +KRHNFR    +HG S+SHR  GSIG   TPGRV+KGKKM G MG     I  LE+VK+D++  +++IKGA+PG PG+ + + PA
Sbjct:   36 SQVKTAANDGYSAVQLTGGTKKSSKVSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGFAGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELVKVDSERNLLLIKGAIPGAPGSRVEIKPA 208          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_LEGPA (50S ribosomal protein L3 OS=Legionella pneumophila (strain Paris) GN=rplC PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.591e-39
Identity = 83/173 (47.98%), Postives = 110/173 (63.58%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            +QVKT A DGY AVQ+     +  K++KP  GH  K+ +       EFR+ S D F  GQ ++  ++F  G  VDVSG T GKGF G +KRHNFR    +HG S+SHR  GSIG   TPGRV+KGKKM G MG     I  LE+VK+D++  +++IKGA+PG PG+ + + PA
Sbjct:   36 SQVKTAANDGYSAVQLTGGTKKSSKVSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGFAGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELVKVDSERNLLLIKGAIPGAPGSRVEIKPA 208          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_PELPD (50S ribosomal protein L3 OS=Pelobacter propionicus (strain DSM 2379) GN=rplC PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.122e-38
Identity = 80/169 (47.34%), Postives = 110/169 (65.09%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRV 590
            TQ KT + DGY AVQ+G+        +KP LGH  KSG    R+L+EF+  +      G  L  E+ F  GD VDV+GT+IGKGFQG IKR+NFR G  +HGS+ HR  GSIGA  TP RV+K KKMPG++G T   +  L+++++D D  +++IKGA+PG   N++ +
Sbjct:   36 TQKKTASIDGYSAVQVGFDSTPAANASKPMLGHCTKSGQGVFRYLREFKFDAASEMNLGDVLTVEQ-FTAGDFVDVTGTSIGKGFQGVIKRYNFRGGRASHGSRFHRAPGSIGASATPSRVFKNKKMPGQLGNTQVTMQCLQVIRVDADDNLLLIKGAIPGHRNNIVLI 203          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_LEGPL (50S ribosomal protein L3 OS=Legionella pneumophila (strain Lens) GN=rplC PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.465e-38
Identity = 83/173 (47.98%), Postives = 110/173 (63.58%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            +QVKT A DGY AVQ+     +  K++KP  GH  K+ +       EFR+ S D F  GQ ++  ++F  G  VDVSG T GKGF G +KRHNFR    +HG S+SHR  GSIG   TPGRV+KGKKM G MG     I  LE+VK+D++  +++IKGA+PG PG+ + + PA
Sbjct:   36 SQVKTAANDGYSAVQLTGGIKKSSKVSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGFAGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELVKVDSERNLLLIKGAIPGAPGSRVEIKPA 208          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CLOK5 (50S ribosomal protein L3 OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=rplC PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.465e-38
Identity = 77/160 (48.12%), Postives = 109/160 (68.12%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPG 566
            Q KTE  DGY ++QIG+  +R+K + KP  GH  KSG+   R L+EF++ +ID +E GQ++   +IF EGD +DVSG + GKGFQG I+R N +RG M+HGSK HR +GS+GA + P R +K KKMPG MG     +  L++ K+  +  +++IKG VPG
