EY756635

Overview
NameEY756635
Unique NameEY756635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756635 vs. ExPASy Swiss-Prot
Match: YK17_SCHPO (Membrane protein PB1A10.07c OS=Schizosaccharomyces pombe GN=SPAPB1A10.07c PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.721e-16
Identity = 67/245 (27.35%), Postives = 102/245 (41.63%), Query Frame = 3
Query:   15 LLVVSLVCYVLTFGFSGLLFHWFTPSGQDCGLNTFFIVMTLILAFIFAVVALHPAVG-----GSILPASVISLYCMYLCYSGLSSEPRDYECNGLHRHSKAXXXXXXXXXXXXXXXXXXYSAVRAGXXXXXXXXXXXXRA-----GGGKPLLPMXXXXXXXXXXXXXPVTYSYAFFHIIFSLASMYSAMLLTGWST-SVGESGK---LVDVG--WPSVWVRILTGWATAALYMWSLVAPILFPDR 701
            + VV LV  +LT+ F              C  N     + L+L    + +++HP +        +  +S++  Y  YL  S L++ P + +CN     +                    YSAVRA              A     G   PL                   Y++ +FHI+F LA+ Y+A LLT W+T SV E+ K    V +G  + +VWV+I+T W    LY+WS +AP+ FP R
Sbjct:  209 MYVVGLVLTILTYVFF---------CASSCSFNQAINTINLLLCIAVSCLSVHPTIQEYNPRSGLAQSSMVMCYTCYLILSALANRPDEGQCNPWGNSASGTREFSKVIGAAFTFFTILYSAVRAASSRESDDSYSYLYADSHDMGVSTPL------EDGSSEEDKHQSDYNFIWFHIVFVLAAFYTASLLTNWNTTSVYENQKNDVFVRIGFSYAAVWVKIITSWVCHGLYVWSCLAPVFFPYR 438          
BLAST of EY756635 vs. ExPASy Swiss-Prot
Match: SERC2_MOUSE (Serine incorporator 2 OS=Mus musculus GN=Serinc2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.493e-14
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 3
Query:  489 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 707
            VTYSY+FFH    LAS++  M LT W  S GE+ K++   W SVWV+I   WA   LY+W+LVAP+L P+R+F
Sbjct:  379 VTYSYSFFHFCLVLASLHVMMTLTNWY-SPGETRKMIST-WTSVWVKICASWAGLFLYLWTLVAPLLLPNRDF 449          
BLAST of EY756635 vs. ExPASy Swiss-Prot
Match: SERC2_BOVIN (Serine incorporator 2 OS=Bos taurus GN=SERINC2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 3
Query:  489 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 707
            VTYSY+FFH+   LAS++  M LT W    GE+ K++   W +VWV+I   W    LY+W+LVAP+L P+R+F
Sbjct:  381 VTYSYSFFHLCLVLASVHIMMTLTNWYRP-GETRKMIST-WTAVWVKICASWTGLLLYLWTLVAPLLLPNRDF 451          
BLAST of EY756635 vs. ExPASy Swiss-Prot
Match: SERIC_NEMVE (Probable serine incorporator OS=Nematostella vectensis GN=serinc PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 3
Query:  489 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 707
            V YSY+F+H +  LAS+Y  M LT W   VG     +     +VWV+I + W    +Y+W+L+AP LFPDR+F
Sbjct:  383 VAYSYSFYHFMLMLASLYIMMTLTNWYKPVGSDFSKLQYSETAVWVKIASSWLCQLIYIWTLLAPALFPDRDF 455          
BLAST of EY756635 vs. ExPASy Swiss-Prot
Match: SERIC_MONBE (Probable serine incorporator OS=Monosiga brevicollis GN=serinc PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.678e-13
Identity = 30/73 (41.10%), Postives = 51/73 (69.86%), Query Frame = 3
Query:  489 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 707
            V YS++FFH+ F++A++Y  M+LT W +S  ++   +  GW SVWV++++ W    LY W+++AP+  PDR+F
Sbjct:  412 VRYSWSFFHLTFAVAALYLMMVLTEWDSS--DADVRIGKGWASVWVQVVSSWVIFLLYGWTMMAPVCLPDRDF 482          
BLAST of EY756635 vs. ExPASy Swiss-Prot
Match: SERC2_HUMAN (Serine incorporator 2 OS=Homo sapiens GN=SERINC2 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 3
Query:  489 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 707
            VTYSY+FFH    LAS++  M LT W    GE+ K++   W +VWV+I   WA   LY+W+LVAP+L  +R+F
Sbjct:  385 VTYSYSFFHFCLVLASLHVMMTLTNWYKP-GETRKMIST-WTAVWVKICASWAGLLLYLWTLVAPLLLRNRDF 455          
BLAST of EY756635 vs. ExPASy Swiss-Prot
Match: SERC1_RAT (Serine incorporator 1 OS=Rattus norvegicus GN=Serinc1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 3
Query:  489 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 707
