CX287064

Overview
NameCX287064
Unique NameCX287064
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length540
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH602_PROMT (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain NATL2A) GN=groL2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 43/61 (70.49%), Postives = 53/61 (86.89%), Query Frame = 1 
Query:  355 LQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQ 537
            L+ GVN LA+ + VT+GPKGRNVV+E K+GAP IVNDGVT+AKE++LEDP ENIGAKL+ Q
Sbjct:   15 LEKGVNNLANALKVTIGPKGRNVVIEKKFGAPDIVNDGVTIAKEIDLEDPFENIGAKLIEQ 75
[Close]
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH602_PROMS (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain AS9601) GN=groL2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540
            AK + +N+   A + L+ G++ LA+ V VTLGPKGRNVVLE K+GAP+I+NDGVT+AKE+ELED +EN G  L+RQA
Sbjct:    2 AKRIIYNEQ--ARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQA 76
[Close]
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH602_PROMP (60 kDa chaperonin 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540
            AK + +N+   A + L+ G++ LA+ V VTLGPKGRNVVLE K+GAP+I+NDGVT+AKE+ELED +EN G  L+RQA
Sbjct:    2 AKRIIYNEQ--ARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQA 76
[Close]
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH602_PROMM (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540
            AK + +N+   A + L+ G++ LA+ V VTLGPKGRNVVLE K+GAP+I+NDGVT+AKE+ELED +EN G  L+RQA
Sbjct:    2 AKRIIYNEQ--ARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQA 76
[Close]
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH602_PROMA (60 kDa chaperonin 2 OS=Prochlorococcus marinus GN=groL2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540
            AK + +N+   A + L+ G++ LA+ V VTLGPKGRNVVLE K+GAP+I+NDGVT+AKE+ELED +EN G  L+RQA
Sbjct:    2 AKRIIYNEQ--ARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQA 76
[Close]
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH602_PROM9 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=groL2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540
            AK + +N+   A + L+ G++ LA+ V VTLGPKGRNVVLE K+GAP+I+NDGVT+AKE+ELED +EN G  L+RQA
Sbjct:    2 AKRIIYNEQ--ARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQA 76
[Close]
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH602_PROM5 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9515) GN=groL2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540
            AK + +N+   A + L+ G++ LA+ V VTLGPKGRNVVLE K+GAP+I+NDGVT+AKE+ELED +EN G  L+RQA
Sbjct:    2 AKRIIYNEQ--ARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQA 76
[Close]
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH602_PROM2 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9215) GN=groL2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540
            AK + +N+   A + L+ G++ LA+ V VTLGPKGRNVVLE K+GAP+I+NDGVT+AKE+ELED +EN G  L+RQA
Sbjct:    2 AKRIIYNEQ--ARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQA 76
[Close]
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH602_PROM1 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain NATL1A) GN=groL2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540
            AK + +N+   A + L+ G++ LA+ V VTLGPKGRNVVLE K+GAP+I+NDGVT+AKE+ELED +EN G  L+RQA
Sbjct:    2 AKRIIYNEQ--ARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQA 76
[Close]
BLAST of CX287064 vs. ExPASy Swiss-Prot
Match: CH602_PROM0 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9301) GN=groL2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.918e-19
Identity = 46/77 (59.74%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  310 AKDLHFNKDGYAMKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAKEVELEDPVENIGAKLVRQA 540
            AK + +N+   A + L+ G++ LA+ V VTLGPKGRNVVLE K+GAP+I+NDGVT+AKE+ELED +EN G  L+RQA
Sbjct:    2 AKRIIYNEQ--ARRALERGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELEDHIENTGVALIRQA 76
The following BLAST results are available for this feature:
BLAST of CX287064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_PROMT2.918e-1970.4960 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROMS2.918e-1959.7460 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROMP2.918e-1959.7460 kDa chaperonin 2 OS=Prochlorococcus marinus sub... [more]
CH602_PROMM2.918e-1959.7460 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROMA2.918e-1959.7460 kDa chaperonin 2 OS=Prochlorococcus marinus GN=... [more]
CH602_PROM92.918e-1959.7460 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROM52.918e-1959.7460 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROM22.918e-1959.7460 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROM12.918e-1959.7460 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROM02.918e-1959.7460 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]

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Properties
Property NameValue
Genbank descriptionC01004C07SK Veg1 Citrus clementina cDNA clone C01004C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287064 ID=CX287064; Name=CX287064; organism=Citrus clementina; type=EST; length=540bp
GGGCCCTTTATATTATCAACAAAAGCCACCAACTCTCAGCTCCTACTCTG
CCTGCAGCTCCCCTTATCTCTTTAAACCCTAAAACTCTCGCACTTTCCGC
CGTCTCACAGTTTAAACGAATAAATGGCGTCGACTTTCACTGCCATGTCT
TCCATTAGCTCCATGATTGCTCCTAATGGACGAATGACTGATAAGAAGCT
TGCATCTTCTTCGAACAAATTGTCATCACTTGCTTCCATTTCTTCAAGTT
CATTCGGCAGGAGACAGAGTGTAGCTCTACGCAGGGCCCGCACACCTAAG
ATTTATGCGGCAAAGGACTTGCATTTCAACAAGGATGGATATGCCATGAA
GAAACTTCAAAATGGTGTCAACAAGCTTGCAGATCTAGTTGGAGTTACCC
TTGGTCCCAAGGGCAGGAATGTTGTTCTAGAGAGCAAGTACGGTGCCCCA
AAAATTGTGAATGATGGTGTAACTGTGGCCAAAGAAGTTGAGTTAGAGGA
CCCGGTTGAGAACATTGGTGCTAAATTAGTGAGACAAGCA
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