EY757014

Overview
NameEY757014
Unique NameEY757014
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CORJK (50S ribosomal protein L3 OS=Corynebacterium jeikeium (strain K411) GN=rplC PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.914e-38
Identity = 79/173 (45.66%), Postives = 114/173 (65.90%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKS-HRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            TQV+++ TDGY+AVQI +  +  +K+ KP  GH +K+G+ P RH+ E R+     +E GQ +  + IFN+   VDV+GTT GKG+ GG+KRH F      HG+++ HR++GSIG   TPGRV+KGK+M GRMG        L++ K+D +  +++IKGAVPG  G L+ V  A
Sbjct:   40 TQVRSKETDGYEAVQIAFGEIDPRKVNKPAAGHFKKAGVTPRRHVAEIRVADASSYEVGQDVTVD-IFNDVKFVDVTGTTKGKGYAGGMKRHGFAGQGAAHGNQAAHRRVGSIGQAATPGRVFKGKRMAGRMGNDRVTQQNLKLAKVDAESNLLLIKGAVPGVNGGLVVVKTA 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_NATTJ (50S ribosomal protein L3 OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=rplC PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.500e-38
Identity = 79/168 (47.02%), Postives = 113/168 (67.26%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRV 590
            Q K E TDGY+AVQIG+   ++ K  KPE GH +K+G+ P +HL EF L+S++  E GQ+L  E+ F  GD +DV+GT+  KGFQG IKR     G  THGS+ +R  GS+G+     RV+KG+ +PGRMGG T  + +LE+V +D +  ++++KGAVPG    LL++
Sbjct:   37 QKKVEDTDGYNAVQIGFEDKKENKTKKPEKGHFEKAGVNPKKHLTEFELESMENLEVGQELTVEQ-FEVGDQIDVTGTSKSKGFQGTIKRFKHSTGPKTHGSRFYRAPGSLGS-MDISRVFKGQTLPGRMGGNTVTVQRLEVVDVDKENNLLLVKGAVPGPKKGLLKI 202          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_CORDI (50S ribosomal protein L3 OS=Corynebacterium diphtheriae GN=rplC PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.500e-38
Identity = 78/173 (45.09%), Postives = 111/173 (64.16%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKS-HRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            TQ++T  TDGY+A+QI Y  +  +K  KP  GH +K+G+ P RH+ E R+  + G+E GQ +  E IF   + VDV+GTT GKG+ G +KRH F      HG+++ HR++G IGA  TPGRV+KG +M GRMG        L++ KID D  +++IKGA+PG  G ++ V  A
Sbjct:   40 TQIRTVETDGYNAIQIAYGEIDPRKANKPAAGHFKKAGVTPRRHVAEIRMDDVSGYELGQDVTVE-IFEGINFVDVTGTTKGKGYAGAMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGSDRVTTQNLKVQKIDADANLILIKGAIPGVRGGIVTVKTA 211          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_THICR (50S ribosomal protein L3 OS=Thiomicrospira crunogena (strain XCL-2) GN=rplC PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.265e-38
Identity = 85/176 (48.30%), Postives = 115/176 (65.34%), Query Frame = 3
Query:   84 TQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSI---DGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            TQ+K   TDGYDA+Q+ +      +++KPE GH  K+G+   + L EFRL  +   +G E G ++  E+ FN+  +VDVSGTT GKGFQGG+KRHNF+    THG S SHR  GSIG   TPGRV+KGKKM G MG   +    LE+VK+D +  +++IKGA+PG  G+ + V  A
Sbjct:   36 TQIKNNETDGYDAIQVTFGSKHAGRVSKPEAGHYAKAGVEAGQGLWEFRLDDVSEVEGLEPGSEITVEK-FNDVAVVDVSGTTKGKGFQGGVKRHNFKMQDATHGNSVSHRAPGSIGQNQTPGRVFKGKKMAGHMGNVKQTTLNLELVKVDVENSLLLIKGALPGAKGSTVIVRKA 210          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_BACLD (50S ribosomal protein L3 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rplC PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.265e-38