Sbjct:   37 QKKTEEKDGYKSIQIGFGDIREKLVNKPLKGHFAKSGVSLKRFLKEFKVDNIDEYEVGQEIK-ADIFAEGDRIDVSGISKGKGFQGVIRRWNAQRGPMSHGSKFHRAVGSMGASSDPSRTFKNKKMPGHMGNKNTTVLNLQVAKVIPEKNIILIKGGVPG 195          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CLOK1 (50S ribosomal protein L3 OS=Clostridium kluyveri (strain NBRC 12016) GN=rplC PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.465e-38
Identity = 77/160 (48.12%), Postives = 109/160 (68.12%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPG 566
            Q KTE  DGY ++QIG+  +R+K + KP  GH  KSG+   R L+EF++ +ID +E GQ++   +IF EGD +DVSG + GKGFQG I+R N +RG M+HGSK HR +GS+GA + P R +K KKMPG MG     +  L++ K+  +  +++IKG VPG
Sbjct:   37 QKKTEEKDGYKSIQIGFGDIREKLVNKPLKGHFAKSGVSLKRFLKEFKVDNIDEYEVGQEIK-ADIFAEGDRIDVSGISKGKGFQGVIRRWNAQRGPMSHGSKFHRAVGSMGASSDPSRTFKNKKMPGHMGNKNTTVLNLQVAKVIPEKNIILIKGGVPG 195          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CHLAD (50S ribosomal protein L3 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rplC PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.465e-38
Identity = 83/175 (47.43%), Postives = 115/175 (65.71%), Query Frame = 3
Query:   78 LCTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            + TQ++T   DGY AVQ+GY  V  +KLTKP+ GHL+ SG   +R+L+EF        + G+ +  E +F  G  VD+SGT+ G+GF G +KRH FR G  THG S  HR  GSIGAGTTPGRV+KG++M GRMGG    I  LE+V++  +  ++++KG+VPG    LL++  A
Sbjct:   34 IVTQIRTPERDGYSAVQLGYEEVEARKLTKPQQGHLKASGGKMLRYLREFSADDPLAHKPGEVVTVE-LFKPGQKVDISGTSKGRGFAGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQRMAGRMGGDRVTIQNLEVVEVLPEQNLLLVKGSVPGARNGLLQIRKA 207          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_BIFAA (50S ribosomal protein L3 OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=rplC PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.465e-38
Identity = 88/173 (50.87%), Postives = 112/173 (64.74%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGS-KSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            T VK+E +DGY AVQ+GY +V   K+TKP  GH  K+G+ P RHL E R  + + FE GQ+L   E+F EG LVDV+GTT GKGF G IKR  F+    THGS K+ R+ GS+GA  TP R+ KGK+M GRMG  T     L IV  D +  V+ IKGA+PG  G+++ V  A
Sbjct:   38 TAVKSEESDGYKAVQLGYGQVDPTKVTKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEPGQELT-AELFPEGTLVDVTGTTKGKGFAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTALNLTIVSSDVENGVLAIKGAIPGPKGSIVLVRSA 209          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_FINM2 (50S ribosomal protein L3 OS=Finegoldia magna (strain ATCC 29328) GN=rplC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.914e-38
Identity = 77/175 (44.00%), Postives = 117/175 (66.86%), Query Frame = 3
Query:   75 ILCTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            ++ TQ+KT+  +GY+A+Q+GY   ++K + +P  GH  K+G+   +HL+EF++   + F  G ++  + IF +GD+VDV G + GKG QG I RHN+ RG M HGSKSHR  G+  AG+ P RV+KG+K  G+MG     +  L+IVK+DN+  +++IKGAVPG  G ++ V  A