            VTYSY+FFH +  LAS+Y  M LT W     E  + +   W +VWV+I + W    LY+W+LVAP++  +R+F
Sbjct:  382 VTYSYSFFHFMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452          
BLAST of EY756635 vs. ExPASy Swiss-Prot
Match: SERC1_PONAB (Serine incorporator 1 OS=Pongo abelii GN=SERINC1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 3
Query:  489 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 707
            VTYSY+FFH +  LAS+Y  M LT W     E  + +   W +VWV+I + W    LY+W+LVAP++  +R+F
Sbjct:  382 VTYSYSFFHFMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452          
BLAST of EY756635 vs. ExPASy Swiss-Prot
Match: SERC1_MOUSE (Serine incorporator 1 OS=Mus musculus GN=Serinc1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 3
Query:  489 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 707
            VTYSY+FFH +  LAS+Y  M LT W     E  + +   W +VWV+I + W    LY+W+LVAP++  +R+F
Sbjct:  382 VTYSYSFFHFMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGLVLYVWTLVAPLVLTNRDF 452          
BLAST of EY756635 vs. ExPASy Swiss-Prot
Match: SERC1_HUMAN (Serine incorporator 1 OS=Homo sapiens GN=SERINC1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 32/73 (43.84%), Postives = 46/73 (63.01%), Query Frame = 3
Query:  489 VTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVGWPSVWVRILTGWATAALYMWSLVAPILFPDREF 707
            VTYSY+FFH +  LAS+Y  M LT W     E  + +   W +VWV+I + W    LY+W+LVAP++  +R+F
Sbjct:  382 VTYSYSFFHFMLFLASLYIMMTLTNWYRY--EPSREMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452          
The following BLAST results are available for this feature:
BLAST of EY756635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
YK17_SCHPO2.721e-1627.35Membrane protein PB1A10.07c OS=Schizosaccharomyces... [more]
SERC2_MOUSE1.493e-1452.05Serine incorporator 2 OS=Mus musculus GN=Serinc2 P... [more]
SERC2_BOVIN1.651e-1347.95Serine incorporator 2 OS=Bos taurus GN=SERINC2 PE=... [more]
SERIC_NEMVE3.678e-1343.84Probable serine incorporator OS=Nematostella vecte... [more]
SERIC_MONBE3.678e-1341.10Probable serine incorporator OS=Monosiga brevicoll... [more]
SERC2_HUMAN8.193e-1347.95Serine incorporator 2 OS=Homo sapiens GN=SERINC2 P... [more]
SERC1_RAT1.545e-1143.84Serine incorporator 1 OS=Rattus norvegicus GN=Seri... [more]
SERC1_PONAB1.545e-1143.84Serine incorporator 1 OS=Pongo abelii GN=SERINC1 P... [more]
SERC1_MOUSE1.545e-1143.84Serine incorporator 1 OS=Mus musculus GN=Serinc1 P... [more]
SERC1_HUMAN1.545e-1143.84Serine incorporator 1 OS=Homo sapiens GN=SERINC1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-010-H06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756635 ID=EY756635; Name=EY756635; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGGCCCTATTGGTTGTTTCTCTTGTTTGTTACGTGCTGACA
TTTGGCTTCTCGGGACTTCTTTTCCATTGGTTCACACCATCAGGGCAGGA
TTGTGGGCTCAATACATTCTTCATTGTTATGACCTTGATTCTTGCATTTA
TCTTTGCTGTAGTTGCTCTACATCCCGCTGTGGGTGGCAGCATTTTGCCT
GCTTCAGTAATATCTCTCTACTGCATGTACCTCTGCTACAGTGGACTTTC
AAGTGAACCAAGAGATTACGAATGCAATGGTCTCCACAGGCATTCTAAAG
CTGTCTCTACTGGCAGCCTTACCTTGGGCCTGATTACCACTGTCCTATCA
GTAGTATATTCTGCAGTGCGTGCTGGATCTTCTACAACTCTGCTTTCACC
ACCAAGTTCACCTCGTGCAGGTGGCGGGAAGCCTCTGCTTCCAATGGACA
AGGCTGATGAGGTAGAAGAAAAGGAAAAGGCCAAGCCAGTCACATATTCA
TATGCTTTCTTCCACATTATTTTCTCTCTCGCCAGCATGTATTCTGCAAT
GCTTCTAACTGGGTGGTCAACCTCTGTCGGGGAGAGTGGGAAGCTAGTTG
ACGTGGGTTGGCCATCTGTCTGGGTTAGGATTCTGACTGGGTGGGCAACT
GCAGCTCTCTACATGTGGTCACTGGTTGCTCCAATTCTGTTCCCGGACAG
GGAGTTCTGAGTTCCAAAAATGTTTTAAATACCCCTATATATATTGTGCA
TGTGTGATGCAGCTCCCTAAACGGTAAGCGTATACTGGTTTGGATGCTTG
CTTATCATAAAATTGTAAAATNGTGTCTATCCTAAAGTGNATGAATTGAA
TTGCTTTCAAAGTACTCCATGGAGTGAGGCTATGGCGCTTCTCTAATTCG
TCAAAAAAAAAAAAAAAAGG
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