Identity = 81/171 (47.37%), Postives = 114/171 (66.67%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            Q KT   DGY+A+QIG+   R+K   KPE GH+ K+   P R ++E R   +D +E GQ++  + IF+ G++VDV+GT+ GKGFQG IKRH   RG M+HGS+ HR+ GS+G    P RV+KGK +PGRMGG    +  LEIVK+D +  ++++KG VPG   +L+ V  A
Sbjct:   37 QKKTSENDGYEAIQIGFDDKREKLANKPEKGHVAKAETAPKRFVKELRGVDMDAYEVGQEVKVD-IFSNGEIVDVTGTSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEIVKVDAERNLLLVKGNVPGAKKSLVTVKSA 205          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_GEOSW (50S ribosomal protein L3 OS=Geobacillus sp. (strain WCH70) GN=rplC PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.264e-38
Identity = 81/171 (47.37%), Postives = 114/171 (66.67%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPA 599
            Q KT   DGY+A+Q+G+  + +K+  KP++GH  K+   P R ++E R  +ID +E GQ++  + IF EGD+VDV+G + GKGFQG IKRH   RG M HGS+ HR+ GS+GA   P RV+K K++PGRMGG    I  L+IVK+D +  +++IKG VPG    L+ V  A
Sbjct:   37 QKKTIEKDGYEAIQLGFEDISEKRANKPQIGHAAKANTAPKRFIREIRGANIDEYEVGQEVKVD-IFAEGDIVDVTGISKGKGFQGAIKRHGQSRGPMAHGSRYHRRPGSMGA-IAPNRVFKSKELPGRMGGQRVTIQNLKIVKVDPERNLLLIKGNVPGPRKGLVIVKSA 205          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_BACWK (50S ribosomal protein L3 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplC PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.264e-38
Identity = 83/176 (47.16%), Postives = 114/176 (64.77%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            Q KT  TDGY+A+Q+G+   R+K   KPE GH  K+   P R ++E R   +DG E GQ++  E +F  G++VDV+G + GKGFQG IKRH   RG M+HGS+ HR+ GS+G    P RV+KGKK+ GRMGG    I  LEIV++D +  ++++KG VPG   +L+ V  A  V K
Sbjct:   37 QKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAKASTTPKRFIREIRDADVDGLEVGQEVKVE-VFAAGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGP-VAPNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLVKGNVPGAKKSLVVVQGAVKVSK 210          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_BACC2 (50S ribosomal protein L3 OS=Bacillus cereus (strain G9842) GN=rplC PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.264e-38
Identity = 83/176 (47.16%), Postives = 114/176 (64.77%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLLRVAPAKIVGK 614
            Q KT  TDGY+A+Q+G+   R+K   KPE GH  K+   P R ++E R   +DG E GQ++  E +F  G++VDV+G + GKGFQG IKRH   RG M+HGS+ HR+ GS+G    P RV+KGKK+ GRMGG    I  LEIV++D +  ++++KG VPG   +L+ V  A  V K
Sbjct:   37 QKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAKASTTPKRFIREIRDADVDGLEVGQEVKVE-VFAAGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGP-VAPNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLVKGNVPGAKKSLVVVQGAVKVSK 210          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_STAHJ (50S ribosomal protein L3 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rplC PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.273e-38
Identity = 77/168 (45.83%), Postives = 109/168 (64.88%), Query Frame = 3
Query:   87 QVKTEATDGYDAVQIGYRRVR--------DKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPG 566