Sbjct:   32 MVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQPMRGHFGKAGVSFKKHLREFKINDDEQFNLGDEIKLD-IFQDGDVVDVIGISKGKGTQGAIVRHNYSRGPMGHGSKSHRVAGARSAGSYPARVFKGRKGSGKMGHDRVTVQNLKIVKVDNERNLLLIKGAVPGNKGGVVTVREA 205          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_DESRM (50S ribosomal protein L3 OS=Desulfotomaculum reducens (strain MI-1) GN=rplC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.914e-38
Identity = 81/171 (47.37%), Postives = 111/171 (64.91%), Query Frame = 3
Query:   78 LCTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRV 590
            L  Q +T   DGY A+Q+G+   R+  L KP  GHL K+G+ P+R L+E ++  ++ F+ GQ++   +IF EG+ VDV GT+ GKGF GGIKRHNF RG M HGSK HR+ GS  A   P R +KG+K+PG  G     +  L++VK+D +  ++ IKGAVPG  G LL V
Sbjct:   34 LVVQKRTPENDGYSAIQLGFGVKRENLLNKPTKGHLNKAGVRPVRFLRELKVDDLEAFQVGQEIK-ADIFAEGEKVDVVGTSKGKGFAGGIKRHNFHRGPMAHGSKYHRRPGS-SAAKGPARTFKGRKLPGHYGVERVTVQNLQVVKVDPERNLLAIKGAVPGPRGGLLLV 202          
The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL3_LEGPC8.591e-3947.9850S ribosomal protein L3 OS=Legionella pneumophila... [more]
RL3_LEGPA8.591e-3947.9850S ribosomal protein L3 OS=Legionella pneumophila... [more]
RL3_PELPD1.122e-3847.3450S ribosomal protein L3 OS=Pelobacter propionicus... [more]
RL3_LEGPL1.465e-3847.9850S ribosomal protein L3 OS=Legionella pneumophila... [more]
RL3_CLOK51.465e-3848.1350S ribosomal protein L3 OS=Clostridium kluyveri (... [more]
RL3_CLOK11.465e-3848.1350S ribosomal protein L3 OS=Clostridium kluyveri (... [more]
RL3_CHLAD1.465e-3847.4350S ribosomal protein L3 OS=Chloroflexus aggregans... [more]
RL3_BIFAA1.465e-3850.8750S ribosomal protein L3 OS=Bifidobacterium adoles... [more]
RL3_FINM21.914e-3844.0050S ribosomal protein L3 OS=Finegoldia magna (stra... [more]
RL3_DESRM1.914e-3847.3750S ribosomal protein L3 OS=Desulfotomaculum reduc... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-016-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGTGTCGTACTTCGCGCCCGACGGAACTGTTGTTCCGGTGA
CTGTAGTTGGGTTCAGAGAAGGGAATATTGTGCACCCAAGTTAAGACTGA
AGCCACTGACGGGTACGACGCCGTTCAGATTGGTTATAGGAGAGTAAGGG
ACAAGAAGCTGACGAAACCTGAGCTGGGTCACTTGCAAAAGTCTGGGTTA
ATACCCATGAGGCATTTGCAGGAGTTTAGGTTACAGTCTATTGATGGGTT
TGAGGCTGGCCAAAAGTTGGCTTTTGAAGAGATTTTTAATGAAGGGGATC
TTGTCGATGTTTCTGGGACTACTATTGGCAAGGGTTTTCAAGGTGGCATT
AAGCGGCACAATTTCAGAAGGGGTGCGATGACCCATGGTTCTAAGAGTCA
TAGACAATTGGGTTCCATTGGTGCTGGAACAACTCCGGGCCGTGTATACA
AGGGGAAGAAGATGCCTGGAAGAATGGGAGGGACAACAAGGAAGATCTGA
AAGCTCGAGATTGTAAAAATTGATAATGACCTTCGTGTTGTAATGATAAA
AGGGGCTGTCCCTGGTAAGCCCGGAAATCTTCTGCGTGTAGCACCAGCTA
AGATTGTTGGGAAGAACATACCAAATAACTAGGTTGGTGCATTATTCTGA
TTGCTTCGCTTTGTGCAGTTCTACATTGGCAAAGAGATTAGTCTTTGTAA
ACCCTTCGTTTTGTGAGTGGAATTTAGACTTTCAGTTAACATCTTGTGAT
GTATCATTGGCTCCTTTGCCAGATACATTTCTATCTCTCTTAGGATTTTG
AATTAAGATTGCCTTCAGCGGAGAAAACCCATATTAATCTTACAAGGGCA
TACACTTTGCCAAAAAACTTTCTTGAGAGAACTCCGCAATTGGGATTTGT
GTCAAACCAA
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