            Q KTE  DGY+A+Q+G+   +        +K   KP  GH +K+G  P R ++EFR  ++D +E GQ++  +  F  GD++DV+GT+ GKGFQG IKRH   RG M HGS  HR  GS+G  +   RV+KG+KMPGRMGG T  +  LE+V++D +  V+++KG VPG
Sbjct:   37 QKKTEEVDGYNAIQVGFEDKKAYKKDAKSNKYANKPAEGHAKKAGAAPKRFIREFRNVNVDEYEVGQEVTVDT-FEAGDIIDVTGTSKGKGFQGAIKRHGQARGPMAHGSHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTVTVQNLEVVQVDTENNVILVKGNVPG 203          
BLAST of EY757014 vs. ExPASy Swiss-Prot
Match: RL3_MOOTA (50S ribosomal protein L3 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplC PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.273e-38
Identity = 75/164 (45.73%), Postives = 115/164 (70.12%), Query Frame = 3
Query:   93 KTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKI*KLEIVKIDNDLRVVMIKGAVPGKPGNLL 584
            K  +TDGYDAVQ+G+  V+++K+ KP LG+  K+G+ P R+++EFRL++   ++ GQ++   ++F+ G+ VDV+G + GKGF GGIKRH F RG M HGSK HR+ GS+ A   P RV+KG+++PG +G     +  LE+V+ D +  +++IKG+VPG    LL
Sbjct:   39 KETSTDGYDAVQVGFEPVKERKVNKPLLGYFNKAGVTPFRYIREFRLENSGEYQVGQEIK-ADVFSPGEKVDVTGISKGKGFAGGIKRHGFHRGPMEHGSKYHRRPGSL-AAKGPARVFKGRRLPGHLGAVRVTVQGLEVVRNDPERNLLLIKGSVPGPRHGLL 200          
The following BLAST results are available for this feature:
BLAST of EY757014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL3_CORJK1.914e-3845.6650S ribosomal protein L3 OS=Corynebacterium jeikei... [more]
RL3_NATTJ2.500e-3847.0250S ribosomal protein L3 OS=Natranaerobius thermop... [more]
RL3_CORDI2.500e-3845.0950S ribosomal protein L3 OS=Corynebacterium diphth... [more]
RL3_THICR3.265e-3848.3050S ribosomal protein L3 OS=Thiomicrospira crunoge... [more]
RL3_BACLD3.265e-3847.3750S ribosomal protein L3 OS=Bacillus licheniformis... [more]
RL3_GEOSW4.264e-3847.3750S ribosomal protein L3 OS=Geobacillus sp. (strai... [more]
RL3_BACWK4.264e-3847.1650S ribosomal protein L3 OS=Bacillus weihenstephan... [more]
RL3_BACC24.264e-3847.1650S ribosomal protein L3 OS=Bacillus cereus (strai... [more]
RL3_STAHJ7.273e-3845.8350S ribosomal protein L3 OS=Staphylococcus haemoly... [more]
RL3_MOOTA7.273e-3845.7350S ribosomal protein L3 OS=Moorella thermoacetica... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-016-C12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY757014 ID=EY757014; Name=EY757014; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGTGTCGTACTTCGCGCCCGACGGAACTGTTGTTCCGGTGA
CTGTAGTTGGGTTCAGAGAAGGGAATATTGTGCACCCAAGTTAAGACTGA
AGCCACTGACGGGTACGACGCCGTTCAGATTGGTTATAGGAGAGTAAGGG
ACAAGAAGCTGACGAAACCTGAGCTGGGTCACTTGCAAAAGTCTGGGTTA
ATACCCATGAGGCATTTGCAGGAGTTTAGGTTACAGTCTATTGATGGGTT
TGAGGCTGGCCAAAAGTTGGCTTTTGAAGAGATTTTTAATGAAGGGGATC
TTGTCGATGTTTCTGGGACTACTATTGGCAAGGGTTTTCAAGGTGGCATT
AAGCGGCACAATTTCAGAAGGGGTGCGATGACCCATGGTTCTAAGAGTCA
TAGACAATTGGGTTCCATTGGTGCTGGAACAACTCCGGGCCGTGTATACA
AGGGGAAGAAGATGCCTGGAAGAATGGGAGGGACAACAAGGAAGATCTGA
AAGCTCGAGATTGTAAAAATTGATAATGACCTTCGTGTTGTAATGATAAA
AGGGGCTGTCCCTGGTAAGCCCGGAAATCTTCTGCGTGTAGCACCAGCTA
AGATTGTTGGGAAGAACATACCAAATAACTAGGTTGGTGCATTATTCTGA
TTGCTTCGCTTTGTGCAGTTCTACATTGGCAAAGAGATTAGTCTTTGTAA
ACCCTTCGTTTTGTGAGTGGAATTTAGACTTTCAGTTAACATCTTGTGAT
GTATCATTGGCTCCTTTGCCAGATACATTTCTATCTCTCTTAGGATTTTG
AATTAAGATTGCCTTCAGCGGAGAAAACCCATATTAATCTTACAAGGGCA
TACACTTTGCCAAAAAACTTTCTTGAGAGAACTCCGCAATTGGGATTTGT
GTCAAACCAA
back to top